RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 MUC3BQ9H195 1237 aa15.93■□□□□ 0.14
DDB1-218ENST00000540784 TMEM248Q9NWD8 314 aa15.93■□□□□ 0.14
DDB1-218ENST00000540784 SPATA6Q9NWH7 488 aaPredicted RBP15.93■□□□□ 0.14
DDB1-218ENST00000540784 CWC15Q9P013 229 aaKnown RBP15.93■□□□□ 0.14
DDB1-218ENST00000540784 TRIM10Q9UDY6 481 aa15.93■□□□□ 0.14
DDB1-218ENST00000540784 PLA2G4CQ9UP65 541 aa15.93■□□□□ 0.14
DDB1-218ENST00000540784 HYOU1Q9Y4L1 999 aa15.93■□□□□ 0.14
DDB1-218ENST00000540784 A0A0U1RQJ8 604 aa15.92■□□□□ 0.14
DDB1-218ENST00000540784 ILVBLA1L0T0 632 aa15.92■□□□□ 0.14
DDB1-218ENST00000540784 MACROD2A1Z1Q3 448 aa15.92■□□□□ 0.14
DDB1-218ENST00000540784 ANTXRLA6NF34 631 aa15.92■□□□□ 0.14
DDB1-218ENST00000540784 CHURC1-FNTBB4DL54 471 aa15.92■□□□□ 0.14
DDB1-218ENST00000540784 FGF10O15520 208 aaPredicted RBP15.92■□□□□ 0.14
DDB1-218ENST00000540784 KRT86O43790 486 aa15.92■□□□□ 0.14
DDB1-218ENST00000540784 GOT1P17174 413 aa15.92■□□□□ 0.14
DDB1-218ENST00000540784 MZF1P28698 734 aaPredicted RBP15.92■□□□□ 0.14
DDB1-218ENST00000540784 HOXC13P31276 330 aa15.92■□□□□ 0.14
DDB1-218ENST00000540784 MAPKAPK2P49137 400 aa15.92■□□□□ 0.14
DDB1-218ENST00000540784 CDH6P55285 790 aa15.92■□□□□ 0.14
DDB1-218ENST00000540784 MTAPQ13126 283 aa15.92■□□□□ 0.14
DDB1-218ENST00000540784 GAS6Q14393 721 aa15.92■□□□□ 0.14
DDB1-218ENST00000540784 PDK2Q15119 407 aa15.92■□□□□ 0.14
DDB1-218ENST00000540784 HSF5Q4G112 596 aaPredicted RBP15.92■□□□□ 0.14
DDB1-218ENST00000540784 ODF2Q5BJF6 829 aa15.92■□□□□ 0.14
DDB1-218ENST00000540784 PITRM1Q5JRX3 1037 aa15.92■□□□□ 0.14
DDB1-218ENST00000540784 LRRC38Q5VT99 294 aa15.92■□□□□ 0.14
DDB1-218ENST00000540784 C11orf63Q6NUN7 778 aa15.92■□□□□ 0.14
DDB1-218ENST00000540784 ZNF783Q6ZMS7 281 aa15.92■□□□□ 0.14
DDB1-218ENST00000540784 RFX8Q6ZV50 586 aa15.92■□□□□ 0.14
DDB1-218ENST00000540784 TRMT11Q7Z4G4 463 aaKnown RBP15.92■□□□□ 0.14
DDB1-218ENST00000540784 POLNQ7Z5Q5 900 aa15.92■□□□□ 0.14
DDB1-218ENST00000540784 NLRP14Q86W24 1093 aa15.92■□□□□ 0.14
DDB1-218ENST00000540784 RHOT1Q8IXI2 618 aa15.92■□□□□ 0.14
DDB1-218ENST00000540784 APCDD1Q8J025 514 aa15.92■□□□□ 0.14
DDB1-218ENST00000540784 SPEM1Q8N4L4 309 aa15.92■□□□□ 0.14
DDB1-218ENST00000540784 CCDC33Q8N5R6 958 aa15.92■□□□□ 0.14
DDB1-218ENST00000540784 ZNF513Q8N8E2 541 aaPredicted RBP15.92■□□□□ 0.14
DDB1-218ENST00000540784 RTL3Q8N8U3 475 aaKnown RBP15.92■□□□□ 0.14
DDB1-218ENST00000540784 ATRIPQ8WXE1 791 aa15.92■□□□□ 0.14
DDB1-218ENST00000540784 SPON2Q9BUD6 331 aa15.92■□□□□ 0.14
DDB1-218ENST00000540784 PCDH18Q9HCL0 1135 aa15.92■□□□□ 0.14
DDB1-218ENST00000540784 DNAI1Q9UI46 699 aa15.92■□□□□ 0.14
DDB1-218ENST00000540784 INTS6Q9UL03 887 aaKnown RBP15.92■□□□□ 0.14
DDB1-218ENST00000540784 WASH4PA8MWX3 477 aa15.91■□□□□ 0.14
DDB1-218ENST00000540784 NPC1O15118 1278 aa15.91■□□□□ 0.14
DDB1-218ENST00000540784 KLF8O95600 359 aaPredicted RBP15.91■□□□□ 0.14
DDB1-218ENST00000540784 DLDP09622 509 aaKnown RBP15.91■□□□□ 0.14
DDB1-218ENST00000540784 HNRNPLP14866 589 aaKnown RBP eCLIP15.91■□□□□ 0.146e-6■■■□□ 18.9
DDB1-218ENST00000540784 PLEKHG6Q3KR16 790 aa15.91■□□□□ 0.14
DDB1-218ENST00000540784 FUT11Q495W5 492 aa15.91■□□□□ 0.14
DDB1-218ENST00000540784 EGFLAMQ63HQ2 1017 aa15.91■□□□□ 0.14
DDB1-218ENST00000540784 MAMSTRQ6ZN01 415 aa15.91■□□□□ 0.14
DDB1-218ENST00000540784 ZNF662Q6ZS27 426 aa15.91■□□□□ 0.14
DDB1-218ENST00000540784 CHPFQ8IZ52 775 aa15.91■□□□□ 0.14
DDB1-218ENST00000540784 ALLCQ8N6M5 410 aa15.91■□□□□ 0.14
DDB1-218ENST00000540784 OR52K2Q8NGK3 314 aa15.91■□□□□ 0.14
DDB1-218ENST00000540784 SORCS1Q8WY21 1168 aa15.91■□□□□ 0.14
DDB1-218ENST00000540784 ALG14Q96F25 216 aa15.91■□□□□ 0.14
DDB1-218ENST00000540784 GOLPH3Q9H4A6 298 aa15.91■□□□□ 0.14
DDB1-218ENST00000540784 THAP10Q9P2Z0 257 aaPredicted RBP15.91■□□□□ 0.14
DDB1-218ENST00000540784 ZNF212Q9UDV6 495 aa15.91■□□□□ 0.14
DDB1-218ENST00000540784 VPS28Q9UK41 221 aa15.91■□□□□ 0.14
DDB1-218ENST00000540784 GUCA1BQ9UMX6 200 aa15.91■□□□□ 0.14
DDB1-218ENST00000540784 OR51B4Q9Y5P0 310 aa15.91■□□□□ 0.14
DDB1-218ENST00000540784 ASLP04424 464 aa15.9■□□□□ 0.14
DDB1-218ENST00000540784 ERCC2P18074 760 aa15.9■□□□□ 0.14
DDB1-218ENST00000540784 AMPD1P23109 780 aa15.9■□□□□ 0.14
DDB1-218ENST00000540784 NTSR1P30989 418 aa15.9■□□□□ 0.14
DDB1-218ENST00000540784 CXCL12P48061 93 aa15.9■□□□□ 0.14
DDB1-218ENST00000540784 ARSEP51690 589 aa15.9■□□□□ 0.14
DDB1-218ENST00000540784 NUBP1P53384 320 aa15.9■□□□□ 0.14
DDB1-218ENST00000540784 ECT2LQ008S8 904 aa15.9■□□□□ 0.14
DDB1-218ENST00000540784 GNA12Q03113 381 aa15.9■□□□□ 0.14
DDB1-218ENST00000540784 SULT2A1Q06520 285 aa15.9■□□□□ 0.14
DDB1-218ENST00000540784 EOGTQ5NDL2 527 aa15.9■□□□□ 0.14
DDB1-218ENST00000540784 SYCE1Q8N0S2 351 aa15.9■□□□□ 0.14
DDB1-218ENST00000540784 IL17RCQ8NAC3 791 aa15.9■□□□□ 0.14
DDB1-218ENST00000540784 TXNDC5Q8NBS9 432 aaKnown RBP15.9■□□□□ 0.14
DDB1-218ENST00000540784 FAM71BQ8TC56 605 aa15.9■□□□□ 0.14
DDB1-218ENST00000540784 CYB5D2Q8WUJ1 264 aa15.9■□□□□ 0.14
DDB1-218ENST00000540784 ACDQ96AP0 544 aa15.9■□□□□ 0.14
DDB1-218ENST00000540784 CSPG4P5Q96PW8 444 aa15.9■□□□□ 0.14
DDB1-218ENST00000540784 CALN1Q9BXU9 219 aa15.9■□□□□ 0.14
DDB1-218ENST00000540784 MAGEH1Q9H213 219 aa15.9■□□□□ 0.14
DDB1-218ENST00000540784 ZDHHC4Q9NPG8 344 aa15.9■□□□□ 0.14
DDB1-218ENST00000540784 NDFIP2Q9NV92 336 aa15.9■□□□□ 0.14
DDB1-218ENST00000540784 DDX56Q9NY93 547 aaKnown RBP15.9■□□□□ 0.14
DDB1-218ENST00000540784 RCOR3Q9P2K3 495 aaPredicted RBP15.9■□□□□ 0.14
DDB1-218ENST00000540784 HCN2Q9UL51 889 aa15.9■□□□□ 0.14
DDB1-218ENST00000540784 NEU3Q9UQ49 428 aa15.9■□□□□ 0.14
DDB1-218ENST00000540784 PPP2R2CQ9Y2T4 447 aa15.9■□□□□ 0.14
DDB1-218ENST00000540784 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.9■□□□□ 0.14
DDB1-218ENST00000540784 A0A0D9SEW6 157 aa15.89■□□□□ 0.13
DDB1-218ENST00000540784 GRID2IPA4D2P6 1211 aa15.89■□□□□ 0.13
DDB1-218ENST00000540784 LAMTOR5O43504 91 aa15.89■□□□□ 0.13
DDB1-218ENST00000540784 RAMP2O60895 175 aa15.89■□□□□ 0.13
DDB1-218ENST00000540784 PALMO75781 387 aa15.89■□□□□ 0.13
DDB1-218ENST00000540784 CD48P09326 243 aa15.89■□□□□ 0.13
DDB1-218ENST00000540784 KDELR1P24390 212 aa15.89■□□□□ 0.13
DDB1-218ENST00000540784 IL4RP24394 825 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms