RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 AK5Q9Y6K8 562 aa9.03□□□□□ -0.96
CLSTN3-212ENST00000541770 URB1O60287 2271 aaKnown RBP9.02□□□□□ -0.96
CLSTN3-212ENST00000541770 CKAP5Q14008 2032 aa9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 YJEFN3A6XGL0 299 aa9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 AKR1B15C9JRZ8 316 aaPredicted RBP9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 E7ENQ6 273 aa9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 C1QL1O75973 258 aa9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 LTFP02788 710 aa9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 ERBB2P04626 1255 aa9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 SERPING1P05155 500 aa9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 GLI1P08151 1106 aa9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 GZMAP12544 262 aa9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 RARGP13631 454 aa9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 JUPP14923 745 aa9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 TNFAIP3P21580 790 aa9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 PRKCHP24723 683 aa9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 GRK6P43250 576 aa9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 CCT8P50990 548 aa9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 AFF3P51826 1226 aaKnown RBP9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 CLDN6P56747 220 aa9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 GSCP56915 257 aaPredicted RBP9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 CAMK2BQ13554 666 aa9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 ZNF234Q14588 700 aa9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 GEN1Q17RS7 908 aa9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 C10orf120Q5SQS8 335 aa9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 C6orf118Q5T5N4 469 aa9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 NAA35Q5VZE5 725 aa9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 BSPRYQ5W0U4 402 aa9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 SERPINA13PQ6UXR4 307 aa9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 ZNF571Q7Z3V5 609 aaPredicted RBP9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 METTL3Q86U44 580 aaKnown RBP9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 PHF13Q86YI8 300 aaPredicted RBP9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 SLC30A5Q8TAD4 765 aa9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 CPA5Q8WXQ8 436 aa9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 GOLGA1Q92805 767 aa9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 NXPE2Q96DL1 559 aa9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 C18orf8Q96DM3 657 aa9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 FCRL3Q96P31 734 aaPredicted RBP9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 C6orf106Q9H6K1 298 aaPredicted RBP9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 ABCC13Q9NSE7 274 aa9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 OLA1Q9NTK5 396 aaKnown RBP9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 ABHD10Q9NUJ1 306 aa9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 THAP10Q9P2Z0 257 aaPredicted RBP9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 TJP2Q9UDY2 1190 aa9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 FTSJ1Q9UET6 329 aa9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 RASAL2Q9UJF2 1139 aa9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 NAGPAQ9UK23 515 aa9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 ANKRD6Q9Y2G4 727 aa9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 SLCO1B1Q9Y6L6 691 aa9.02□□□□□ -0.97
CLSTN3-212ENST00000541770 ITPR1Q14643 2758 aa9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 FREM2Q5SZK8 3169 aa9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 SSU72P8A0A1W2PR75 194 aa9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 H0Y8X5 98 aa9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 LOC400499M0QZD8 3231 aa9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 PIK3R2O00459 728 aa9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 CAPN9O14815 690 aa9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 ATXN7O15265 892 aaPredicted RBP9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 RRP8O43159 456 aaKnown RBP9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 GREM1O60565 184 aa9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 DKK1O94907 266 aa9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 FSBPO95073 299 aa9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 ADCY5O95622 1261 aa9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 CYBBP04839 570 aa9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 SKILP12757 684 aa9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 PLA2G2AP14555 144 aa9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 MMP8P22894 467 aa9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 HNF1BP35680 557 aa9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 EIF2S3P41091 472 aaKnown RBP9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 NSFP46459 744 aaKnown RBP9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 COPAP53621 1224 aa9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 ADKP55263 362 aaKnown RBP9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 CDK17Q00537 523 aa9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 SLC6A3Q01959 620 aa9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 C1QBPQ07021 282 aaKnown RBP9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 SMAD1Q15797 465 aaKnown RBP9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 TSR1Q2NL82 804 aaKnown RBP9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 INAVAQ3KP66 663 aa9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 TDRD12Q587J7 1177 aaKnown RBP9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 EFHC1Q5JVL4 640 aa9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 OR6B2Q6IFH4 312 aa9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 ACAD10Q6JQN1 1059 aa9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 MSANTD2Q6P1R3 559 aa9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 WDR59Q6PJI9 974 aa9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 OLFML1Q6UWY5 402 aa9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 DBX2Q6ZNG2 339 aa9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 SLC26A9Q7LBE3 791 aa9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 VPS36Q86VN1 386 aa9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 XYLT1Q86Y38 959 aa9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 TC2NQ8N9U0 490 aa9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 CLEC4CQ8WTT0 213 aa9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 SORCS1Q8WY21 1168 aa9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 NDRG1Q92597 394 aaKnown RBP9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 VCPIP1Q96JH7 1222 aa9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 SYNCQ9H7C4 482 aa9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 POPDC2Q9HBU9 364 aa9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 TM9SF3Q9HD45 589 aa9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 SEPT11Q9NVA2 429 aaKnown RBP9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 ZNHIT6Q9NWK9 470 aaKnown RBP9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 ARHGAP20Q9P2F6 1191 aa9.01□□□□□ -0.97
CLSTN3-212ENST00000541770 IMPACTQ9P2X3 320 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms