RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 MFAP3LO75121 409 aa9.49□□□□□ -0.89
SNHG1-215ENST00000540904 RHOCP08134 193 aa9.49□□□□□ -0.89
SNHG1-215ENST00000540904 OR1E1P30953 314 aa9.49□□□□□ -0.89
SNHG1-215ENST00000540904 P2RY2P41231 377 aa9.49□□□□□ -0.89
SNHG1-215ENST00000540904 STK19P49842 368 aaPredicted RBP9.49□□□□□ -0.89
SNHG1-215ENST00000540904 GFPT1Q06210 699 aaPredicted RBP9.49□□□□□ -0.89
SNHG1-215ENST00000540904 EFHC2Q5JST6 749 aa9.49□□□□□ -0.89
SNHG1-215ENST00000540904 ARTNQ5T4W7 220 aa9.49□□□□□ -0.89
SNHG1-215ENST00000540904 FAM72AQ5TYM5 149 aa9.49□□□□□ -0.89
SNHG1-215ENST00000540904 LAIR1Q6GTX8 287 aa9.49□□□□□ -0.89
SNHG1-215ENST00000540904 FAM72DQ6L9T8 149 aa9.49□□□□□ -0.89
SNHG1-215ENST00000540904 FAM72BQ86X60 149 aa9.49□□□□□ -0.89
SNHG1-215ENST00000540904 CACUL1Q86Y37 369 aa9.49□□□□□ -0.89
SNHG1-215ENST00000540904 CNGA4Q8IV77 575 aa9.49□□□□□ -0.89
SNHG1-215ENST00000540904 DRC7Q8IY82 874 aa9.49□□□□□ -0.89
SNHG1-215ENST00000540904 FAM160A2Q8N612 972 aaPredicted RBP9.49□□□□□ -0.89
SNHG1-215ENST00000540904 FRMD1Q8N878 549 aa9.49□□□□□ -0.89
SNHG1-215ENST00000540904 RUBCNQ92622 972 aa9.49□□□□□ -0.89
SNHG1-215ENST00000540904 NTAN1Q96AB6 310 aa9.49□□□□□ -0.89
SNHG1-215ENST00000540904 SPACA7Q96KW9 195 aa9.49□□□□□ -0.89
SNHG1-215ENST00000540904 RPL10LQ96L21 214 aaKnown RBP9.49□□□□□ -0.89
SNHG1-215ENST00000540904 PPP1R9BQ96SB3 815 aa9.49□□□□□ -0.89
SNHG1-215ENST00000540904 FEM1AQ9BSK4 669 aa9.49□□□□□ -0.89
SNHG1-215ENST00000540904 ZYG11BQ9C0D3 744 aa9.49□□□□□ -0.89
SNHG1-215ENST00000540904 MKRN2Q9H000 416 aaKnown RBP9.49□□□□□ -0.89
SNHG1-215ENST00000540904 MUC3BQ9H195 1237 aa9.49□□□□□ -0.89
SNHG1-215ENST00000540904 OSBPL2Q9H1P3 480 aa9.49□□□□□ -0.89
SNHG1-215ENST00000540904 MTG2Q9H4K7 406 aa9.49□□□□□ -0.89
SNHG1-215ENST00000540904 PRDM16Q9HAZ2 1276 aa9.49□□□□□ -0.89
SNHG1-215ENST00000540904 MRPL47Q9HD33 250 aaKnown RBP9.49□□□□□ -0.89
SNHG1-215ENST00000540904 VPS28Q9UK41 221 aa9.49□□□□□ -0.89
SNHG1-215ENST00000540904 GMEB2Q9UKD1 530 aa9.49□□□□□ -0.89
SNHG1-215ENST00000540904 ERVW-1Q9UQF0 538 aa9.49□□□□□ -0.89
SNHG1-215ENST00000540904 TBC1D30Q9Y2I9 924 aa9.49□□□□□ -0.89
SNHG1-215ENST00000540904 A0A0D9SEW6 157 aa9.48□□□□□ -0.89
SNHG1-215ENST00000540904 TTC34A8MYJ7 566 aa9.48□□□□□ -0.89
SNHG1-215ENST00000540904 AKR1B10O60218 316 aa9.48□□□□□ -0.89
SNHG1-215ENST00000540904 RNF8O76064 485 aa9.48□□□□□ -0.89
SNHG1-215ENST00000540904 LRIG2O94898 1065 aa9.48□□□□□ -0.89
SNHG1-215ENST00000540904 SRPRAP08240 638 aaKnown RBP9.48□□□□□ -0.89
SNHG1-215ENST00000540904 BCKDHBP21953 392 aa9.48□□□□□ -0.89
SNHG1-215ENST00000540904 NNMTP40261 264 aa9.48□□□□□ -0.89
SNHG1-215ENST00000540904 ZNF75DP51815 510 aa9.48□□□□□ -0.89
SNHG1-215ENST00000540904 PLK1P53350 603 aa9.48□□□□□ -0.89
SNHG1-215ENST00000540904 GALCP54803 685 aa9.48□□□□□ -0.89
SNHG1-215ENST00000540904 NRG1Q02297 640 aaPredicted RBP9.48□□□□□ -0.89
SNHG1-215ENST00000540904 SULT2A1Q06520 285 aa9.48□□□□□ -0.89
SNHG1-215ENST00000540904 ZNF252P-AS1Q0IIN9 211 aa9.48□□□□□ -0.89
SNHG1-215ENST00000540904 SCAPQ12770 1279 aa9.48□□□□□ -0.89
SNHG1-215ENST00000540904 TBX2Q13207 712 aaPredicted RBP9.48□□□□□ -0.89
SNHG1-215ENST00000540904 CAMK2GQ13555 558 aaPredicted RBP9.48□□□□□ -0.89
SNHG1-215ENST00000540904 BYSLQ13895 437 aaKnown RBP9.48□□□□□ -0.89
SNHG1-215ENST00000540904 ARID5BQ14865 1188 aa9.48□□□□□ -0.89
SNHG1-215ENST00000540904 ELF2Q15723 593 aa9.48□□□□□ -0.89
SNHG1-215ENST00000540904 SLC18A3Q16572 532 aa9.48□□□□□ -0.89
SNHG1-215ENST00000540904 MAP7D1Q3KQU3 841 aa9.48□□□□□ -0.89
SNHG1-215ENST00000540904 PLK5Q496M5 336 aa9.48□□□□□ -0.89
SNHG1-215ENST00000540904 C6orf118Q5T5N4 469 aa9.48□□□□□ -0.89
SNHG1-215ENST00000540904 SETD3Q86TU7 594 aaPredicted RBP9.48□□□□□ -0.89
SNHG1-215ENST00000540904 TMPRSS6Q8IU80 811 aa9.48□□□□□ -0.89
SNHG1-215ENST00000540904 PYROXD2Q8N2H3 581 aa9.48□□□□□ -0.89
SNHG1-215ENST00000540904 DCLK2Q8N568 766 aa9.48□□□□□ -0.89
SNHG1-215ENST00000540904 FNIP1Q8TF40 1166 aa9.48□□□□□ -0.89
SNHG1-215ENST00000540904 PRCCQ92733 491 aaPredicted RBP9.48□□□□□ -0.89
SNHG1-215ENST00000540904 TBC1D31Q96DN5 1066 aa9.48□□□□□ -0.89
SNHG1-215ENST00000540904 ALG14Q96F25 216 aa9.48□□□□□ -0.89
SNHG1-215ENST00000540904 SIPA1Q96FS4 1042 aa9.48□□□□□ -0.89
SNHG1-215ENST00000540904 MYO19Q96H55 970 aa9.48□□□□□ -0.89
SNHG1-215ENST00000540904 MRGPRX3Q96LB0 322 aa9.48□□□□□ -0.89
SNHG1-215ENST00000540904 CCDC42Q96M95 316 aa9.48□□□□□ -0.89
SNHG1-215ENST00000540904 CHP1Q99653 195 aa9.48□□□□□ -0.89
SNHG1-215ENST00000540904 NUP85Q9BW27 656 aa9.48□□□□□ -0.89
SNHG1-215ENST00000540904 PPARGC1AQ9UBK2 798 aaKnown RBP9.48□□□□□ -0.89
SNHG1-215ENST00000540904 SUN2Q9UH99 717 aa9.48□□□□□ -0.89
SNHG1-215ENST00000540904 PCSK1NQ9UHG2 260 aa9.48□□□□□ -0.89
SNHG1-215ENST00000540904 SLCO3A1Q9UIG8 710 aa9.48□□□□□ -0.89
SNHG1-215ENST00000540904 FZD10Q9ULW2 581 aa9.48□□□□□ -0.89
SNHG1-215ENST00000540904 CYP8B1Q9UNU6 501 aa9.48□□□□□ -0.89
SNHG1-215ENST00000540904 OR51B4Q9Y5P0 310 aa9.48□□□□□ -0.89
SNHG1-215ENST00000540904 SSU72P8A0A1W2PR75 194 aa9.47□□□□□ -0.89
SNHG1-215ENST00000540904 CREB3O43889 395 aa9.47□□□□□ -0.89
SNHG1-215ENST00000540904 SNAP91O60641 907 aa9.47□□□□□ -0.89
SNHG1-215ENST00000540904 ZNF217O75362 1048 aa9.47□□□□□ -0.89
SNHG1-215ENST00000540904 RHOBTB1O94844 696 aa9.47□□□□□ -0.89
SNHG1-215ENST00000540904 CYP1A2P05177 515 aa9.47□□□□□ -0.89
SNHG1-215ENST00000540904 RETP07949 1114 aa9.47□□□□□ -0.89
SNHG1-215ENST00000540904 ACADMP11310 421 aa9.47□□□□□ -0.89
SNHG1-215ENST00000540904 RHOQP17081 205 aa9.47□□□□□ -0.89
SNHG1-215ENST00000540904 EPHB2P29323 1055 aa9.47□□□□□ -0.89
SNHG1-215ENST00000540904 MIPP30301 263 aa9.47□□□□□ -0.89
SNHG1-215ENST00000540904 L1CAMP32004 1257 aa9.47□□□□□ -0.89
SNHG1-215ENST00000540904 COPAP53621 1224 aa9.47□□□□□ -0.89
SNHG1-215ENST00000540904 AIF1P55008 147 aa9.47□□□□□ -0.89
SNHG1-215ENST00000540904 ASTE1Q2TB18 679 aaPredicted RBP9.47□□□□□ -0.89
SNHG1-215ENST00000540904 HNRNPA1L2Q32P51 320 aaKnown RBP9.47□□□□□ -0.89
SNHG1-215ENST00000540904 ACCSLQ4AC99 568 aa9.47□□□□□ -0.89
SNHG1-215ENST00000540904 MANEALQ5VSG8 457 aa9.47□□□□□ -0.89
SNHG1-215ENST00000540904 DAB2IPQ5VWQ8 1189 aa9.47□□□□□ -0.89
SNHG1-215ENST00000540904 C11orf74Q86VG3 221 aa9.47□□□□□ -0.89
SNHG1-215ENST00000540904 ARFGAP1Q8N6T3 406 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms