RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 DBN1Q16643 649 aa14.1□□□□□ -0.15
RTN3-210ENST00000540798 CASC4Q6P4E1 433 aa14.1□□□□□ -0.15
RTN3-210ENST00000540798 THOC1Q96FV9 657 aaKnown RBP14.1□□□□□ -0.15
RTN3-210ENST00000540798 LRRC40Q9H9A6 602 aa14.1□□□□□ -0.15
RTN3-210ENST00000540798 KCNK13Q9HB14 408 aa14.1□□□□□ -0.15
RTN3-210ENST00000540798 TBC1D13Q9NVG8 400 aa14.1□□□□□ -0.15
RTN3-210ENST00000540798 PIH1D1Q9NWS0 290 aaKnown RBP14.1□□□□□ -0.15
RTN3-210ENST00000540798 GREB1Q4ZG55 1949 aa14.1□□□□□ -0.15
RTN3-210ENST00000540798 A0A1W2PQ45 241 aaPredicted RBP14.09□□□□□ -0.15
RTN3-210ENST00000540798 A0A1W2PQY0 241 aa14.09□□□□□ -0.15
RTN3-210ENST00000540798 BIRC5O15392 142 aa14.09□□□□□ -0.15
RTN3-210ENST00000540798 FGF10O15520 208 aaPredicted RBP14.09□□□□□ -0.15
RTN3-210ENST00000540798 ALDOAP04075 364 aaKnown RBP14.09□□□□□ -0.15
RTN3-210ENST00000540798 TROVE2P10155 538 aaKnown RBP eCLIP14.09□□□□□ -0.15
RTN3-210ENST00000540798 NQO1P15559 274 aaKnown RBP14.09□□□□□ -0.15
RTN3-210ENST00000540798 NFKB1P19838 968 aa14.09□□□□□ -0.15
RTN3-210ENST00000540798 CCNCP24863 283 aa14.09□□□□□ -0.15
RTN3-210ENST00000540798 ALDH3A1P30838 453 aa14.09□□□□□ -0.15
RTN3-210ENST00000540798 GRIK1P39086 918 aa14.09□□□□□ -0.15
RTN3-210ENST00000540798 COG7P83436 770 aa14.09□□□□□ -0.15
RTN3-210ENST00000540798 OLIG2Q13516 323 aa14.09□□□□□ -0.15
RTN3-210ENST00000540798 BTBD8Q5XKL5 378 aa14.09□□□□□ -0.15
RTN3-210ENST00000540798 MSANTD2Q6P1R3 559 aa14.09□□□□□ -0.15
RTN3-210ENST00000540798 RFWD2Q8NHY2 731 aa14.09□□□□□ -0.15
RTN3-210ENST00000540798 CERS2Q96G23 380 aa14.09□□□□□ -0.15
RTN3-210ENST00000540798 C8orf48Q96LL4 319 aa14.09□□□□□ -0.15
RTN3-210ENST00000540798 LRRC37BQ96QE4 947 aa14.09□□□□□ -0.15
RTN3-210ENST00000540798 IQCGQ9H095 443 aaKnown RBP14.09□□□□□ -0.15
RTN3-210ENST00000540798 NMUR1Q9HB89 426 aa14.09□□□□□ -0.15
RTN3-210ENST00000540798 ALG13Q9NP73 1137 aaKnown RBP14.09□□□□□ -0.15
RTN3-210ENST00000540798 NPHS2Q9NP85 383 aa14.09□□□□□ -0.15
RTN3-210ENST00000540798 IL37Q9NZH6 218 aa14.09□□□□□ -0.15
RTN3-210ENST00000540798 SLC17A6Q9P2U8 582 aa14.09□□□□□ -0.15
RTN3-210ENST00000540798 SCML2Q9UQR0 700 aa14.09□□□□□ -0.15
RTN3-210ENST00000540798 ZCWPW2A0A1B0GU75 182 aa14.09□□□□□ -0.15
RTN3-210ENST00000540798 PAGE1O75459 146 aa14.09□□□□□ -0.15
RTN3-210ENST00000540798 USP1O94782 785 aa14.09□□□□□ -0.15
RTN3-210ENST00000540798 GSRP00390 522 aa14.09□□□□□ -0.15
RTN3-210ENST00000540798 CCR1P32246 355 aa14.09□□□□□ -0.15
RTN3-210ENST00000540798 MAGEA12P43365 314 aa14.09□□□□□ -0.15
RTN3-210ENST00000540798 SLC39A12Q504Y0 691 aa14.09□□□□□ -0.15
RTN3-210ENST00000540798 TRIM42Q8IWZ5 723 aa14.09□□□□□ -0.15
RTN3-210ENST00000540798 URGCPQ8TCY9 931 aa14.09□□□□□ -0.15
RTN3-210ENST00000540798 C7orf26Q96N11 449 aa14.09□□□□□ -0.15
RTN3-210ENST00000540798 VANGL2Q9ULK5 521 aa14.09□□□□□ -0.15
RTN3-210ENST00000540798 PSAT1Q9Y617 370 aa14.09□□□□□ -0.15
RTN3-210ENST00000540798 ATP5HO75947 161 aa14.08□□□□□ -0.15
RTN3-210ENST00000540798 OR4Q2P0C623 313 aa14.08□□□□□ -0.15
RTN3-210ENST00000540798 HOXD10P28358 340 aa14.08□□□□□ -0.15
RTN3-210ENST00000540798 NPY2RP49146 381 aa14.08□□□□□ -0.15
RTN3-210ENST00000540798 MRPL58Q14197 206 aaKnown RBP14.08□□□□□ -0.15
RTN3-210ENST00000540798 SETDB1Q15047 1291 aa14.08□□□□□ -0.15
RTN3-210ENST00000540798 SWT1Q5T5J6 900 aaKnown RBP14.08□□□□□ -0.15
RTN3-210ENST00000540798 CES4AQ5XG92 561 aa14.08□□□□□ -0.15
RTN3-210ENST00000540798 NLRP9Q7RTR0 991 aa14.08□□□□□ -0.15
RTN3-210ENST00000540798 PARP9Q8IXQ6 854 aa14.08□□□□□ -0.15
RTN3-210ENST00000540798 DCP1BQ8IZD4 617 aaKnown RBP14.08□□□□□ -0.15
RTN3-210ENST00000540798 NDUFAF2Q8N183 169 aa14.08□□□□□ -0.15
RTN3-210ENST00000540798 CNTD1Q8N815 330 aa14.08□□□□□ -0.15
RTN3-210ENST00000540798 RNF34Q969K3 372 aa14.08□□□□□ -0.15
RTN3-210ENST00000540798 ERP27Q96DN0 273 aa14.08□□□□□ -0.15
RTN3-210ENST00000540798 MCMBPQ9BTE3 642 aa14.08□□□□□ -0.15
RTN3-210ENST00000540798 FTHL17Q9BXU8 183 aa14.08□□□□□ -0.15
RTN3-210ENST00000540798 PCMTD2Q9NV79 361 aa14.08□□□□□ -0.15
RTN3-210ENST00000540798 OSER1Q9NX31 292 aa14.08□□□□□ -0.15
RTN3-210ENST00000540798 DOCK4Q8N1I0 1966 aa14.08□□□□□ -0.15
RTN3-210ENST00000540798 FAM237BA0A1B0GVD1 139 aa14.08□□□□□ -0.16
RTN3-210ENST00000540798 WASH4PA8MWX3 477 aa14.08□□□□□ -0.16
RTN3-210ENST00000540798 SYN3O14994 580 aa14.08□□□□□ -0.16
RTN3-210ENST00000540798 DLDP09622 509 aaKnown RBP14.08□□□□□ -0.16
RTN3-210ENST00000540798 KYAT3Q6YP21 454 aaKnown RBP14.08□□□□□ -0.16
RTN3-210ENST00000540798 LZTR1Q8N653 840 aa14.08□□□□□ -0.16
RTN3-210ENST00000540798 STKLD1Q8NE28 680 aa14.08□□□□□ -0.16
RTN3-210ENST00000540798 AGAP3Q96P47 875 aa14.08□□□□□ -0.16
RTN3-210ENST00000540798 IL12RB2Q99665 862 aa14.08□□□□□ -0.16
RTN3-210ENST00000540798 TRIM55Q9BYV6 548 aa14.08□□□□□ -0.16
RTN3-210ENST00000540798 NUMBLQ9Y6R0 609 aa14.08□□□□□ -0.16
RTN3-210ENST00000540798 MYLKQ15746 1914 aa14.08□□□□□ -0.16
RTN3-210ENST00000540798 FAM92AA1XBS5 289 aa14.08□□□□□ -0.16
RTN3-210ENST00000540798 MAGEB16A2A368 324 aa14.08□□□□□ -0.16
RTN3-210ENST00000540798 T-ENOLP0DO92 83 aa14.08□□□□□ -0.16
RTN3-210ENST00000540798 MAGEA11P43364 429 aa14.08□□□□□ -0.16
RTN3-210ENST00000540798 KCNJ2P63252 427 aa14.08□□□□□ -0.16
RTN3-210ENST00000540798 RIPK1Q13546 671 aa14.08□□□□□ -0.16
RTN3-210ENST00000540798 CTC1Q2NKJ3 1217 aa14.08□□□□□ -0.16
RTN3-210ENST00000540798 ARMC2Q8NEN0 867 aa14.08□□□□□ -0.16
RTN3-210ENST00000540798 CD99L2Q8TCZ2 262 aa14.08□□□□□ -0.16
RTN3-210ENST00000540798 TBC1D31Q96DN5 1066 aa14.08□□□□□ -0.16
RTN3-210ENST00000540798 SLC39A13Q96H72 371 aa14.08□□□□□ -0.16
RTN3-210ENST00000540798 CELF6Q96J87 481 aaKnown RBP14.08□□□□□ -0.16
RTN3-210ENST00000540798 CPNE1Q99829 537 aa14.08□□□□□ -0.16
RTN3-210ENST00000540798 SLC13A1Q9BZW2 595 aa14.08□□□□□ -0.16
RTN3-210ENST00000540798 ELAC1Q9H777 363 aaKnown RBP14.08□□□□□ -0.16
RTN3-210ENST00000540798 TXLNGQ9NUQ3 528 aa14.08□□□□□ -0.16
RTN3-210ENST00000540798 TMEM161AQ9NX61 479 aa14.08□□□□□ -0.16
RTN3-210ENST00000540798 DNAJB4Q9UDY4 337 aa14.08□□□□□ -0.16
RTN3-210ENST00000540798 SFMBT1Q9UHJ3 866 aa14.08□□□□□ -0.16
RTN3-210ENST00000540798 EMCNQ9ULC0 261 aa14.08□□□□□ -0.16
RTN3-210ENST00000540798 RPS6KL1Q9Y6S9 549 aa14.08□□□□□ -0.16
RTN3-210ENST00000540798 TTC3P53804 2025 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms