RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 RUFY1Q96T51 708 aa4.6□□□□□ -1.67
ITGB1-219ENST00000534049 SH3GL1Q99961 368 aa4.6□□□□□ -1.67
ITGB1-219ENST00000534049 QTRT1Q9BXR0 403 aaKnown RBP4.6□□□□□ -1.67
ITGB1-219ENST00000534049 SEZ6LQ9BYH1 1024 aa4.6□□□□□ -1.67
ITGB1-219ENST00000534049 PRKRIP1Q9H875 184 aaPredicted RBP4.6□□□□□ -1.67
ITGB1-219ENST00000534049 NKX1-2Q9UD57 310 aaPredicted RBP4.6□□□□□ -1.67
ITGB1-219ENST00000534049 EVC2Q86UK5 1308 aa4.6□□□□□ -1.67
ITGB1-219ENST00000534049 ADGRF5Q8IZF2 1346 aa4.6□□□□□ -1.67
ITGB1-219ENST00000534049 TCRBV5S1A1TA0A578 114 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 KCNU1A8MYU2 1149 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 E5RJQ4 531 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 H7C4K7 107 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 TPP1O14773 563 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 PPEF2O14830 753 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 SNX2O60749 519 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 ATRNO75882 1429 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 ERLIN2O94905 339 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 MAP4K4O95819 1239 aaPredicted RBP4.59□□□□□ -1.67
ITGB1-219ENST00000534049 MBD3O95983 291 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 MYL1P05976 194 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 PTPRCP08575 1304 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 GLI3P10071 1580 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 IDO1P14902 403 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 ATF3P18847 181 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 GPTP24298 496 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 IL1R2P27930 398 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 HOXD10P28358 340 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 ALDH5A1P51649 535 aaPredicted RBP4.59□□□□□ -1.67
ITGB1-219ENST00000534049 ZNF132P52740 706 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 LMAN2Q12907 356 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 KLF9Q13886 244 aaPredicted RBP4.59□□□□□ -1.67
ITGB1-219ENST00000534049 LARS2Q15031 903 aaKnown RBP4.59□□□□□ -1.67
ITGB1-219ENST00000534049 ETFDHQ16134 617 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 WLSQ5T9L3 541 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 MEX3CQ5U5Q3 659 aaKnown RBP4.59□□□□□ -1.67
ITGB1-219ENST00000534049 NUGGCQ68CJ6 796 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 CCDC70Q6NSX1 233 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 TMEM65Q6PI78 240 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 ZDHHC24Q6UX98 284 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 MRPL10Q7Z7H8 261 aaKnown RBP4.59□□□□□ -1.67
ITGB1-219ENST00000534049 CEP57Q86XR8 500 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 PEX5LQ8IYB4 626 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 LINC01465Q8N7H1 131 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 SMYD1Q8NB12 490 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 ATP11CQ8NB49 1132 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 CCDC150Q8NCX0 1101 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 ZNF398Q8TD17 642 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 TEKT4Q8WW24 435 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 HMCESQ96FZ2 354 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 ZDHHC12Q96GR4 267 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 VPS50Q96JG6 964 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 CABS1Q96KC9 395 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 HS6ST2Q96MM7 605 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 IWS1Q96ST2 819 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 MAP3K5Q99683 1374 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 ATXN2Q99700 1313 aaKnown RBP4.59□□□□□ -1.67
ITGB1-219ENST00000534049 RPAP1Q9BWH6 1393 aaPredicted RBP4.59□□□□□ -1.67
ITGB1-219ENST00000534049 ANKRD30BQ9BXX2 1392 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 UBXN6Q9BZV1 441 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 LRRCC1Q9C099 1032 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.59□□□□□ -1.67
ITGB1-219ENST00000534049 NACA2Q9H009 215 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 YTHDC2Q9H6S0 1430 aaKnown RBP4.59□□□□□ -1.67
ITGB1-219ENST00000534049 MGAT4CQ9UBM8 478 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 STEAP1Q9UHE8 339 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 CRYBG1Q9Y4K1 1723 aa4.59□□□□□ -1.67
ITGB1-219ENST00000534049 TRPM3Q9HCF6 1732 aaPredicted RBP4.58□□□□□ -1.68
ITGB1-219ENST00000534049 ABCC11Q96J66 1382 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 RAB3GAP2Q9H2M9 1393 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 AFF2P51816 1311 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 ZNF521Q96K83 1311 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 PABPN1LA6NDY0 278 aaKnown RBP4.58□□□□□ -1.68
ITGB1-219ENST00000534049 A6NNZ2 444 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 TMEM110-MUSTN1A8MSY1 372 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 VSTM5A8MXK1 200 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 FAM25EA8MYX2 175 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 H3BNC9 293 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 RAB27BO00194 218 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 LIN7AO14910 233 aaPredicted RBP4.58□□□□□ -1.68
ITGB1-219ENST00000534049 TP73O15350 636 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 TOP3BO95985 862 aaKnown RBP4.58□□□□□ -1.68
ITGB1-219ENST00000534049 PEX2P28328 305 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 HNRNPH1P31943 449 aaKnown RBP4.58□□□□□ -1.68
ITGB1-219ENST00000534049 CARSP49589 748 aaKnown RBP4.58□□□□□ -1.68
ITGB1-219ENST00000534049 DIO1P49895 249 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 RPS16P62249 146 aaKnown RBP4.58□□□□□ -1.68
ITGB1-219ENST00000534049 PSG6Q00889 435 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 ROR2Q01974 943 aaKnown RBP4.58□□□□□ -1.68
ITGB1-219ENST00000534049 GHRHRQ02643 423 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 MAPK7Q13164 816 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 DYNC1I2Q13409 638 aaKnown RBP4.58□□□□□ -1.68
ITGB1-219ENST00000534049 TRIM29Q14134 588 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 LRRC41Q15345 812 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 TUBB8Q3ZCM7 444 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 C3orf38Q5JPI3 329 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 ISM2Q6H9L7 571 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 ARHGAP22Q7Z5H3 698 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 PCGF5Q86SE9 256 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 SKAP1Q86WV1 359 aa4.58□□□□□ -1.68
ITGB1-219ENST00000534049 KRT73Q86Y46 540 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms