RNA–Protein interactions for RNA: ENST00000542113.1

NKRF-204, Transcript of NFKB repressing factor, humanhuman

TSL 3 BASIC

Gene NKRF, Length 3,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-204ENST00000542113 RBM47A0AV96 593 aaKnown RBP6.94□□□□□ -1.3
NKRF-204ENST00000542113 CITO14578 2027 aa6.94□□□□□ -1.3
NKRF-204ENST00000542113 ITGAXP20702 1163 aa6.94□□□□□ -1.3
NKRF-204ENST00000542113 POLE2P56282 527 aa6.94□□□□□ -1.3
NKRF-204ENST00000542113 KLF10Q13118 480 aa6.94□□□□□ -1.3
NKRF-204ENST00000542113 MPP3Q13368 585 aa6.94□□□□□ -1.3
NKRF-204ENST00000542113 TRIP10Q15642 601 aa6.94□□□□□ -1.3
NKRF-204ENST00000542113 ANO4Q32M45 955 aa6.94□□□□□ -1.3
NKRF-204ENST00000542113 LIN52Q52LA3 116 aa6.94□□□□□ -1.3
NKRF-204ENST00000542113 RNF220Q5VTB9 566 aa6.94□□□□□ -1.3
NKRF-204ENST00000542113 ARMC3Q5W041 872 aa6.94□□□□□ -1.3
NKRF-204ENST00000542113 NAPEPLDQ6IQ20 393 aa6.94□□□□□ -1.3
NKRF-204ENST00000542113 TMEM135Q86UB9 458 aa6.94□□□□□ -1.3
NKRF-204ENST00000542113 TOP6BLQ8N6T0 577 aa6.94□□□□□ -1.3
NKRF-204ENST00000542113 RP9Q8TA86 221 aaKnown RBP6.94□□□□□ -1.3
NKRF-204ENST00000542113 GABPB2Q8TAK5 448 aaPredicted RBP6.94□□□□□ -1.3
NKRF-204ENST00000542113 GDPD5Q8WTR4 605 aa6.94□□□□□ -1.3
NKRF-204ENST00000542113 PPP1R16BQ96T49 567 aa6.94□□□□□ -1.3
NKRF-204ENST00000542113 HNRNPABQ99729 332 aaKnown RBP6.94□□□□□ -1.3
NKRF-204ENST00000542113 PDGFDQ9GZP0 370 aaPredicted RBP6.94□□□□□ -1.3
NKRF-204ENST00000542113 NMRAL1Q9HBL8 299 aa6.94□□□□□ -1.3
NKRF-204ENST00000542113 CASS4Q9NQ75 786 aa6.94□□□□□ -1.3
NKRF-204ENST00000542113 RBPJLQ9UBG7 517 aa6.94□□□□□ -1.3
NKRF-204ENST00000542113 VPS28Q9UK41 221 aa6.94□□□□□ -1.3
NKRF-204ENST00000542113 PSMD13Q9UNM6 376 aa6.94□□□□□ -1.3
NKRF-204ENST00000542113 RGSL1A5PLK6 1076 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 HDAC3O15379 428 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 CABYRO75952 493 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 WARSP23381 471 aaKnown RBP6.93□□□□□ -1.3
NKRF-204ENST00000542113 ADORA2AP29274 412 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 NUMBP49757 651 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 TPI1P60174 286 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 ZNF33AQ06730 810 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 SCAPQ12770 1279 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 DPYSQ14117 519 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 MAP7Q14244 749 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 MMEL1Q495T6 779 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 ANKRD20A4Q4UJ75 823 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 DCAF6Q58WW2 860 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 SEL1L3Q68CR1 1132 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 ZNF467Q7Z7K2 595 aaPredicted RBP6.93□□□□□ -1.3
NKRF-204ENST00000542113 SLC25A41Q8N5S1 370 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 POU5F2Q8N7G0 328 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 TDRD5Q8NAT2 981 aaKnown RBP6.93□□□□□ -1.3
NKRF-204ENST00000542113 URGCPQ8TCY9 931 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 SLC2A14Q8TDB8 520 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 NT5C3BQ969T7 300 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 ZBTB10Q96DT7 871 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 NPY6RQ99463 290 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 EPAS1Q99814 870 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 DUSP16Q9BY84 665 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 GBA3Q9H227 469 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 EPB41L1Q9H4G0 881 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 COG4Q9H9E3 785 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 ELP3Q9H9T3 547 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 CYP4F11Q9HBI6 524 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 TUBGCP4Q9UGJ1 667 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 BRCA2P51587 3418 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 BRCA1P38398 1863 aaKnown RBP6.93□□□□□ -1.3
NKRF-204ENST00000542113 M0QYT0 321 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 PIRO00625 290 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 ZNF195O14628 629 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 DCXO43602 365 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 CREB3O43889 395 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 F9P00740 461 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 ERVK-10P10266 1014 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 RAG1P15918 1043 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 NPR3P17342 541 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 TFE3P19532 575 aaPredicted RBP6.93□□□□□ -1.3
NKRF-204ENST00000542113 SERPINB5P36952 375 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 CRADDP78560 199 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 PPIDQ08752 370 aaKnown RBP6.93□□□□□ -1.3
NKRF-204ENST00000542113 ADIGQ0VDE8 80 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 CCNIQ14094 377 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 HSP90AA5PQ58FG0 334 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 THEMIS2Q5TEJ8 643 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 LIPMQ5VYY2 423 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 BNC2Q6ZN30 1099 aaPredicted RBP6.93□□□□□ -1.3
NKRF-204ENST00000542113 RAPH1Q70E73 1250 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 CLEC14AQ86T13 490 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 RSPH3Q86UC2 560 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 PIGZQ86VD9 579 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 KCNMB4Q86W47 210 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 KYQ8NBH2 561 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 PYDC1Q8WXC3 89 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 CCDC124Q96CT7 223 aaKnown RBP6.93□□□□□ -1.3
NKRF-204ENST00000542113 SLC2A13Q96QE2 648 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 TRIM56Q9BRZ2 755 aaKnown RBP6.93□□□□□ -1.3
NKRF-204ENST00000542113 DTNAQ9Y4J8 743 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 MGAMO43451 1857 aa6.93□□□□□ -1.3
NKRF-204ENST00000542113 DCLK1O15075 740 aa6.92□□□□□ -1.3
NKRF-204ENST00000542113 AP1G1O43747 822 aa6.92□□□□□ -1.3
NKRF-204ENST00000542113 PEX10O60683 326 aa6.92□□□□□ -1.3
NKRF-204ENST00000542113 RECQL4O94761 1208 aa6.92□□□□□ -1.3
NKRF-204ENST00000542113 TOP3BO95985 862 aaKnown RBP6.92□□□□□ -1.3
NKRF-204ENST00000542113 KCNE1P15382 129 aa6.92□□□□□ -1.3
NKRF-204ENST00000542113 PPARGP37231 505 aaPredicted RBP6.92□□□□□ -1.3
NKRF-204ENST00000542113 MLH1P40692 756 aa6.92□□□□□ -1.3
NKRF-204ENST00000542113 CHN2P52757 468 aa6.92□□□□□ -1.3
NKRF-204ENST00000542113 ATXN1P54253 815 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms