RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	LINC00597	Q9H2U6	94 aa		6.72	□□□□□ -1.33
CIT-213	ENST00000543324	CD248	Q9HCU0	757 aa		6.72	□□□□□ -1.33
CIT-213	ENST00000543324	TRPC7	Q9HCX4	862 aa		6.72	□□□□□ -1.33
CIT-213	ENST00000543324	DMAP1	Q9NPF5	467 aa	Predicted RBP	6.72	□□□□□ -1.33
CIT-213	ENST00000543324	CYLD	Q9NQC7	956 aa		6.72	□□□□□ -1.33
CIT-213	ENST00000543324	KRT82	Q9NSB4	513 aa		6.72	□□□□□ -1.33
CIT-213	ENST00000543324	DUS2	Q9NX74	493 aa	Known RBP	6.72	□□□□□ -1.33
CIT-213	ENST00000543324	TRPM5	Q9NZQ8	1165 aa		6.72	□□□□□ -1.33
CIT-213	ENST00000543324	ESPL1	Q14674	2120 aa		6.71	□□□□□ -1.33
CIT-213	ENST00000543324	E2F8	A0AVK6	867 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	ANTXRL	A6NF34	631 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	EIF3CL	B5ME19	914 aa	Known RBP	6.71	□□□□□ -1.34
CIT-213	ENST00000543324		K7EQS6	105 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	CBX4	O00257	560 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	HOXC11	O43248	304 aa	Predicted RBP	6.71	□□□□□ -1.34
CIT-213	ENST00000543324	CALU	O43852	315 aa	Predicted RBP	6.71	□□□□□ -1.34
CIT-213	ENST00000543324	NFATC1	O95644	943 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	TRIM49	P0CI25	452 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	TRIM49C	P0CI26	452 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	CCDC130	P13994	396 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	GNLY	P22749	145 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	ANXA13	P27216	316 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	MAOB	P27338	520 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	YWHAQ	P27348	245 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	GTF2H1	P32780	548 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	KIR2DL1	P43626	348 aa	Predicted RBP	6.71	□□□□□ -1.34
CIT-213	ENST00000543324	LSS	P48449	732 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	IFNAR2	P48551	515 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	NDST1	P52848	882 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	MYL5	Q02045	173 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	BIRC3	Q13489	604 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	INAVA	Q3KP66	663 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	WDR45B	Q5MNZ6	344 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	LCE2D	Q5TA82	110 aa	Predicted RBP	6.71	□□□□□ -1.34
CIT-213	ENST00000543324	RHBDF2	Q6PJF5	856 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	IGF2-AS	Q6U949	168 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	SCARA5	Q6ZMJ2	495 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	MMS22L	Q6ZRQ5	1243 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	CLEC20A	Q6ZU45	233 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	GPRIN1	Q7Z2K8	1008 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	CCDC91	Q7Z6B0	441 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	ACOT1	Q86TX2	421 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	PACS2	Q86VP3	889 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	C12orf40	Q86WS4	652 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	DDX42	Q86XP3	938 aa	Known RBP eCLIP	6.71	□□□□□ -1.34
CIT-213	ENST00000543324	SFTPA1	Q8IWL2	248 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	ADGRG2	Q8IZP9	1017 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	ZCCHC9	Q8N567	271 aa	Known RBP	6.71	□□□□□ -1.34
CIT-213	ENST00000543324	CCDC33	Q8N5R6	958 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	UBR7	Q8N806	425 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	HMGB4	Q8WW32	186 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	DNASE2B	Q8WZ79	361 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	SEMA4D	Q92854	862 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	WBP2	Q969T9	261 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	OTUB2	Q96DC9	234 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	LURAP1	Q96LR2	239 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	SLITRK1	Q96PX8	696 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	EIF3C	Q99613	913 aa	Known RBP	6.71	□□□□□ -1.34
CIT-213	ENST00000543324	NAA15	Q9BXJ9	866 aa	Known RBP	6.71	□□□□□ -1.34
CIT-213	ENST00000543324	NIF3L1	Q9GZT8	377 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	DEF6	Q9H4E7	631 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	CYP3A43	Q9HB55	503 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	TMEM8A	Q9HCN3	771 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	OSER1	Q9NX31	292 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	CDC23	Q9UJX2	597 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	COQ4	Q9Y3A0	265 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	CPQ	Q9Y646	472 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	USP3	Q9Y6I4	520 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	ATP8B3	O60423	1300 aa		6.71	□□□□□ -1.34
CIT-213	ENST00000543324	MN1	Q10571	1320 aa	Predicted RBP	6.71	□□□□□ -1.34
CIT-213	ENST00000543324	CLGN	O14967	610 aa		6.7	□□□□□ -1.34
CIT-213	ENST00000543324	PMM2	O15305	246 aa		6.7	□□□□□ -1.34
CIT-213	ENST00000543324	SLC16A3	O15427	465 aa	Known RBP	6.7	□□□□□ -1.34
CIT-213	ENST00000543324	PAPSS1	O43252	624 aa	Predicted RBP	6.7	□□□□□ -1.34
CIT-213	ENST00000543324	KIF1C	O43896	1103 aa	Known RBP	6.7	□□□□□ -1.34
CIT-213	ENST00000543324	SHOX2	O60902	331 aa	Predicted RBP	6.7	□□□□□ -1.34
CIT-213	ENST00000543324	PHACTR2	O75167	634 aa		6.7	□□□□□ -1.34
CIT-213	ENST00000543324	AP1G2	O75843	785 aa		6.7	□□□□□ -1.34
CIT-213	ENST00000543324	NADK	O95544	446 aa	Predicted RBP	6.7	□□□□□ -1.34
CIT-213	ENST00000543324	P4HA1	P13674	534 aa		6.7	□□□□□ -1.34
CIT-213	ENST00000543324	FECH	P22830	423 aa		6.7	□□□□□ -1.34
CIT-213	ENST00000543324	MCM3	P25205	808 aa		6.7	□□□□□ -1.34
CIT-213	ENST00000543324	PSMC2	P35998	433 aa	Known RBP	6.7	□□□□□ -1.34
CIT-213	ENST00000543324	USP8	P40818	1118 aa		6.7	□□□□□ -1.34
CIT-213	ENST00000543324	PIK3CA	P42336	1068 aa		6.7	□□□□□ -1.34
CIT-213	ENST00000543324	PRCP	P42785	496 aa		6.7	□□□□□ -1.34
CIT-213	ENST00000543324	GCLM	P48507	274 aa		6.7	□□□□□ -1.34
CIT-213	ENST00000543324	PMS1	P54277	932 aa	Known RBP	6.7	□□□□□ -1.34
CIT-213	ENST00000543324	UBASH3A	P57075	661 aa		6.7	□□□□□ -1.34
CIT-213	ENST00000543324	INSM1	Q01101	510 aa	Predicted RBP	6.7	□□□□□ -1.34
CIT-213	ENST00000543324	ILK	Q13418	452 aa		6.7	□□□□□ -1.34
CIT-213	ENST00000543324	PNOC	Q13519	176 aa		6.7	□□□□□ -1.34
CIT-213	ENST00000543324	DHCR24	Q15392	516 aa		6.7	□□□□□ -1.34
CIT-213	ENST00000543324	CT47A1	Q5JQC4	288 aa	Predicted RBP	6.7	□□□□□ -1.34
CIT-213	ENST00000543324	RAB41	Q5JT25	222 aa		6.7	□□□□□ -1.34
CIT-213	ENST00000543324	ZNF658	Q5TYW1	1059 aa	Predicted RBP	6.7	□□□□□ -1.34
CIT-213	ENST00000543324	WDR93	Q6P2C0	686 aa		6.7	□□□□□ -1.34
CIT-213	ENST00000543324	KLHDC10	Q6PID8	442 aa		6.7	□□□□□ -1.34
CIT-213	ENST00000543324	FOXR2	Q6PJQ5	311 aa		6.7	□□□□□ -1.34
CIT-213	ENST00000543324	LRRC31	Q6UY01	552 aa		6.7	□□□□□ -1.34

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