RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 EIF2B3Q9NR50 452 aaKnown RBP12.09□□□□□ -0.47
VTN-202ENST00000539746 KIAA1522Q9P206 1035 aaPredicted RBP12.09□□□□□ -0.47
VTN-202ENST00000539746 KLHL8Q9P2G9 620 aaPredicted RBP12.09□□□□□ -0.47
VTN-202ENST00000539746 CDH7Q9ULB5 785 aa12.09□□□□□ -0.47
VTN-202ENST00000539746 PLXNA4Q9HCM2 1894 aa12.08□□□□□ -0.48
VTN-202ENST00000539746 DFFAO00273 331 aa12.08□□□□□ -0.48
VTN-202ENST00000539746 RRP9O43818 475 aaKnown RBP12.08□□□□□ -0.48
VTN-202ENST00000539746 SPAG6O75602 509 aa12.08□□□□□ -0.48
VTN-202ENST00000539746 RFPL2O75678 378 aa12.08□□□□□ -0.48
VTN-202ENST00000539746 TSHRP16473 764 aa12.08□□□□□ -0.48
VTN-202ENST00000539746 NNMTP40261 264 aa12.08□□□□□ -0.48
VTN-202ENST00000539746 CDR1P51861 262 aa12.08□□□□□ -0.48
VTN-202ENST00000539746 ARL4CP56559 192 aa12.08□□□□□ -0.48
VTN-202ENST00000539746 IFI35P80217 286 aaPredicted RBP12.08□□□□□ -0.48
VTN-202ENST00000539746 CYP4F8P98187 520 aa12.08□□□□□ -0.48
VTN-202ENST00000539746 GPS1Q13098 491 aa12.08□□□□□ -0.48
VTN-202ENST00000539746 USP4Q13107 963 aa12.08□□□□□ -0.48
VTN-202ENST00000539746 ADAM15Q13444 863 aa12.08□□□□□ -0.48
VTN-202ENST00000539746 KCNC3Q14003 757 aa12.08□□□□□ -0.48
VTN-202ENST00000539746 TEAD2Q15562 447 aa12.08□□□□□ -0.48
VTN-202ENST00000539746 SLC14A2Q15849 920 aa12.08□□□□□ -0.48
VTN-202ENST00000539746 TCEAL5Q5H9L2 206 aa12.08□□□□□ -0.48
VTN-202ENST00000539746 MARC1Q5VT66 337 aa12.08□□□□□ -0.48
VTN-202ENST00000539746 TMC5Q6UXY8 1006 aa12.08□□□□□ -0.48
VTN-202ENST00000539746 CCNI2Q6ZMN8 369 aaPredicted RBP12.08□□□□□ -0.48
VTN-202ENST00000539746 Q6ZNB5 142 aa12.08□□□□□ -0.48
VTN-202ENST00000539746 CENPUQ71F23 418 aa12.08□□□□□ -0.48
VTN-202ENST00000539746 HDXQ7Z353 690 aa12.08□□□□□ -0.48
VTN-202ENST00000539746 TMEM150AQ86TG1 271 aa12.08□□□□□ -0.48
VTN-202ENST00000539746 SUGP1Q8IWZ8 645 aaKnown RBP12.08□□□□□ -0.48
VTN-202ENST00000539746 PYROXD2Q8N2H3 581 aa12.08□□□□□ -0.48
VTN-202ENST00000539746 PLCD3Q8N3E9 789 aa12.08□□□□□ -0.48
VTN-202ENST00000539746 MICALL1Q8N3F8 863 aa12.08□□□□□ -0.48
VTN-202ENST00000539746 FAM71DQ8N9W8 422 aa12.08□□□□□ -0.48
VTN-202ENST00000539746 ATG4AQ8WYN0 398 aa12.08□□□□□ -0.48
VTN-202ENST00000539746 ZNF707Q96C28 371 aaPredicted RBP12.08□□□□□ -0.48
VTN-202ENST00000539746 SRPK1Q96SB4 655 aaKnown RBP12.08□□□□□ -0.48
VTN-202ENST00000539746 TMEM121Q9BTD3 319 aa12.08□□□□□ -0.48
VTN-202ENST00000539746 MUC3BQ9H195 1237 aa12.08□□□□□ -0.48
VTN-202ENST00000539746 IGFLR1Q9H665 355 aa12.08□□□□□ -0.48
VTN-202ENST00000539746 ZFP14Q9HCL3 533 aa12.08□□□□□ -0.48
VTN-202ENST00000539746 VPS45Q9NRW7 570 aa12.08□□□□□ -0.48
VTN-202ENST00000539746 SMPD4Q9NXE4 827 aa12.08□□□□□ -0.48
VTN-202ENST00000539746 CALCOCO1Q9P1Z2 691 aa12.08□□□□□ -0.48
VTN-202ENST00000539746 NUDT5Q9UKK9 219 aa12.08□□□□□ -0.48
VTN-202ENST00000539746 TBC1D30Q9Y2I9 924 aa12.08□□□□□ -0.48
VTN-202ENST00000539746 NR2E1Q9Y466 385 aa12.08□□□□□ -0.48
VTN-202ENST00000539746 A0A1W2PQ67 120 aa12.07□□□□□ -0.48
VTN-202ENST00000539746 GOLGA6L10A6NI86 522 aa12.07□□□□□ -0.48
VTN-202ENST00000539746 DNALI1O14645 258 aaPredicted RBP12.07□□□□□ -0.48
VTN-202ENST00000539746 TIMM44O43615 452 aa12.07□□□□□ -0.48
VTN-202ENST00000539746 MFSD11O43934 449 aa12.07□□□□□ -0.48
VTN-202ENST00000539746 PPFIA2O75334 1257 aa12.07□□□□□ -0.48
VTN-202ENST00000539746 SEC31AO94979 1220 aaKnown RBP12.07□□□□□ -0.48
VTN-202ENST00000539746 IRF1P10914 325 aa12.07□□□□□ -0.48
VTN-202ENST00000539746 CCNB1P14635 433 aa12.07□□□□□ -0.48
VTN-202ENST00000539746 PHBP35232 272 aa12.07□□□□□ -0.48
VTN-202ENST00000539746 GEMP55040 296 aa12.07□□□□□ -0.48
VTN-202ENST00000539746 GNA12Q03113 381 aa12.07□□□□□ -0.48
VTN-202ENST00000539746 GBE1Q04446 702 aa12.07□□□□□ -0.48
VTN-202ENST00000539746 GAD2Q05329 585 aa12.07□□□□□ -0.48
VTN-202ENST00000539746 ZNF235Q14590 738 aa12.07□□□□□ -0.48
VTN-202ENST00000539746 GRM3Q14832 879 aa12.07□□□□□ -0.48
VTN-202ENST00000539746 INO80DQ53TQ3 878 aaPredicted RBP12.07□□□□□ -0.48
VTN-202ENST00000539746 RARS2Q5T160 578 aaKnown RBP12.07□□□□□ -0.48
VTN-202ENST00000539746 AFMIDQ63HM1 303 aa12.07□□□□□ -0.48
VTN-202ENST00000539746 IL31Q6EBC2 164 aa12.07□□□□□ -0.48
VTN-202ENST00000539746 NAPEPLDQ6IQ20 393 aa12.07□□□□□ -0.48
VTN-202ENST00000539746 AADACL2Q6P093 401 aa12.07□□□□□ -0.48
VTN-202ENST00000539746 TRMT10CQ7L0Y3 403 aaKnown RBP12.07□□□□□ -0.48
VTN-202ENST00000539746 NLRP14Q86W24 1093 aa12.07□□□□□ -0.48
VTN-202ENST00000539746 CPNE8Q86YQ8 564 aa12.07□□□□□ -0.48
VTN-202ENST00000539746 MFN1Q8IWA4 741 aa12.07□□□□□ -0.48
VTN-202ENST00000539746 HS6ST3Q8IZP7 471 aa12.07□□□□□ -0.48
VTN-202ENST00000539746 CPA6Q8N4T0 437 aa12.07□□□□□ -0.48
VTN-202ENST00000539746 ZSCAN18Q8TBC5 510 aaPredicted RBP12.07□□□□□ -0.48
VTN-202ENST00000539746 BPIFB1Q8TDL5 484 aa12.07□□□□□ -0.48
VTN-202ENST00000539746 WFIKKN2Q8TEU8 576 aa12.07□□□□□ -0.48
VTN-202ENST00000539746 CAVIN3Q969G5 261 aa12.07□□□□□ -0.48
VTN-202ENST00000539746 SLC46A2Q9BY10 475 aa12.07□□□□□ -0.48
VTN-202ENST00000539746 RNF38Q9H0F5 515 aa12.07□□□□□ -0.48
VTN-202ENST00000539746 STMN4Q9H169 189 aaPredicted RBP12.07□□□□□ -0.48
VTN-202ENST00000539746 PRDM12Q9H4Q4 367 aa12.07□□□□□ -0.48
VTN-202ENST00000539746 ANKZF1Q9H8Y5 726 aa12.07□□□□□ -0.48
VTN-202ENST00000539746 VIPAS39Q9H9C1 493 aa12.07□□□□□ -0.48
VTN-202ENST00000539746 SEPT3Q9UH03 358 aa12.07□□□□□ -0.48
VTN-202ENST00000539746 IPO11Q9UI26 975 aaKnown RBP12.07□□□□□ -0.48
VTN-202ENST00000539746 TCRBV7S2A1N4TA0A589 114 aa12.06□□□□□ -0.48
VTN-202ENST00000539746 RASA4BC9J798 803 aa12.06□□□□□ -0.48
VTN-202ENST00000539746 RNF103O00237 685 aa12.06□□□□□ -0.48
VTN-202ENST00000539746 RASA4O43374 803 aa12.06□□□□□ -0.48
VTN-202ENST00000539746 CSPG5O95196 566 aa12.06□□□□□ -0.48
VTN-202ENST00000539746 ASLP04424 464 aa12.06□□□□□ -0.48
VTN-202ENST00000539746 IVLP07476 585 aa12.06□□□□□ -0.48
VTN-202ENST00000539746 MLNP12872 115 aa12.06□□□□□ -0.48
VTN-202ENST00000539746 TPSB2P20231 275 aa12.06□□□□□ -0.48
VTN-202ENST00000539746 PTGIRP43119 386 aa12.06□□□□□ -0.48
VTN-202ENST00000539746 KCNQ1P51787 676 aa12.06□□□□□ -0.48
VTN-202ENST00000539746 CLCN6P51797 869 aa12.06□□□□□ -0.48
VTN-202ENST00000539746 EIF3BP55884 814 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms