RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 IGLV3-25P01717 112 aa15.77■□□□□ 0.12
UBE3B-211ENST00000539843 ZNF18P17022 549 aa15.77■□□□□ 0.12
UBE3B-211ENST00000539843 NUDT1P36639 197 aa15.77■□□□□ 0.12
UBE3B-211ENST00000539843 CCR5P51681 352 aa15.77■□□□□ 0.12
UBE3B-211ENST00000539843 GALCP54803 685 aa15.77■□□□□ 0.12
UBE3B-211ENST00000539843 CCDC15Q0P6D6 951 aa15.77■□□□□ 0.12
UBE3B-211ENST00000539843 NME3Q13232 169 aa15.77■□□□□ 0.12
UBE3B-211ENST00000539843 MAN2A1Q16706 1144 aa15.77■□□□□ 0.12
UBE3B-211ENST00000539843 ACCSLQ4AC99 568 aa15.77■□□□□ 0.12
UBE3B-211ENST00000539843 ACBD5Q5T8D3 534 aaPredicted RBP15.77■□□□□ 0.12
UBE3B-211ENST00000539843 GJB7Q6PEY0 223 aa15.77■□□□□ 0.12
UBE3B-211ENST00000539843 C1orf131Q8NDD1 294 aaKnown RBP15.77■□□□□ 0.12
UBE3B-211ENST00000539843 OR14C36Q8NHC7 312 aa15.77■□□□□ 0.12
UBE3B-211ENST00000539843 RPL10LQ96L21 214 aaKnown RBP15.77■□□□□ 0.12
UBE3B-211ENST00000539843 SLC2A13Q96QE2 648 aa15.77■□□□□ 0.12
UBE3B-211ENST00000539843 NEUROG2Q9H2A3 272 aa15.77■□□□□ 0.12
UBE3B-211ENST00000539843 CCDC86Q9H6F5 360 aaKnown RBP15.77■□□□□ 0.12
UBE3B-211ENST00000539843 GDF3Q9NR23 364 aa15.77■□□□□ 0.12
UBE3B-211ENST00000539843 FTSJ1Q9UET6 329 aa15.77■□□□□ 0.12
UBE3B-211ENST00000539843 CYTH4Q9UIA0 394 aa15.77■□□□□ 0.12
UBE3B-211ENST00000539843 XPO7Q9UIA9 1087 aaKnown RBP15.77■□□□□ 0.12
UBE3B-211ENST00000539843 MUC22E2RYF6 1773 aaPredicted RBP15.77■□□□□ 0.11
UBE3B-211ENST00000539843 GOLGA8CPA6NN73 597 aa15.76■□□□□ 0.11
UBE3B-211ENST00000539843 PES1O00541 588 aaKnown RBP15.76■□□□□ 0.11
UBE3B-211ENST00000539843 SLC7A4O43246 635 aa15.76■□□□□ 0.11
UBE3B-211ENST00000539843 CLDN11O75508 207 aa15.76■□□□□ 0.11
UBE3B-211ENST00000539843 DAB1O75553 588 aa15.76■□□□□ 0.11
UBE3B-211ENST00000539843 CD38P28907 300 aa15.76■□□□□ 0.11
UBE3B-211ENST00000539843 NOS2P35228 1153 aa15.76■□□□□ 0.11
UBE3B-211ENST00000539843 CTSOP43234 321 aaPredicted RBP15.76■□□□□ 0.11
UBE3B-211ENST00000539843 CTSKP43235 329 aa15.76■□□□□ 0.11
UBE3B-211ENST00000539843 ARRB1P49407 418 aaPredicted RBP15.76■□□□□ 0.11
UBE3B-211ENST00000539843 KRT83P78385 493 aa15.76■□□□□ 0.11
UBE3B-211ENST00000539843 BNC1Q01954 994 aa15.76■□□□□ 0.11
UBE3B-211ENST00000539843 DBX2Q6ZNG2 339 aa15.76■□□□□ 0.11
UBE3B-211ENST00000539843 PRPF39Q86UA1 669 aaKnown RBP15.76■□□□□ 0.11
UBE3B-211ENST00000539843 APCDD1Q8J025 514 aa15.76■□□□□ 0.11
UBE3B-211ENST00000539843 STK40Q8N2I9 435 aa15.76■□□□□ 0.11
UBE3B-211ENST00000539843 OXR1Q8N573 874 aa15.76■□□□□ 0.11
UBE3B-211ENST00000539843 MYEOVQ96EZ4 313 aa15.76■□□□□ 0.11
UBE3B-211ENST00000539843 CPXM1Q96SM3 734 aa15.76■□□□□ 0.11
UBE3B-211ENST00000539843 ACP6Q9NPH0 428 aa15.76■□□□□ 0.11
UBE3B-211ENST00000539843 SLCO3A1Q9UIG8 710 aa15.76■□□□□ 0.11
UBE3B-211ENST00000539843 VPS28Q9UK41 221 aa15.76■□□□□ 0.11
UBE3B-211ENST00000539843 DNAJC12Q9UKB3 198 aa15.76■□□□□ 0.11
UBE3B-211ENST00000539843 TBC1D3DA0A087WVF3 549 aa15.75■□□□□ 0.11
UBE3B-211ENST00000539843 TBC1D3IA0A087WXS9 549 aa15.75■□□□□ 0.11
UBE3B-211ENST00000539843 TBC1D3EA0A087X179 549 aa15.75■□□□□ 0.11
UBE3B-211ENST00000539843 TBC1D3KA0A087X1G2 549 aa15.75■□□□□ 0.11
UBE3B-211ENST00000539843 TBC1D3FA6NER0 549 aaPredicted RBP15.75■□□□□ 0.11
UBE3B-211ENST00000539843 BECN2A8MW95 431 aa15.75■□□□□ 0.11
UBE3B-211ENST00000539843 TBC1D3LB9A6J9 549 aa15.75■□□□□ 0.11
UBE3B-211ENST00000539843 H0Y8X5 98 aa15.75■□□□□ 0.11
UBE3B-211ENST00000539843 M0QYT0 321 aa15.75■□□□□ 0.11
UBE3B-211ENST00000539843 GRAP2O75791 330 aa15.75■□□□□ 0.11
UBE3B-211ENST00000539843 F9P00740 461 aa15.75■□□□□ 0.11
UBE3B-211ENST00000539843 IGHV4-34P06331 123 aa15.75■□□□□ 0.11
UBE3B-211ENST00000539843 ITGAVP06756 1048 aa15.75■□□□□ 0.11
UBE3B-211ENST00000539843 TBC1D3HP0C7X1 549 aa15.75■□□□□ 0.11
UBE3B-211ENST00000539843 PON1P27169 355 aa15.75■□□□□ 0.11
UBE3B-211ENST00000539843 MZF1P28698 734 aaPredicted RBP15.75■□□□□ 0.11
UBE3B-211ENST00000539843 PLK1P53350 603 aa15.75■□□□□ 0.11
UBE3B-211ENST00000539843 SLC6A3Q01959 620 aa15.75■□□□□ 0.11
UBE3B-211ENST00000539843 BRMS1LQ5PSV4 323 aa15.75■□□□□ 0.11
UBE3B-211ENST00000539843 TBC1D3GQ6DHY5 549 aa15.75■□□□□ 0.11
UBE3B-211ENST00000539843 TBC1D3CQ6IPX1 549 aa15.75■□□□□ 0.11
UBE3B-211ENST00000539843 FBXL22Q6P050 247 aa15.75■□□□□ 0.11
UBE3B-211ENST00000539843 LRRC31Q6UY01 552 aa15.75■□□□□ 0.11
UBE3B-211ENST00000539843 CCNI2Q6ZMN8 369 aaPredicted RBP15.75■□□□□ 0.11
UBE3B-211ENST00000539843 FAM183BPQ6ZVS7 135 aa15.75■□□□□ 0.11
UBE3B-211ENST00000539843 SLC26A9Q7LBE3 791 aa15.75■□□□□ 0.11
UBE3B-211ENST00000539843 TBC1D3Q8IZP1 549 aaPredicted RBP15.75■□□□□ 0.11
UBE3B-211ENST00000539843 TMEM35BQ8NCS4 154 aa15.75■□□□□ 0.11
UBE3B-211ENST00000539843 BAHD1Q8TBE0 780 aaPredicted RBP15.75■□□□□ 0.11
UBE3B-211ENST00000539843 PTPRN2Q92932 1015 aa15.75■□□□□ 0.11
UBE3B-211ENST00000539843 SERAC1Q96JX3 654 aa15.75■□□□□ 0.11
UBE3B-211ENST00000539843 SLC6A18Q96N87 628 aa15.75■□□□□ 0.11
UBE3B-211ENST00000539843 ELF4Q99607 663 aaPredicted RBP15.75■□□□□ 0.11
UBE3B-211ENST00000539843 MUC3BQ9H195 1237 aa15.75■□□□□ 0.11
UBE3B-211ENST00000539843 KDM4CQ9H3R0 1056 aa15.75■□□□□ 0.11
UBE3B-211ENST00000539843 VANGL2Q9ULK5 521 aa15.75■□□□□ 0.11
UBE3B-211ENST00000539843 LAMA1P25391 3075 aa15.74■□□□□ 0.11
UBE3B-211ENST00000539843 IGF2RP11717 2491 aa15.74■□□□□ 0.11
UBE3B-211ENST00000539843 ALOX15BO15296 676 aa15.74■□□□□ 0.11
UBE3B-211ENST00000539843 TPM2P07951 284 aa15.74■□□□□ 0.11
UBE3B-211ENST00000539843 CDK4P11802 303 aa15.74■□□□□ 0.11
UBE3B-211ENST00000539843 STK19P49842 368 aaPredicted RBP15.74■□□□□ 0.11
UBE3B-211ENST00000539843 VASPP50552 380 aaPredicted RBP15.74■□□□□ 0.11
UBE3B-211ENST00000539843 ADPRHP54922 357 aa15.74■□□□□ 0.11
UBE3B-211ENST00000539843 CDH4P55283 916 aa15.74■□□□□ 0.11
UBE3B-211ENST00000539843 SCAPQ12770 1279 aa15.74■□□□□ 0.11
UBE3B-211ENST00000539843 AUHQ13825 339 aaKnown RBP15.74■□□□□ 0.11
UBE3B-211ENST00000539843 RAPGEF1Q13905 1077 aa15.74■□□□□ 0.11
UBE3B-211ENST00000539843 TAF5Q15542 800 aa15.74■□□□□ 0.11
UBE3B-211ENST00000539843 CCDC157Q569K6 752 aa15.74■□□□□ 0.11
UBE3B-211ENST00000539843 OLFML1Q6UWY5 402 aa15.74■□□□□ 0.11
UBE3B-211ENST00000539843 LAYNQ6UX15 382 aa15.74■□□□□ 0.11
UBE3B-211ENST00000539843 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.74■□□□□ 0.11
UBE3B-211ENST00000539843 CIR1Q86X95 450 aaPredicted RBP15.74■□□□□ 0.11
UBE3B-211ENST00000539843 PROSER1Q86XN7 944 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms