RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 ERP44Q9BS26 406 aa11.26□□□□□ -0.61
CCDC90B-218ENST00000533761 PHF7Q9BWX1 381 aaPredicted RBP11.26□□□□□ -0.61
CCDC90B-218ENST00000533761 SLC46A2Q9BY10 475 aa11.26□□□□□ -0.61
CCDC90B-218ENST00000533761 TSPYL1Q9H0U9 437 aa11.26□□□□□ -0.61
CCDC90B-218ENST00000533761 ARFGAP3Q9NP61 516 aa11.26□□□□□ -0.61
CCDC90B-218ENST00000533761 PRDM6Q9NQX0 595 aa11.26□□□□□ -0.61
CCDC90B-218ENST00000533761 GPATCH2LQ9NWQ4 482 aa11.26□□□□□ -0.61
CCDC90B-218ENST00000533761 OSER1Q9NX31 292 aa11.26□□□□□ -0.61
CCDC90B-218ENST00000533761 CWC15Q9P013 229 aaKnown RBP11.26□□□□□ -0.61
CCDC90B-218ENST00000533761 CALCOCO1Q9P1Z2 691 aa11.26□□□□□ -0.61
CCDC90B-218ENST00000533761 NR2E1Q9Y466 385 aa11.26□□□□□ -0.61
CCDC90B-218ENST00000533761 DNMT3AQ9Y6K1 912 aaPredicted RBP11.26□□□□□ -0.61
CCDC90B-218ENST00000533761 TCRBV7S2A1N4TA0A589 114 aa11.25□□□□□ -0.61
CCDC90B-218ENST00000533761 C2orf78A6NCI8 922 aa11.25□□□□□ -0.61
CCDC90B-218ENST00000533761 TTI1O43156 1089 aa11.25□□□□□ -0.61
CCDC90B-218ENST00000533761 MSI1O43347 362 aaKnown RBP11.25□□□□□ -0.61
CCDC90B-218ENST00000533761 COCHO43405 550 aa11.25□□□□□ -0.61
CCDC90B-218ENST00000533761 PAGE1O75459 146 aa11.25□□□□□ -0.61
CCDC90B-218ENST00000533761 OAS1P00973 400 aaKnown RBP11.25□□□□□ -0.61
CCDC90B-218ENST00000533761 GOT1P17174 413 aa11.25□□□□□ -0.61
CCDC90B-218ENST00000533761 EIF3EP60228 445 aaKnown RBP11.25□□□□□ -0.61
CCDC90B-218ENST00000533761 CAV1Q03135 178 aa11.25□□□□□ -0.61
CCDC90B-218ENST00000533761 SNX1Q13596 522 aa11.25□□□□□ -0.61
CCDC90B-218ENST00000533761 PDK1Q15118 436 aa11.25□□□□□ -0.61
CCDC90B-218ENST00000533761 NOMO1Q15155 1222 aa11.25□□□□□ -0.61
CCDC90B-218ENST00000533761 CA9Q16790 459 aa11.25□□□□□ -0.61
CCDC90B-218ENST00000533761 STXBP5Q5T5C0 1151 aa11.25□□□□□ -0.61
CCDC90B-218ENST00000533761 PLD5Q8N7P1 536 aa11.25□□□□□ -0.61
CCDC90B-218ENST00000533761 PCDH19Q8TAB3 1148 aa11.25□□□□□ -0.61
CCDC90B-218ENST00000533761 HNRNPLLQ8WVV9 542 aaKnown RBP11.25□□□□□ -0.61
CCDC90B-218ENST00000533761 ATG4AQ8WYN0 398 aa11.25□□□□□ -0.61
CCDC90B-218ENST00000533761 TBC1D31Q96DN5 1066 aa11.25□□□□□ -0.61
CCDC90B-218ENST00000533761 SLC39A13Q96H72 371 aa11.25□□□□□ -0.61
CCDC90B-218ENST00000533761 FCRL2Q96LA5 508 aaPredicted RBP11.25□□□□□ -0.61
CCDC90B-218ENST00000533761 CYP2S1Q96SQ9 504 aa11.25□□□□□ -0.61
CCDC90B-218ENST00000533761 CCSER2Q9H7U1 834 aa11.25□□□□□ -0.61
CCDC90B-218ENST00000533761 EPB41L5Q9HCM4 733 aa11.25□□□□□ -0.61
CCDC90B-218ENST00000533761 ARHGEF4Q9NR80 690 aa11.25□□□□□ -0.61
CCDC90B-218ENST00000533761 ASIC3Q9UHC3 531 aa11.25□□□□□ -0.61
CCDC90B-218ENST00000533761 HEY1Q9Y5J3 304 aa11.25□□□□□ -0.61
CCDC90B-218ENST00000533761 C5orf42Q9H799 3197 aa11.25□□□□□ -0.61
CCDC90B-218ENST00000533761 DENND4CQ5VZ89 1909 aa11.25□□□□□ -0.61
CCDC90B-218ENST00000533761 TYW5A2RUC4 315 aaKnown RBP11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 H7C0C1 242 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 SGK1O00141 431 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 MTSS1O43312 755 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 LATS1O95835 1130 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 OLFM2O95897 454 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 MOCS2O96007 188 aaPredicted RBP11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 IGLV3-27P01718 113 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 RBP3P10745 1247 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 IL4RP24394 825 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 WEE1P30291 646 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 ATP5OP48047 213 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 SLC7A5Q01650 507 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 SEMA3BQ13214 749 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 HLTFQ14527 1009 aaKnown RBP eCLIP11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 GLIPR1L2Q4G1C9 344 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 RAB6CQ53S08 254 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 RWDD4Q6NW29 188 aaKnown RBP11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 EMBQ6PCB8 327 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 DARS2Q6PI48 645 aaKnown RBP11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 PCGF5Q86SE9 256 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 DDX42Q86XP3 938 aaKnown RBP eCLIP11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 LRRC49Q8IUZ0 686 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 ARL14EPQ8N8R7 260 aaPredicted RBP11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 TDRD5Q8NAT2 981 aaKnown RBP11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 SLC35B2Q8TB61 432 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 ZSCAN18Q8TBC5 510 aaPredicted RBP11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 SMARCD2Q92925 531 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 AZIN2Q96A70 460 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 LRRC45Q96CN5 670 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 ZSWIM3Q96MP5 696 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 RNF38Q9H0F5 515 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 SIK2Q9H0K1 926 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 RAB6CQ9H0N0 254 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 GDF3Q9NR23 364 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 TDP1Q9NUW8 608 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 MTRF1LQ9UGC7 380 aaKnown RBP11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 LSM7Q9UK45 103 aaKnown RBP11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 DNPEPQ9ULA0 475 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 ANAPC1Q9H1A4 1944 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 LRIG2O94898 1065 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 TBX18O95935 607 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 MBL2P11226 248 aaPredicted RBP11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 MLLT6P55198 1093 aaPredicted RBP11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 SLC7A9P82251 487 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 ZNF33AQ06730 810 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 PTK6Q13882 451 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 DPYSQ14117 519 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 PAFAH1B3Q15102 231 aaKnown RBP11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 OASLQ15646 514 aaKnown RBP11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 FAM78AQ5JUQ0 283 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 RABGAP1LQ5R372 815 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 HEATR6Q6AI08 1181 aaKnown RBP11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 ARID3BQ8IVW6 561 aaPredicted RBP11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 ALLCQ8N6M5 410 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 PQLC3Q8N755 202 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 TFB1MQ8WVM0 346 aaKnown RBP11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 IFT81Q8WYA0 676 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms