RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 FRMD6Q96NE9 622 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 PRMT1Q99873 361 aaKnown RBP7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 C11orf84Q9BUA3 381 aaPredicted RBP7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 TM6SF2Q9BZW4 377 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 ZYG11BQ9C0D3 744 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 LACRTQ9GZZ8 138 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 ELOVL6Q9H5J4 265 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 ASTN1O14525 1302 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 TMEM120BA0PK00 339 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 HACD1B0YJ81 288 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 HPGDP15428 266 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 TPH1P17752 444 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 ITGB6P18564 788 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 CD151P48509 253 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 SKP1P63208 163 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 MGAT5Q09328 741 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 INSCQ1MX18 579 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 DLK2Q6UY11 383 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 RBM43Q6ZSC3 357 aaKnown RBP7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 STX12Q86Y82 276 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 OR2W6PQ8NHA6 318 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 WDR48Q8TAF3 677 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 SPATA20Q8TB22 786 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 EPS8L1Q8TE68 723 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 KAT5Q92993 513 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 ZFP42Q96MM3 310 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 NLNQ9BYT8 704 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 ILKAPQ9H0C8 392 aaPredicted RBP7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 CNGB3Q9NQW8 809 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 WHRNQ9P202 907 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 CTNNAL1Q9UBT7 734 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 NDOR1Q9UHB4 597 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 ADAM28Q9UKQ2 775 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 ZNF214Q9UL59 606 aaPredicted RBP7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 RUVBL2Q9Y230 463 aaKnown RBP7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 GNG14A0A1W2PPG7 69 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 MGAT4DA6NG13 374 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 A8MX80 341 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 SNUPNO95149 360 aaKnown RBP7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 HTR1BP28222 390 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 PRIM2P49643 509 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 ILF2Q12905 390 aaKnown RBP7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 CHI3L2Q15782 390 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 C9orf57Q5W0N0 161 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 MCOLN3Q8TDD5 553 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 ZNF333Q96JL9 665 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 RBBP8Q99708 897 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 SIKE1Q9BRV8 207 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 ATP13A3Q9H7F0 1226 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 FANCFQ9NPI8 374 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 ANLNQ9NQW6 1124 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 RGS18Q9NS28 235 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 TRMT13Q9NUP7 481 aaKnown RBP7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 GID8Q9NWU2 228 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 DCDC2Q9UHG0 476 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 VAV3Q9UKW4 847 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 TDRKHQ9Y2W6 561 aaKnown RBP7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 ERI2A8K979 691 aaKnown RBP7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 VSTM5A8MXK1 200 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 F8W810 466 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 PPP1R11O60927 126 aaPredicted RBP7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 CHN1P15882 459 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 ITGA9Q13797 1035 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 CSHL1Q14406 222 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 HIC1Q14526 733 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 SH3D19Q5HYK7 790 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 MFSD7Q6UXD7 560 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 DNAAF5Q86Y56 855 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 ZNF614Q8N883 585 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 GLIS3Q8NEA6 775 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 OXCT2Q9BYC2 517 aaPredicted RBP7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 GOLGA2P5Q9HBQ8 144 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 RAD18Q9NS91 495 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 COMMD8Q9NX08 183 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 TAS2R13Q9NYV9 303 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 TBC1D14Q9P2M4 693 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 DEC1Q9P2X7 70 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 ZNF510Q9Y2H8 683 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 SLC45A1Q9Y2W3 748 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 SIGLEC16A6NMB1 481 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 CAPZA2P47755 286 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 FSTL1Q12841 308 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 C15orf59Q2T9L4 293 aaPredicted RBP7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 FUT10Q6P4F1 479 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 NANOGNBQ7Z5D8 188 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 TRIML2Q8N7C3 387 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 ACTRT1Q8TDG2 376 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 GPR152Q8TDT2 470 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 RIPOR3Q96MK2 946 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 SHOC2Q9UQ13 582 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 A0A0B4J269 797 aa7.02□□□□□ -1.29
SRGAP1-206ENST00000543397 DDX3XO00571 662 aaKnown RBP eCLIP7.02□□□□□ -1.29
SRGAP1-206ENST00000543397 SKAP2O75563 359 aaPredicted RBP7.02□□□□□ -1.29
SRGAP1-206ENST00000543397 ENO1P06733 434 aaKnown RBP7.02□□□□□ -1.29
SRGAP1-206ENST00000543397 CLTBP09497 229 aa7.02□□□□□ -1.29
SRGAP1-206ENST00000543397 ACRP10323 421 aa7.02□□□□□ -1.29
SRGAP1-206ENST00000543397 PCNAP12004 261 aa7.02□□□□□ -1.29
SRGAP1-206ENST00000543397 CNTFP26441 200 aa7.02□□□□□ -1.29
SRGAP1-206ENST00000543397 NPY2RP49146 381 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms