RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 PLK2Q9NYY3 685 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 PPARGC1AQ9UBK2 798 aaKnown RBP17.72■□□□□ 0.43
CLN6-202ENST00000538696 DUSP12Q9UNI6 340 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 EFR3BQ9Y2G0 817 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 BHMG1C9JSJ3 638 aaPredicted RBP17.71■□□□□ 0.42
CLN6-202ENST00000538696 NEDD8-MDP1E9PL57 170 aa17.71■□□□□ 0.42
CLN6-202ENST00000538696 EEF2KO00418 725 aaKnown RBP17.71■□□□□ 0.42
CLN6-202ENST00000538696 CST8O60676 142 aa17.71■□□□□ 0.42
CLN6-202ENST00000538696 CYBBP04839 570 aa17.71■□□□□ 0.42
CLN6-202ENST00000538696 SRFP11831 508 aa17.71■□□□□ 0.42
CLN6-202ENST00000538696 GOT1P17174 413 aa17.71■□□□□ 0.42
CLN6-202ENST00000538696 IL4RP24394 825 aa17.71■□□□□ 0.42
CLN6-202ENST00000538696 TPI1P60174 286 aa17.71■□□□□ 0.42
CLN6-202ENST00000538696 DR1Q01658 176 aa17.71■□□□□ 0.42
CLN6-202ENST00000538696 GAD2Q05329 585 aa17.71■□□□□ 0.42
CLN6-202ENST00000538696 ANO4Q32M45 955 aa17.71■□□□□ 0.42
CLN6-202ENST00000538696 ITPRIPL2Q3MIP1 535 aa17.71■□□□□ 0.42
CLN6-202ENST00000538696 ALFQ53S48 1182 aa17.71■□□□□ 0.42
CLN6-202ENST00000538696 CCDC137Q6PK04 289 aaKnown RBP17.71■□□□□ 0.42
CLN6-202ENST00000538696 JAMLQ86YT9 394 aa17.71■□□□□ 0.42
CLN6-202ENST00000538696 GSPT2Q8IYD1 628 aaKnown RBP17.71■□□□□ 0.42
CLN6-202ENST00000538696 GJD3Q8N144 294 aa17.71■□□□□ 0.42
CLN6-202ENST00000538696 CCDC26Q8TAB7 109 aa17.71■□□□□ 0.42
CLN6-202ENST00000538696 DDI1Q8WTU0 396 aa17.71■□□□□ 0.42
CLN6-202ENST00000538696 RUBCNQ92622 972 aa17.71■□□□□ 0.42
CLN6-202ENST00000538696 FAF2Q96CS3 445 aa17.71■□□□□ 0.42
CLN6-202ENST00000538696 TMA16Q96EY4 203 aaKnown RBP17.71■□□□□ 0.42
CLN6-202ENST00000538696 BBS2Q9BXC9 721 aa17.71■□□□□ 0.42
CLN6-202ENST00000538696 TRPV5Q9NQA5 729 aa17.71■□□□□ 0.42
CLN6-202ENST00000538696 SLC2A4RGQ9NR83 387 aa17.71■□□□□ 0.42
CLN6-202ENST00000538696 MPP6Q9NZW5 540 aa17.71■□□□□ 0.42
CLN6-202ENST00000538696 CWC15Q9P013 229 aaKnown RBP17.71■□□□□ 0.42
CLN6-202ENST00000538696 PCYOX1Q9UHG3 505 aa17.71■□□□□ 0.42
CLN6-202ENST00000538696 SORCS3Q9UPU3 1222 aa17.71■□□□□ 0.42
CLN6-202ENST00000538696 UNC80Q8N2C7 3258 aa17.7■□□□□ 0.42
CLN6-202ENST00000538696 ESYT3A0FGR9 886 aa17.7■□□□□ 0.42
CLN6-202ENST00000538696 FAM187AA6NFU0 413 aa17.7■□□□□ 0.42
CLN6-202ENST00000538696 H3BRJ5 948 aa17.7■□□□□ 0.42
CLN6-202ENST00000538696 TYRP14679 529 aa17.7■□□□□ 0.42
CLN6-202ENST00000538696 HTR7P34969 479 aa17.7■□□□□ 0.42
CLN6-202ENST00000538696 CLCN6P51797 869 aa17.7■□□□□ 0.42
CLN6-202ENST00000538696 ZNF135P52742 658 aaPredicted RBP17.7■□□□□ 0.42
CLN6-202ENST00000538696 GUCY2DQ02846 1103 aa17.7■□□□□ 0.42
CLN6-202ENST00000538696 DPYSQ14117 519 aa17.7■□□□□ 0.42
CLN6-202ENST00000538696 DHX34Q14147 1143 aaKnown RBP17.7■□□□□ 0.42
CLN6-202ENST00000538696 BRD3Q15059 726 aa17.7■□□□□ 0.42
CLN6-202ENST00000538696 MPP7Q5T2T1 576 aa17.7■□□□□ 0.42
CLN6-202ENST00000538696 TTC39BQ5VTQ0 682 aaPredicted RBP17.7■□□□□ 0.42
CLN6-202ENST00000538696 RWDD4Q6NW29 188 aaKnown RBP17.7■□□□□ 0.42
CLN6-202ENST00000538696 RFX8Q6ZV50 586 aa17.7■□□□□ 0.42
CLN6-202ENST00000538696 C12orf40Q86WS4 652 aa17.7■□□□□ 0.42
CLN6-202ENST00000538696 MAP7D3Q8IWC1 876 aa17.7■□□□□ 0.42
CLN6-202ENST00000538696 PQLC3Q8N755 202 aa17.7■□□□□ 0.42
CLN6-202ENST00000538696 CSGALNACT1Q8TDX6 532 aa17.7■□□□□ 0.42
CLN6-202ENST00000538696 CASKIN2Q8WXE0 1202 aa17.7■□□□□ 0.42
CLN6-202ENST00000538696 CHFRQ96EP1 664 aa17.7■□□□□ 0.42
CLN6-202ENST00000538696 RUNDC3BQ96NL0 473 aa17.7■□□□□ 0.42
CLN6-202ENST00000538696 CSPG4P5Q96PW8 444 aa17.7■□□□□ 0.42
CLN6-202ENST00000538696 RNF157Q96PX1 679 aa17.7■□□□□ 0.42
CLN6-202ENST00000538696 ZNF670Q9BS34 389 aa17.7■□□□□ 0.42
CLN6-202ENST00000538696 ZYG11BQ9C0D3 744 aa17.7■□□□□ 0.42
CLN6-202ENST00000538696 GDF3Q9NR23 364 aa17.7■□□□□ 0.42
CLN6-202ENST00000538696 RCOR3Q9P2K3 495 aaPredicted RBP17.7■□□□□ 0.42
CLN6-202ENST00000538696 ZNF212Q9UDV6 495 aa17.7■□□□□ 0.42
CLN6-202ENST00000538696 CLEC4EQ9ULY5 219 aa17.7■□□□□ 0.42
CLN6-202ENST00000538696 NYNRINQ9P2P1 1898 aaKnown RBP17.69■□□□□ 0.42
CLN6-202ENST00000538696 A0A1B0GVM2 712 aa17.69■□□□□ 0.42
CLN6-202ENST00000538696 TYW5A2RUC4 315 aaKnown RBP17.69■□□□□ 0.42
CLN6-202ENST00000538696 TCAF2A6NFQ2 919 aa17.69■□□□□ 0.42
CLN6-202ENST00000538696 ZNF487B1APH4 448 aa17.69■□□□□ 0.42
CLN6-202ENST00000538696 LIASO43766 372 aa17.69■□□□□ 0.42
CLN6-202ENST00000538696 TUBBP07437 444 aa17.69■□□□□ 0.42
CLN6-202ENST00000538696 PECAM1P16284 738 aaPredicted RBP17.69■□□□□ 0.42
CLN6-202ENST00000538696 EPHB2P29323 1055 aa17.69■□□□□ 0.42
CLN6-202ENST00000538696 GJA4P35212 333 aa17.69■□□□□ 0.42
CLN6-202ENST00000538696 ARL4AP40617 200 aa17.69■□□□□ 0.42
CLN6-202ENST00000538696 SOX9P48436 509 aa17.69■□□□□ 0.42
CLN6-202ENST00000538696 CCNG2Q16589 344 aa17.69■□□□□ 0.42
CLN6-202ENST00000538696 ANKRD20A8PQ5CZ79 823 aa17.69■□□□□ 0.42
CLN6-202ENST00000538696 IER5LQ5T953 404 aa17.69■□□□□ 0.42
CLN6-202ENST00000538696 CHST9Q7L1S5 443 aa17.69■□□□□ 0.42
CLN6-202ENST00000538696 MAATS1Q7Z4T9 603 aa17.69■□□□□ 0.42
CLN6-202ENST00000538696 NLRP14Q86W24 1093 aa17.69■□□□□ 0.42
CLN6-202ENST00000538696 VSIG1Q86XK7 387 aa17.69■□□□□ 0.42
CLN6-202ENST00000538696 ETFBKMTQ8IXQ9 262 aa17.69■□□□□ 0.42
CLN6-202ENST00000538696 CCDC105Q8IYK2 499 aa17.69■□□□□ 0.42
CLN6-202ENST00000538696 PCDH19Q8TAB3 1148 aa17.69■□□□□ 0.42
CLN6-202ENST00000538696 WFDC5Q8TCV5 224 aa17.69■□□□□ 0.42
CLN6-202ENST00000538696 EPB41L5Q9HCM4 733 aa17.69■□□□□ 0.42
CLN6-202ENST00000538696 HOMER3Q9NSC5 361 aa17.69■□□□□ 0.42
CLN6-202ENST00000538696 NUP205Q92621 2012 aa17.69■□□□□ 0.42
CLN6-202ENST00000538696 FGF10O15520 208 aaPredicted RBP17.68■□□□□ 0.42
CLN6-202ENST00000538696 CACNG3O60359 315 aa17.68■□□□□ 0.42
CLN6-202ENST00000538696 LUC7L3O95232 432 aaKnown RBP17.68■□□□□ 0.42
CLN6-202ENST00000538696 MYBL2P10244 700 aa17.68■□□□□ 0.42
CLN6-202ENST00000538696 RHOQP17081 205 aa17.68■□□□□ 0.42
CLN6-202ENST00000538696 HCAR3P49019 387 aa17.68■□□□□ 0.42
CLN6-202ENST00000538696 CDH4P55283 916 aa17.68■□□□□ 0.42
CLN6-202ENST00000538696 OTUD4Q01804 1114 aaKnown RBP17.68■□□□□ 0.42
CLN6-202ENST00000538696 PFKPQ01813 784 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms