RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 RTN4RL1Q86UN2 441 aaPredicted RBP11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 SPATA2LQ8IUW3 424 aaPredicted RBP11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 UTP4Q969X6 686 aaKnown RBP11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 SKA1Q96BD8 255 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 CPNE1Q99829 537 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 TUBB6Q9BUF5 446 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 RGS18Q9NS28 235 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 ZFATQ9P243 1243 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 PTPRDP23468 1912 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 ZCWPW2A0A1B0GU75 182 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 TPP1O14773 563 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 GLRA3O75311 464 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 USP12O75317 370 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 USP1O94782 785 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 CBX6O95503 412 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 EOMESO95936 686 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 JCHAINP01591 159 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 ERVK-10P10266 1014 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 NFKB1P19838 968 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 SLC8A1P32418 973 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 SLC5A3P53794 718 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 YWHAHQ04917 246 aaPredicted RBP11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 DSC1Q08554 894 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 PDE1CQ14123 709 aaPredicted RBP11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 INSCQ1MX18 579 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 ARTNQ5T4W7 220 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 GRTP1Q5TC63 336 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 MANEALQ5VSG8 457 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 CES3Q6UWW8 571 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 SCD5Q86SK9 330 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 RASSF3Q86WH2 238 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 SMOC2Q9H3U7 446 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 KCNK4Q9NYG8 393 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 DCDC2Q9UHG0 476 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 LNPEPQ9UIQ6 1025 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 ADAM28Q9UKQ2 775 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 EMCNQ9ULC0 261 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 NLRC5Q86WI3 1866 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 FAM237BA0A1B0GVD1 139 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 ARHGAP42A6NI28 874 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 PSMD3O43242 534 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 B4GALT3O60512 393 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 TOP3BO95985 862 aaKnown RBP11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 MYL2P10916 166 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 ELNP15502 786 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 CCNCP24863 283 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 FAM189BP81408 668 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 ANKRD20A4Q4UJ75 823 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 BTBD8Q5XKL5 378 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 FAM91A1Q658Y4 838 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 TRAF7Q6Q0C0 670 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 GLB1LQ6UWU2 654 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 ARHGAP12Q8IWW6 846 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 CNTD1Q8N815 330 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 DNAAF3Q8N9W5 541 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 ISL2Q96A47 359 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 ZNF669Q96BR6 464 aaPredicted RBP11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 CELF6Q96J87 481 aaKnown RBP11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 RNF186Q9NXI6 227 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 STK38LQ9Y2H1 464 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 TMEM189-UBE2V1I3L0A0 370 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 AP3B1O00203 1094 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 PLIN3O60664 434 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 DDHD2O94830 711 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 OAZ2O95190 189 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 SRGAP2BP0DMP2 458 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 CKBP12277 381 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 DNAJB2P25686 324 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 PTPN4P29074 926 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 CCR1P32246 355 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 GRIK1P39086 918 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 MAGEA12P43365 314 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 PGFP49763 221 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 ACLYP53396 1101 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 PDE1BQ01064 536 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 PRPSAP1Q14558 356 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 PPP2R5DQ14738 602 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 CERCAMQ5T4B2 595 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 RWDD4Q6NW29 188 aaKnown RBP11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 SLC24A5Q71RS6 500 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 CCDC91Q7Z6B0 441 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 RNF180Q86T96 592 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 ZNF280BQ86YH2 543 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 LZTR1Q8N653 840 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 ATP2A3Q93084 1043 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 HHIPL1Q96JK4 782 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 IL22Q9GZX6 179 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 SIK2Q9H0K1 926 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 TLE6Q9H808 572 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 TXNDC16Q9P2K2 825 aa11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 ABT1Q9ULW3 272 aaKnown RBP11.67□□□□□ -0.54
SLC28A1-204ENST00000538177 PATJQ8NI35 1801 aa11.66□□□□□ -0.54
SLC28A1-204ENST00000538177 CASP8AP2Q9UKL3 1982 aa11.66□□□□□ -0.54
SLC28A1-204ENST00000538177 FGF10O15520 208 aaPredicted RBP11.66□□□□□ -0.54
SLC28A1-204ENST00000538177 PAGE1O75459 146 aa11.66□□□□□ -0.54
SLC28A1-204ENST00000538177 HAUS5O94927 633 aa11.66□□□□□ -0.54
SLC28A1-204ENST00000538177 SERPINB3P29508 390 aa11.66□□□□□ -0.54
SLC28A1-204ENST00000538177 SPRP35270 261 aaPredicted RBP11.66□□□□□ -0.54
SLC28A1-204ENST00000538177 ZBTB16Q05516 673 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms