RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 ZFP14Q9HCL3 533 aa12.66□□□□□ -0.38
SCARB1-204ENST00000535005 BATF3Q9NR55 127 aa12.66□□□□□ -0.38
SCARB1-204ENST00000535005 TBC1D14Q9P2M4 693 aa12.66□□□□□ -0.38
SCARB1-204ENST00000535005 FAM153AQ9UHL3 310 aa12.66□□□□□ -0.38
SCARB1-204ENST00000535005 FAM50BQ9Y247 325 aa12.66□□□□□ -0.38
SCARB1-204ENST00000535005 NFS1Q9Y697 457 aa12.66□□□□□ -0.38
SCARB1-204ENST00000535005 IGLV3-10A0A075B6K4 115 aa12.65□□□□□ -0.38
SCARB1-204ENST00000535005 DRGXA6NNA5 263 aa12.65□□□□□ -0.38
SCARB1-204ENST00000535005 ANHXE9PGG2 379 aa12.65□□□□□ -0.38
SCARB1-204ENST00000535005 FAM72CH0Y354 149 aa12.65□□□□□ -0.38
SCARB1-204ENST00000535005 KCNK3O14649 394 aa12.65□□□□□ -0.38
SCARB1-204ENST00000535005 SLC9A3R1O14745 358 aaPredicted RBP12.65□□□□□ -0.38
SCARB1-204ENST00000535005 PYGMP11217 842 aa12.65□□□□□ -0.38
SCARB1-204ENST00000535005 TACR2P21452 398 aa12.65□□□□□ -0.38
SCARB1-204ENST00000535005 IL4RP24394 825 aa12.65□□□□□ -0.38
SCARB1-204ENST00000535005 HOXC13P31276 330 aa12.65□□□□□ -0.38
SCARB1-204ENST00000535005 PTPN7P35236 360 aa12.65□□□□□ -0.38
SCARB1-204ENST00000535005 HSD17B3P37058 310 aa12.65□□□□□ -0.38
SCARB1-204ENST00000535005 CDH6P55285 790 aa12.65□□□□□ -0.38
SCARB1-204ENST00000535005 AUHQ13825 339 aaKnown RBP12.65□□□□□ -0.38
SCARB1-204ENST00000535005 DPYSL3Q14195 570 aa12.65□□□□□ -0.38
SCARB1-204ENST00000535005 FAM72AQ5TYM5 149 aa12.65□□□□□ -0.38
SCARB1-204ENST00000535005 DCAF12L1Q5VU92 463 aa12.65□□□□□ -0.38
SCARB1-204ENST00000535005 TANGO2Q6ICL3 276 aa12.65□□□□□ -0.38
SCARB1-204ENST00000535005 FAM72DQ6L9T8 149 aa12.65□□□□□ -0.38
SCARB1-204ENST00000535005 MTSS1LQ765P7 747 aa12.65□□□□□ -0.38
SCARB1-204ENST00000535005 FAM72BQ86X60 149 aa12.65□□□□□ -0.38
SCARB1-204ENST00000535005 BPIFB1Q8TDL5 484 aa12.65□□□□□ -0.38
SCARB1-204ENST00000535005 FAF2Q96CS3 445 aa12.65□□□□□ -0.38
SCARB1-204ENST00000535005 KRT12Q99456 494 aa12.65□□□□□ -0.38
SCARB1-204ENST00000535005 EPAS1Q99814 870 aa12.65□□□□□ -0.38
SCARB1-204ENST00000535005 ZNF670Q9BS34 389 aa12.65□□□□□ -0.38
SCARB1-204ENST00000535005 SIK2Q9H0K1 926 aa12.65□□□□□ -0.38
SCARB1-204ENST00000535005 RABEP2Q9H5N1 569 aa12.65□□□□□ -0.38
SCARB1-204ENST00000535005 PRDM16Q9HAZ2 1276 aa12.65□□□□□ -0.38
SCARB1-204ENST00000535005 CD248Q9HCU0 757 aa12.65□□□□□ -0.38
SCARB1-204ENST00000535005 PPARGC1AQ9UBK2 798 aaKnown RBP12.65□□□□□ -0.38
SCARB1-204ENST00000535005 EFR3BQ9Y2G0 817 aa12.65□□□□□ -0.38
SCARB1-204ENST00000535005 LRRD1A4D1F6 860 aa12.65□□□□□ -0.39
SCARB1-204ENST00000535005 CFAP73A6NFT4 308 aa12.65□□□□□ -0.39
SCARB1-204ENST00000535005 HEPACAM2A8MVW5 462 aa12.65□□□□□ -0.39
SCARB1-204ENST00000535005 H3BRJ5 948 aa12.65□□□□□ -0.39
SCARB1-204ENST00000535005 MGRN1O60291 552 aa12.65□□□□□ -0.39
SCARB1-204ENST00000535005 ECI2O75521 394 aa12.65□□□□□ -0.39
SCARB1-204ENST00000535005 LRIG2O94898 1065 aa12.65□□□□□ -0.39
SCARB1-204ENST00000535005 CD48P09326 243 aa12.65□□□□□ -0.39
SCARB1-204ENST00000535005 CXCR5P32302 372 aa12.65□□□□□ -0.39
SCARB1-204ENST00000535005 CHKAP35790 457 aa12.65□□□□□ -0.39
SCARB1-204ENST00000535005 CETN2P41208 172 aa12.65□□□□□ -0.39
SCARB1-204ENST00000535005 CDKN2BP42772 138 aa12.65□□□□□ -0.39
SCARB1-204ENST00000535005 KRT81Q14533 505 aa12.65□□□□□ -0.39
SCARB1-204ENST00000535005 ZFYVE27Q5T4F4 411 aa12.65□□□□□ -0.39
SCARB1-204ENST00000535005 RAP1GAP2Q684P5 730 aa12.65□□□□□ -0.39
SCARB1-204ENST00000535005 PTCRAQ6ISU1 281 aaPredicted RBP12.65□□□□□ -0.39
SCARB1-204ENST00000535005 MFSD7Q6UXD7 560 aa12.65□□□□□ -0.39
SCARB1-204ENST00000535005 SPOCD1Q6ZMY3 1216 aa12.65□□□□□ -0.39
SCARB1-204ENST00000535005 C14orf80Q86SX3 495 aa12.65□□□□□ -0.39
SCARB1-204ENST00000535005 CHSY1Q86X52 802 aa12.65□□□□□ -0.39
SCARB1-204ENST00000535005 MFSD6LQ8IWD5 586 aa12.65□□□□□ -0.39
SCARB1-204ENST00000535005 BBS7Q8IWZ6 715 aa12.65□□□□□ -0.39
SCARB1-204ENST00000535005 ZDHHC14Q8IZN3 488 aa12.65□□□□□ -0.39
SCARB1-204ENST00000535005 N4BP2L2Q92802 583 aaPredicted RBP12.65□□□□□ -0.39
SCARB1-204ENST00000535005 RNF25Q96BH1 459 aaPredicted RBP12.65□□□□□ -0.39
SCARB1-204ENST00000535005 SEC16BQ96JE7 1060 aa12.65□□□□□ -0.39
SCARB1-204ENST00000535005 RETREG1Q9H6L5 497 aa12.65□□□□□ -0.39
SCARB1-204ENST00000535005 KLHL11Q9NVR0 708 aa12.65□□□□□ -0.39
SCARB1-204ENST00000535005 SNX10Q9Y5X0 201 aa12.65□□□□□ -0.39
SCARB1-204ENST00000535005 E9PAM4 449 aa12.64□□□□□ -0.39
SCARB1-204ENST00000535005 F5H5T6 163 aa12.64□□□□□ -0.39
SCARB1-204ENST00000535005 PI4K2BG5E9Z4 385 aa12.64□□□□□ -0.39
SCARB1-204ENST00000535005 RAD51CO43502 376 aa12.64□□□□□ -0.39
SCARB1-204ENST00000535005 SLC6A4P31645 630 aa12.64□□□□□ -0.39
SCARB1-204ENST00000535005 ARL4AP40617 200 aa12.64□□□□□ -0.39
SCARB1-204ENST00000535005 DNA2P51530 1060 aa12.64□□□□□ -0.39
SCARB1-204ENST00000535005 SEC24CP53992 1094 aa12.64□□□□□ -0.39
SCARB1-204ENST00000535005 ZNF844Q08AG5 666 aa12.64□□□□□ -0.39
SCARB1-204ENST00000535005 FCHO2Q0JRZ9 810 aa12.64□□□□□ -0.39
SCARB1-204ENST00000535005 ITIH4Q14624 930 aa12.64□□□□□ -0.39
SCARB1-204ENST00000535005 ODF2Q5BJF6 829 aa12.64□□□□□ -0.39
SCARB1-204ENST00000535005 PPP6R3Q5H9R7 873 aaPredicted RBP12.64□□□□□ -0.39
SCARB1-204ENST00000535005 FBXL22Q6P050 247 aa12.64□□□□□ -0.39
SCARB1-204ENST00000535005 HOOK3Q86VS8 718 aa12.64□□□□□ -0.39
SCARB1-204ENST00000535005 ANKS4BQ8N8V4 417 aa12.64□□□□□ -0.39
SCARB1-204ENST00000535005 TDRD5Q8NAT2 981 aaKnown RBP12.64□□□□□ -0.39
SCARB1-204ENST00000535005 DEPDC1BQ8WUY9 529 aa12.64□□□□□ -0.39
SCARB1-204ENST00000535005 SEC14L1Q92503 715 aa12.64□□□□□ -0.39
SCARB1-204ENST00000535005 NXPE3Q969Y0 559 aa12.64□□□□□ -0.39
SCARB1-204ENST00000535005 TBC1D31Q96DN5 1066 aa12.64□□□□□ -0.39
SCARB1-204ENST00000535005 CSPG4P5Q96PW8 444 aa12.64□□□□□ -0.39
SCARB1-204ENST00000535005 RNF157Q96PX1 679 aa12.64□□□□□ -0.39
SCARB1-204ENST00000535005 FAM114A2Q9NRY5 505 aa12.64□□□□□ -0.39
SCARB1-204ENST00000535005 NEU3Q9UQ49 428 aa12.64□□□□□ -0.39
SCARB1-204ENST00000535005 NR2E1Q9Y466 385 aa12.64□□□□□ -0.39
SCARB1-204ENST00000535005 hCG_1818297A0A087WSY0 165 aa12.63□□□□□ -0.39
SCARB1-204ENST00000535005 PGRMC1O00264 195 aaKnown RBP12.63□□□□□ -0.39
SCARB1-204ENST00000535005 EEF2KO00418 725 aaKnown RBP12.63□□□□□ -0.39
SCARB1-204ENST00000535005 GOT1P17174 413 aa12.63□□□□□ -0.39
SCARB1-204ENST00000535005 SCTRP47872 440 aa12.63□□□□□ -0.39
SCARB1-204ENST00000535005 SATB1Q01826 763 aa12.63□□□□□ -0.39
SCARB1-204ENST00000535005 ZNF211Q13398 564 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms