RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 CDKAL1Q5VV42 579 aa22.87■■□□□ 1.25
SCARB1-206ENST00000539320 RBM43Q6ZSC3 357 aaKnown RBP22.87■■□□□ 1.25
SCARB1-206ENST00000539320 NOP9Q86U38 636 aaKnown RBP22.87■■□□□ 1.25
SCARB1-206ENST00000539320 ERICH1Q86X53 443 aa22.87■■□□□ 1.25
SCARB1-206ENST00000539320 XYLT1Q86Y38 959 aa22.87■■□□□ 1.25
SCARB1-206ENST00000539320 NAXDQ8IW45 347 aa22.87■■□□□ 1.25
SCARB1-206ENST00000539320 STK40Q8N2I9 435 aa22.87■■□□□ 1.25
SCARB1-206ENST00000539320 MSANTD4Q8NCY6 345 aa22.87■■□□□ 1.25
SCARB1-206ENST00000539320 EPS8L1Q8TE68 723 aa22.87■■□□□ 1.25
SCARB1-206ENST00000539320 BIRC7Q96CA5 298 aa22.87■■□□□ 1.25
SCARB1-206ENST00000539320 C18orf8Q96DM3 657 aa22.87■■□□□ 1.25
SCARB1-206ENST00000539320 STK33Q9BYT3 514 aa22.87■■□□□ 1.25
SCARB1-206ENST00000539320 ADAM33Q9BZ11 813 aa22.87■■□□□ 1.25
SCARB1-206ENST00000539320 GANQ9H2C0 597 aa22.87■■□□□ 1.25
SCARB1-206ENST00000539320 GAREM1Q9H706 876 aa22.87■■□□□ 1.25
SCARB1-206ENST00000539320 TM9SF3Q9HD45 589 aa22.87■■□□□ 1.25
SCARB1-206ENST00000539320 OSGEPQ9NPF4 335 aa22.87■■□□□ 1.25
SCARB1-206ENST00000539320 IGF2RP11717 2491 aa22.87■■□□□ 1.25
SCARB1-206ENST00000539320 A0A1B0GVT2 93 aa22.86■■□□□ 1.25
SCARB1-206ENST00000539320 TOP3BO95985 862 aaKnown RBP22.86■■□□□ 1.25
SCARB1-206ENST00000539320 TPM2P07951 284 aa22.86■■□□□ 1.25
SCARB1-206ENST00000539320 ZNF883P0CG24 379 aa22.86■■□□□ 1.25
SCARB1-206ENST00000539320 TFE3P19532 575 aaPredicted RBP22.86■■□□□ 1.25
SCARB1-206ENST00000539320 SPINK2P20155 84 aa22.86■■□□□ 1.25
SCARB1-206ENST00000539320 CD27P26842 260 aa22.86■■□□□ 1.25
SCARB1-206ENST00000539320 GRIA4P48058 902 aa22.86■■□□□ 1.25
SCARB1-206ENST00000539320 RNASE9P60153 205 aaKnown RBP22.86■■□□□ 1.25
SCARB1-206ENST00000539320 FAM193AP78312 1265 aa22.86■■□□□ 1.25
SCARB1-206ENST00000539320 ELAVL3Q14576 367 aaKnown RBP22.86■■□□□ 1.25
SCARB1-206ENST00000539320 KRT31Q15323 416 aa22.86■■□□□ 1.25
SCARB1-206ENST00000539320 TEAD4Q15561 434 aa22.86■■□□□ 1.25
SCARB1-206ENST00000539320 KIAA0895LQ68EN5 471 aa22.86■■□□□ 1.25
SCARB1-206ENST00000539320 SND1Q7KZF4 910 aaKnown RBP eCLIP22.86■■□□□ 1.253e-10■■□□□ 12.9
SCARB1-206ENST00000539320 GPT2Q8TD30 523 aa22.86■■□□□ 1.25
SCARB1-206ENST00000539320 PTPRN2Q92932 1015 aa22.86■■□□□ 1.25
SCARB1-206ENST00000539320 PGAP3Q96FM1 320 aaPredicted RBP22.86■■□□□ 1.25
SCARB1-206ENST00000539320 PPP1R9BQ96SB3 815 aa22.86■■□□□ 1.25
SCARB1-206ENST00000539320 ARHGEF38Q9NXL2 777 aa22.86■■□□□ 1.25
SCARB1-206ENST00000539320 FZD4Q9ULV1 537 aa22.86■■□□□ 1.25
SCARB1-206ENST00000539320 FNDC3AQ9Y2H6 1198 aaKnown RBP22.86■■□□□ 1.25
SCARB1-206ENST00000539320 KMT2BQ9UMN6 2715 aaPredicted RBP22.86■■□□□ 1.25
SCARB1-206ENST00000539320 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.85■■□□□ 1.25
SCARB1-206ENST00000539320 FAM170AA1A519 330 aa22.85■■□□□ 1.25
SCARB1-206ENST00000539320 CLDN11O75508 207 aa22.85■■□□□ 1.25
SCARB1-206ENST00000539320 RNASEH2AO75792 299 aaKnown RBP22.85■■□□□ 1.25
SCARB1-206ENST00000539320 ADCY5O95622 1261 aa22.85■■□□□ 1.25
SCARB1-206ENST00000539320 ADH1BP00325 375 aa22.85■■□□□ 1.25
SCARB1-206ENST00000539320 SLC8A1P32418 973 aa22.85■■□□□ 1.25
SCARB1-206ENST00000539320 CSNK1EP49674 416 aaKnown RBP22.85■■□□□ 1.25
SCARB1-206ENST00000539320 CXCR3P49682 368 aa22.85■■□□□ 1.25
SCARB1-206ENST00000539320 NOMO3P69849 1222 aa22.85■■□□□ 1.25
SCARB1-206ENST00000539320 ZNF177Q13360 481 aaPredicted RBP22.85■■□□□ 1.25
SCARB1-206ENST00000539320 C5orf22Q49AR2 442 aa22.85■■□□□ 1.25
SCARB1-206ENST00000539320 C14orf80Q86SX3 495 aa22.85■■□□□ 1.25
SCARB1-206ENST00000539320 NT5C3BQ969T7 300 aa22.85■■□□□ 1.25
SCARB1-206ENST00000539320 ALG14Q96F25 216 aa22.85■■□□□ 1.25
SCARB1-206ENST00000539320 CAMK1GQ96NX5 476 aa22.85■■□□□ 1.25
SCARB1-206ENST00000539320 FAM129BQ96TA1 746 aa22.85■■□□□ 1.25
SCARB1-206ENST00000539320 TBCBQ99426 244 aa22.85■■□□□ 1.25
SCARB1-206ENST00000539320 OMDQ99983 421 aa22.85■■□□□ 1.25
SCARB1-206ENST00000539320 TKTL2Q9H0I9 626 aa22.85■■□□□ 1.25
SCARB1-206ENST00000539320 SIK2Q9H0K1 926 aa22.85■■□□□ 1.25
SCARB1-206ENST00000539320 VPS16Q9H269 839 aa22.85■■□□□ 1.25
SCARB1-206ENST00000539320 IL21RQ9HBE5 538 aa22.85■■□□□ 1.25
SCARB1-206ENST00000539320 ADAMTS1Q9UHI8 967 aa22.85■■□□□ 1.25
SCARB1-206ENST00000539320 SLC25A13Q9UJS0 675 aa22.85■■□□□ 1.25
SCARB1-206ENST00000539320 PAXBP1Q9Y5B6 917 aa22.85■■□□□ 1.25
SCARB1-206ENST00000539320 FAM47DPA6NHR8 397 aa22.84■■□□□ 1.25
SCARB1-206ENST00000539320 IGHV4-34P06331 123 aa22.84■■□□□ 1.25
SCARB1-206ENST00000539320 MMEP08473 750 aa22.84■■□□□ 1.25
SCARB1-206ENST00000539320 FLT3P36888 993 aa22.84■■□□□ 1.25
SCARB1-206ENST00000539320 VASPP50552 380 aaPredicted RBP22.84■■□□□ 1.25
SCARB1-206ENST00000539320 CDH4P55283 916 aa22.84■■□□□ 1.25
SCARB1-206ENST00000539320 DEUP1Q05D60 604 aa22.84■■□□□ 1.25
SCARB1-206ENST00000539320 HLA-BQ31612 363 aa22.84■■□□□ 1.25
SCARB1-206ENST00000539320 FKBP15Q5T1M5 1219 aa22.84■■□□□ 1.25
SCARB1-206ENST00000539320 NAA35Q5VZE5 725 aa22.84■■□□□ 1.25
SCARB1-206ENST00000539320 NCEH1Q6PIU2 408 aa22.84■■□□□ 1.25
SCARB1-206ENST00000539320 LRSAM1Q6UWE0 723 aa22.84■■□□□ 1.25
SCARB1-206ENST00000539320 OR52K2Q8NGK3 314 aa22.84■■□□□ 1.25
SCARB1-206ENST00000539320 ORAI3Q9BRQ5 295 aa22.84■■□□□ 1.25
SCARB1-206ENST00000539320 SCNM1Q9BWG6 230 aa22.84■■□□□ 1.25
SCARB1-206ENST00000539320 NEUROG2Q9H2A3 272 aa22.84■■□□□ 1.25
SCARB1-206ENST00000539320 WDCPQ9H6R7 721 aa22.84■■□□□ 1.25
SCARB1-206ENST00000539320 ANLNQ9NQW6 1124 aa22.84■■□□□ 1.25
SCARB1-206ENST00000539320 TM7SF3Q9NS93 570 aa22.84■■□□□ 1.25
SCARB1-206ENST00000539320 TMEM51Q9NW97 253 aa22.84■■□□□ 1.25
SCARB1-206ENST00000539320 VPS28Q9UK41 221 aa22.84■■□□□ 1.25
SCARB1-206ENST00000539320 LRRC72A6NJI9 287 aa22.83■■□□□ 1.25
SCARB1-206ENST00000539320 GOLGA8SH3BPF8 625 aa22.83■■□□□ 1.25
SCARB1-206ENST00000539320 HYAL3O43820 417 aaPredicted RBP22.83■■□□□ 1.25
SCARB1-206ENST00000539320 F9P00740 461 aa22.83■■□□□ 1.25
SCARB1-206ENST00000539320 VAV1P15498 845 aa22.83■■□□□ 1.25
SCARB1-206ENST00000539320 C5AR1P21730 350 aa22.83■■□□□ 1.25
SCARB1-206ENST00000539320 KLK7P49862 253 aa22.83■■□□□ 1.25
SCARB1-206ENST00000539320 GALCP54803 685 aa22.83■■□□□ 1.25
SCARB1-206ENST00000539320 KIF19Q2TAC6 998 aa22.83■■□□□ 1.25
SCARB1-206ENST00000539320 SLC25A52Q3SY17 297 aa22.83■■□□□ 1.25
SCARB1-206ENST00000539320 C2CD6Q53TS8 623 aa22.83■■□□□ 1.25
SCARB1-206ENST00000539320 LAYNQ6UX15 382 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms