RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 A0A0A6YYJ9 748 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 ARHGAP10A1A4S6 786 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 A8MVJ9 347 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 H0YAE9 185 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 ACOT7O00154 380 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 CASQ2O14958 399 aaPredicted RBP4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 KCNQ3O43525 872 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 KLHL41O60662 606 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 KINO60870 393 aaKnown RBP4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 OPN1MWP04001 364 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 TUBB4AP04350 444 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 HEXBP07686 556 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 DLDP09622 509 aaKnown RBP4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 OPN1MW2P0DN77 364 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 OPN1MW3P0DN78 364 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 IL1R1P14778 569 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 EGR1P18146 543 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 BTF3P20290 206 aaKnown RBP4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 EPHA8P29322 1005 aaPredicted RBP4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 CIITAP33076 1130 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 PAFAH1B1P43034 410 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 SLC12A3P55017 1021 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 SLC26A5P58743 744 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 STARD6P59095 220 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 RPS3AP61247 264 aaKnown RBP4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 PPP3CAQ08209 521 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 C17orf67Q0P5P2 114 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 SCAPQ12770 1279 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 HABP2Q14520 560 aaPredicted RBP4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 NAA25Q14CX7 972 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 TBCCQ15814 346 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 SHROOM1Q2M3G4 852 aaPredicted RBP4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 ALG11Q2TAA5 492 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 KBTBD12Q3ZCT8 623 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 ERMARDQ5T6L9 678 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 RRAGBQ5VZM2 374 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 ANO7Q6IWH7 933 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 TRMT10BQ6PF06 316 aaKnown RBP4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 PET117Q6UWS5 81 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 IKBIPQ70UQ0 350 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 RUFY3Q7L099 469 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 RAB11FIP2Q7L804 512 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 MICU3Q86XE3 530 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 KRT73Q86Y46 540 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 SCML4Q8N228 414 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 GALNT4Q8N4A0 578 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 DPP10Q8N608 796 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 POMGNT2Q8NAT1 580 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 TDRD5Q8NAT2 981 aaKnown RBP4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 ARRDC4Q8NCT1 418 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 DENND6BQ8NEG7 585 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 NFKBIDQ8NI38 313 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 GABPB2Q8TAK5 448 aaPredicted RBP4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 METTL6Q8TCB7 284 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 CCHCR1Q8TD31 782 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 CTNNBL1Q8WYA6 563 aaPredicted RBP4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 VPS33AQ96AX1 596 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 APOPT1Q96IL0 206 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 DYDC2Q96IM9 177 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 MRGPRX4Q96LA9 322 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 ZSWIM3Q96MP5 696 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 TRAPPC9Q96Q05 1148 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 RAB3IPQ96QF0 476 aaPredicted RBP4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 DMRTA2Q96SC8 542 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 VRK1Q99986 396 aaPredicted RBP4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 CRACR2AQ9BSW2 395 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 SPXQ9BT56 116 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 THUMPD3Q9BV44 507 aaKnown RBP4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 PITHD1Q9GZP4 211 aaPredicted RBP4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 PRO3102Q9H379 93 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 THAP9Q9H5L6 903 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 SMURF2Q9HAU4 748 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 SLC39A2Q9NP94 309 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 MID1IP1Q9NPA3 183 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 LANCL2Q9NS86 450 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 SNTG1Q9NSN8 517 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 POLR3BQ9NW08 1133 aaPredicted RBP4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 COQ3Q9NZJ6 369 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 SELENONQ9NZV5 590 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 MARCH4Q9P2E8 410 aaPredicted RBP4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 SAE1Q9UBE0 346 aaPredicted RBP4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 CA14Q9ULX7 337 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 HPCAL4Q9UM19 191 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 DNAJC16Q9Y2G8 782 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 PCDHA1Q9Y5I3 950 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 MAP1BP46821 2468 aaKnown RBP4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 KIAA0100Q14667 2235 aaKnown RBP4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 NHSQ6T4R5 1651 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 USP54Q70EL1 1684 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 GCC2Q8IWJ2 1684 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 OVOS2A0A0G2JMS6 1433 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 OVOS2A0A0J9YW53 1432 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 OVOS2Q6IE36 1432 aa4.03□□□□□ -1.76
AC055720.1-201ENST00000539552 DHX29Q7Z478 1369 aaKnown RBP4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 COL18A1P39060 1754 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 A0A087WZ62 844 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 A0A0B4J203 849 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 VWA3AA6NCI4 1184 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms