RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 GFPT1Q06210 699 aaPredicted RBP10.01□□□□□ -0.81
YBX3-212ENST00000542002 MTA1Q13330 715 aa10.01□□□□□ -0.81
YBX3-212ENST00000542002 ZNF177Q13360 481 aaPredicted RBP10.01□□□□□ -0.81
YBX3-212ENST00000542002 CAMK2GQ13555 558 aaPredicted RBP10.01□□□□□ -0.81
YBX3-212ENST00000542002 CCDC6Q16204 474 aa10.01□□□□□ -0.81
YBX3-212ENST00000542002 USP39Q53GS9 565 aaKnown RBP10.01□□□□□ -0.81
YBX3-212ENST00000542002 TDRD12Q587J7 1177 aaKnown RBP10.01□□□□□ -0.81
YBX3-212ENST00000542002 C9orf64Q5T6V5 341 aa10.01□□□□□ -0.81
YBX3-212ENST00000542002 TTC39BQ5VTQ0 682 aaPredicted RBP10.01□□□□□ -0.81
YBX3-212ENST00000542002 SCYL2Q6P3W7 929 aa10.01□□□□□ -0.81
YBX3-212ENST00000542002 DCUN1D2Q6PH85 259 aa10.01□□□□□ -0.81
YBX3-212ENST00000542002 SARM1Q6SZW1 724 aa10.01□□□□□ -0.81
YBX3-212ENST00000542002 CYP4V2Q6ZWL3 525 aaPredicted RBP10.01□□□□□ -0.81
YBX3-212ENST00000542002 TMC6Q7Z403 805 aa10.01□□□□□ -0.81
YBX3-212ENST00000542002 TFAP2DQ7Z6R9 452 aa10.01□□□□□ -0.81
YBX3-212ENST00000542002 NLRP14Q86W24 1093 aa10.01□□□□□ -0.81
YBX3-212ENST00000542002 TMPRSS6Q8IU80 811 aa10.01□□□□□ -0.81
YBX3-212ENST00000542002 DRC7Q8IY82 874 aa10.01□□□□□ -0.81
YBX3-212ENST00000542002 DEFB119Q8N690 84 aa10.01□□□□□ -0.81
YBX3-212ENST00000542002 OR8K1Q8NGG5 319 aa10.01□□□□□ -0.81
YBX3-212ENST00000542002 FRS2Q8WU20 508 aa10.01□□□□□ -0.81
YBX3-212ENST00000542002 RUBCNQ92622 972 aa10.01□□□□□ -0.81
YBX3-212ENST00000542002 ARHGEF26Q96DR7 871 aa10.01□□□□□ -0.81
YBX3-212ENST00000542002 BTBD6Q96KE9 485 aa10.01□□□□□ -0.81
YBX3-212ENST00000542002 PEBP4Q96S96 227 aa10.01□□□□□ -0.81
YBX3-212ENST00000542002 PRDM16Q9HAZ2 1276 aa10.01□□□□□ -0.81
YBX3-212ENST00000542002 MYO1AQ9UBC5 1043 aa10.01□□□□□ -0.81
YBX3-212ENST00000542002 PPARGC1AQ9UBK2 798 aaKnown RBP10.01□□□□□ -0.81
YBX3-212ENST00000542002 FZD10Q9ULW2 581 aa10.01□□□□□ -0.81
YBX3-212ENST00000542002 PAXBP1Q9Y5B6 917 aa10.01□□□□□ -0.81
YBX3-212ENST00000542002 DNAH14Q0VDD8 3507 aa10.01□□□□□ -0.81
YBX3-212ENST00000542002 FANCMQ8IYD8 2048 aa10□□□□□ -0.81
YBX3-212ENST00000542002 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10□□□□□ -0.81
YBX3-212ENST00000542002 IGHV1OR15-9A0A0B4J2B8 117 aa10□□□□□ -0.81
YBX3-212ENST00000542002 K7ERQ8 282 aa10□□□□□ -0.81
YBX3-212ENST00000542002 SYNCRIPO60506 623 aaKnown RBP10□□□□□ -0.81
YBX3-212ENST00000542002 SNAP91O60641 907 aa10□□□□□ -0.81
YBX3-212ENST00000542002 MFAP3LO75121 409 aa10□□□□□ -0.81
YBX3-212ENST00000542002 SIN3BO75182 1162 aa10□□□□□ -0.81
YBX3-212ENST00000542002 LRIG2O94898 1065 aa10□□□□□ -0.81
YBX3-212ENST00000542002 CYP1A2P05177 515 aa10□□□□□ -0.81
YBX3-212ENST00000542002 TPM3P06753 285 aa10□□□□□ -0.81
YBX3-212ENST00000542002 PSMA2P25787 234 aa10□□□□□ -0.81
YBX3-212ENST00000542002 PTGER3P43115 390 aa10□□□□□ -0.81
YBX3-212ENST00000542002 GALCP54803 685 aa10□□□□□ -0.81
YBX3-212ENST00000542002 NRG1Q02297 640 aaPredicted RBP10□□□□□ -0.81
YBX3-212ENST00000542002 SPEM2Q0P670 501 aa10□□□□□ -0.81
YBX3-212ENST00000542002 SCAPQ12770 1279 aa10□□□□□ -0.81
YBX3-212ENST00000542002 SEMA3BQ13214 749 aa10□□□□□ -0.81
YBX3-212ENST00000542002 SLC12A1Q13621 1099 aa10□□□□□ -0.81
YBX3-212ENST00000542002 CA9Q16790 459 aa10□□□□□ -0.81
YBX3-212ENST00000542002 HNRNPA1L2Q32P51 320 aaKnown RBP10□□□□□ -0.81
YBX3-212ENST00000542002 CCDC122Q5T0U0 273 aa10□□□□□ -0.81
YBX3-212ENST00000542002 LAIR1Q6GTX8 287 aa10□□□□□ -0.81
YBX3-212ENST00000542002 ALKBH5Q6P6C2 394 aaKnown RBP10□□□□□ -0.81
YBX3-212ENST00000542002 LRRC31Q6UY01 552 aa10□□□□□ -0.81
YBX3-212ENST00000542002 SLFN11Q7Z7L1 901 aa10□□□□□ -0.81
YBX3-212ENST00000542002 CPNE8Q86YQ8 564 aa10□□□□□ -0.81
YBX3-212ENST00000542002 TMEFF1Q8IYR6 380 aa10□□□□□ -0.81
YBX3-212ENST00000542002 ZNF557Q8N988 423 aaPredicted RBP10□□□□□ -0.81
YBX3-212ENST00000542002 OR7D4Q8NG98 312 aa10□□□□□ -0.81
YBX3-212ENST00000542002 PTPRN2Q92932 1015 aa10□□□□□ -0.81
YBX3-212ENST00000542002 NTAN1Q96AB6 310 aa10□□□□□ -0.81
YBX3-212ENST00000542002 ZNF653Q96CK0 615 aa10□□□□□ -0.81
YBX3-212ENST00000542002 FAM129BQ96TA1 746 aa10□□□□□ -0.81
YBX3-212ENST00000542002 PACSIN1Q9BY11 444 aa10□□□□□ -0.81
YBX3-212ENST00000542002 TRIM5Q9C035 493 aa10□□□□□ -0.81
YBX3-212ENST00000542002 ZYG11BQ9C0D3 744 aa10□□□□□ -0.81
YBX3-212ENST00000542002 ARRDC1-AS1Q9H2J1 176 aa10□□□□□ -0.81
YBX3-212ENST00000542002 SMOC1Q9H4F8 434 aa10□□□□□ -0.81
YBX3-212ENST00000542002 ITM2CQ9NQX7 267 aa10□□□□□ -0.81
YBX3-212ENST00000542002 ABHD10Q9NUJ1 306 aa10□□□□□ -0.81
YBX3-212ENST00000542002 TMEM51Q9NW97 253 aa10□□□□□ -0.81
YBX3-212ENST00000542002 GPATCH2LQ9NWQ4 482 aa10□□□□□ -0.81
YBX3-212ENST00000542002 PCSK1NQ9UHG2 260 aa10□□□□□ -0.81
YBX3-212ENST00000542002 CYP8B1Q9UNU6 501 aa10□□□□□ -0.81
YBX3-212ENST00000542002 ACTL7AQ9Y615 435 aa10□□□□□ -0.81
YBX3-212ENST00000542002 RNF103O00237 685 aa9.99□□□□□ -0.81
YBX3-212ENST00000542002 SMAD6O43541 496 aaKnown RBP9.99□□□□□ -0.81
YBX3-212ENST00000542002 ZNF821O75541 412 aaPredicted RBP9.99□□□□□ -0.81
YBX3-212ENST00000542002 ZMPSTE24O75844 475 aa9.99□□□□□ -0.81
YBX3-212ENST00000542002 CD160O95971 181 aa9.99□□□□□ -0.81
YBX3-212ENST00000542002 ASLP04424 464 aa9.99□□□□□ -0.81
YBX3-212ENST00000542002 RETP07949 1114 aa9.99□□□□□ -0.81
YBX3-212ENST00000542002 SRPRAP08240 638 aaKnown RBP9.99□□□□□ -0.81
YBX3-212ENST00000542002 IL1R2P27930 398 aa9.99□□□□□ -0.81
YBX3-212ENST00000542002 MIPP30301 263 aa9.99□□□□□ -0.81
YBX3-212ENST00000542002 OR1E1P30953 314 aa9.99□□□□□ -0.81
YBX3-212ENST00000542002 ACVRL1P37023 503 aa9.99□□□□□ -0.81
YBX3-212ENST00000542002 TPMTP51580 245 aa9.99□□□□□ -0.81
YBX3-212ENST00000542002 ZNF75DP51815 510 aa9.99□□□□□ -0.81
YBX3-212ENST00000542002 RPS14P62263 151 aaKnown RBP9.99□□□□□ -0.81
YBX3-212ENST00000542002 ARL13BQ3SXY8 428 aa9.99□□□□□ -0.81
YBX3-212ENST00000542002 PMS2CLQ68D20 193 aa9.99□□□□□ -0.81
YBX3-212ENST00000542002 RWDD4Q6NW29 188 aaKnown RBP9.99□□□□□ -0.81
YBX3-212ENST00000542002 PPP1R2P3Q6NXS1 205 aa9.99□□□□□ -0.81
YBX3-212ENST00000542002 KIAA1324Q6UXG2 1013 aaKnown RBP9.99□□□□□ -0.81
YBX3-212ENST00000542002 LINGO4Q6UY18 593 aa9.99□□□□□ -0.81
YBX3-212ENST00000542002 SETD3Q86TU7 594 aaPredicted RBP9.99□□□□□ -0.81
YBX3-212ENST00000542002 METTL3Q86U44 580 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms