RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 SLURP2P0DP57 97 aa13.27□□□□□ -0.29
DNMT1-203ENST00000540357 EPHA3P29320 983 aa13.27□□□□□ -0.29
DNMT1-203ENST00000540357 LRPAP1P30533 357 aa13.27□□□□□ -0.29
DNMT1-203ENST00000540357 NOVP48745 357 aa13.27□□□□□ -0.29
DNMT1-203ENST00000540357 NAGLUP54802 743 aa13.27□□□□□ -0.29
DNMT1-203ENST00000540357 CRADDP78560 199 aa13.27□□□□□ -0.29
DNMT1-203ENST00000540357 STXBP5Q5T5C0 1151 aa13.27□□□□□ -0.29
DNMT1-203ENST00000540357 AMIGO2Q86SJ2 522 aa13.27□□□□□ -0.29
DNMT1-203ENST00000540357 FAM83AQ86UY5 434 aa13.27□□□□□ -0.29
DNMT1-203ENST00000540357 GLIS1Q8NBF1 620 aa13.27□□□□□ -0.29
DNMT1-203ENST00000540357 FAM84AQ96KN4 292 aa13.27□□□□□ -0.29
DNMT1-203ENST00000540357 FBXL18Q96ME1 805 aa13.27□□□□□ -0.29
DNMT1-203ENST00000540357 EBF4Q9BQW3 602 aa13.27□□□□□ -0.29
DNMT1-203ENST00000540357 ERAP1Q9NZ08 941 aa13.27□□□□□ -0.29
DNMT1-203ENST00000540357 TJP1Q07157 1748 aa13.26□□□□□ -0.29
DNMT1-203ENST00000540357 SNAP91O60641 907 aa13.26□□□□□ -0.29
DNMT1-203ENST00000540357 LGR5O75473 907 aa13.26□□□□□ -0.29
DNMT1-203ENST00000540357 PLD5Q8N7P1 536 aa13.26□□□□□ -0.29
DNMT1-203ENST00000540357 UBR7Q8N806 425 aa13.26□□□□□ -0.29
DNMT1-203ENST00000540357 VAT1Q99536 393 aa13.26□□□□□ -0.29
DNMT1-203ENST00000540357 RBBP8Q99708 897 aa13.26□□□□□ -0.29
DNMT1-203ENST00000540357 IL22Q9GZX6 179 aa13.26□□□□□ -0.29
DNMT1-203ENST00000540357 PCDH18Q9HCL0 1135 aa13.26□□□□□ -0.29
DNMT1-203ENST00000540357 C8orf4Q9NR00 106 aa13.26□□□□□ -0.29
DNMT1-203ENST00000540357 VPS45Q9NRW7 570 aa13.26□□□□□ -0.29
DNMT1-203ENST00000540357 DDX28Q9NUL7 540 aaKnown RBP13.26□□□□□ -0.29
DNMT1-203ENST00000540357 NDUFAF1Q9Y375 327 aa13.26□□□□□ -0.29
DNMT1-203ENST00000540357 SUPT3HB4E1H0 165 aa13.26□□□□□ -0.29
DNMT1-203ENST00000540357 VWA5AO00534 786 aa13.26□□□□□ -0.29
DNMT1-203ENST00000540357 KLHDC10Q6PID8 442 aa13.26□□□□□ -0.29
DNMT1-203ENST00000540357 NT5DC4Q86YG4 428 aa13.26□□□□□ -0.29
DNMT1-203ENST00000540357 SCUBE3Q8IX30 993 aa13.26□□□□□ -0.29
DNMT1-203ENST00000540357 UTP4Q969X6 686 aaKnown RBP13.26□□□□□ -0.29
DNMT1-203ENST00000540357 FAM162AQ96A26 154 aa13.26□□□□□ -0.29
DNMT1-203ENST00000540357 CEP41Q9BYV8 373 aa13.26□□□□□ -0.29
DNMT1-203ENST00000540357 POMKQ9H5K3 350 aa13.26□□□□□ -0.29
DNMT1-203ENST00000540357 HMG20AQ9NP66 347 aa13.26□□□□□ -0.29
DNMT1-203ENST00000540357 DNAAF2Q9NVR5 837 aaKnown RBP13.26□□□□□ -0.29
DNMT1-203ENST00000540357 PCDHB12Q9Y5F1 795 aa13.26□□□□□ -0.29
DNMT1-203ENST00000540357 CABYRO75952 493 aa13.26□□□□□ -0.29
DNMT1-203ENST00000540357 F9P00740 461 aa13.26□□□□□ -0.29
DNMT1-203ENST00000540357 T-ENOLP0DO92 83 aa13.26□□□□□ -0.29
DNMT1-203ENST00000540357 NFKBIAP25963 317 aa13.26□□□□□ -0.29
DNMT1-203ENST00000540357 PSMB4P28070 264 aa13.26□□□□□ -0.29
DNMT1-203ENST00000540357 PPIL2Q13356 520 aa13.26□□□□□ -0.29
DNMT1-203ENST00000540357 TNS4Q8IZW8 715 aa13.26□□□□□ -0.29
DNMT1-203ENST00000540357 CNTD1Q8N815 330 aa13.26□□□□□ -0.29
DNMT1-203ENST00000540357 AGBL3Q8NEM8 1001 aa13.26□□□□□ -0.29
DNMT1-203ENST00000540357 APOL2Q9BQE5 337 aa13.26□□□□□ -0.29
DNMT1-203ENST00000540357 APOBEC3GQ9HC16 384 aaKnown RBP13.26□□□□□ -0.29
DNMT1-203ENST00000540357 SCHIP1Q9P0W5 487 aaPredicted RBP13.26□□□□□ -0.29
DNMT1-203ENST00000540357 MTF2Q9Y483 593 aaPredicted RBP13.26□□□□□ -0.29
DNMT1-203ENST00000540357 GMEB1Q9Y692 573 aa13.26□□□□□ -0.29
DNMT1-203ENST00000540357 V9GYQ6 96 aa13.26□□□□□ -0.29
DNMT1-203ENST00000540357 CRTAMO95727 393 aa13.25□□□□□ -0.29
DNMT1-203ENST00000540357 IL1BP01584 269 aa13.25□□□□□ -0.29
DNMT1-203ENST00000540357 MTTPP55157 894 aa13.25□□□□□ -0.29
DNMT1-203ENST00000540357 MRPS15P82914 257 aaKnown RBP13.25□□□□□ -0.29
DNMT1-203ENST00000540357 C11orf91Q3C1V1 193 aa13.25□□□□□ -0.29
DNMT1-203ENST00000540357 SPDYE2Q495Y8 402 aa13.25□□□□□ -0.29
DNMT1-203ENST00000540357 PLEKHG4BQ96PX9 1271 aa13.25□□□□□ -0.29
DNMT1-203ENST00000540357 MMP19Q99542 508 aa13.25□□□□□ -0.29
DNMT1-203ENST00000540357 C17orf80Q9BSJ5 609 aa13.25□□□□□ -0.29
DNMT1-203ENST00000540357 ASB14A6NK59 587 aa13.25□□□□□ -0.29
DNMT1-203ENST00000540357 CCNT2O60583 730 aaKnown RBP13.25□□□□□ -0.29
DNMT1-203ENST00000540357 PYGLP06737 847 aa13.25□□□□□ -0.29
DNMT1-203ENST00000540357 SLC26A2P50443 739 aa13.25□□□□□ -0.29
DNMT1-203ENST00000540357 FUT11Q495W5 492 aa13.25□□□□□ -0.29
DNMT1-203ENST00000540357 APOBEC3FQ8IUX4 373 aaKnown RBP13.25□□□□□ -0.29
DNMT1-203ENST00000540357 SHCBP1Q8NEM2 672 aa13.25□□□□□ -0.29
DNMT1-203ENST00000540357 ASB2Q96Q27 587 aa13.25□□□□□ -0.29
DNMT1-203ENST00000540357 EPS8L2Q9H6S3 715 aa13.25□□□□□ -0.29
DNMT1-203ENST00000540357 UBQLN1Q9UMX0 589 aaKnown RBP13.25□□□□□ -0.29
DNMT1-203ENST00000540357 LACTBL1A8MY62 500 aa13.25□□□□□ -0.29
DNMT1-203ENST00000540357 E5RI56 91 aa13.25□□□□□ -0.29
DNMT1-203ENST00000540357 GCATO75600 419 aa13.25□□□□□ -0.29
DNMT1-203ENST00000540357 PABPC4LP0CB38 370 aaKnown RBP13.25□□□□□ -0.29
DNMT1-203ENST00000540357 CAPRIN1Q14444 709 aaKnown RBP13.25□□□□□ -0.29
DNMT1-203ENST00000540357 CYP51A1Q16850 503 aa13.25□□□□□ -0.29
DNMT1-203ENST00000540357 PIWIL4Q7Z3Z4 852 aaKnown RBP13.25□□□□□ -0.29
DNMT1-203ENST00000540357 MIER2Q8N344 545 aa13.25□□□□□ -0.29
DNMT1-203ENST00000540357 PLEKHO2Q8TD55 490 aa13.25□□□□□ -0.29
DNMT1-203ENST00000540357 LENG8Q96PV6 779 aaPredicted RBP13.25□□□□□ -0.29
DNMT1-203ENST00000540357 GPRC5DQ9NZD1 345 aa13.25□□□□□ -0.29
DNMT1-203ENST00000540357 BHMG1C9JSJ3 638 aaPredicted RBP13.25□□□□□ -0.29
DNMT1-203ENST00000540357 CCNE2O96020 404 aa13.25□□□□□ -0.29
DNMT1-203ENST00000540357 CD48P09326 243 aa13.25□□□□□ -0.29
DNMT1-203ENST00000540357 NCAM1P13591 858 aa13.25□□□□□ -0.29
DNMT1-203ENST00000540357 TNFSF9P41273 254 aa13.25□□□□□ -0.29
DNMT1-203ENST00000540357 BNIP2Q12982 314 aa13.25□□□□□ -0.29
DNMT1-203ENST00000540357 SHROOM1Q2M3G4 852 aaPredicted RBP13.25□□□□□ -0.29
DNMT1-203ENST00000540357 BTBD8Q5XKL5 378 aa13.25□□□□□ -0.29
DNMT1-203ENST00000540357 ZDHHC14Q8IZN3 488 aa13.25□□□□□ -0.29
DNMT1-203ENST00000540357 THEM5Q8N1Q8 247 aa13.25□□□□□ -0.29
DNMT1-203ENST00000540357 APBA2Q99767 749 aa13.25□□□□□ -0.29
DNMT1-203ENST00000540357 ACO2Q99798 780 aaKnown RBP13.25□□□□□ -0.29
DNMT1-203ENST00000540357 SYBUQ9NX95 663 aa13.25□□□□□ -0.29
DNMT1-203ENST00000540357 ASB3Q9Y575 518 aa13.25□□□□□ -0.29
DNMT1-203ENST00000540357 VPS4BO75351 444 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 FBXO21O94952 628 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms