RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 PHF13Q86YI8 300 aaPredicted RBP22.94■■□□□ 1.26
BEST1-207ENST00000533521 APCDD1Q8J025 514 aa22.94■■□□□ 1.26
BEST1-207ENST00000533521 ZNF366Q8N895 744 aa22.94■■□□□ 1.26
BEST1-207ENST00000533521 FEM1AQ9BSK4 669 aa22.94■■□□□ 1.26
BEST1-207ENST00000533521 ZDHHC5Q9C0B5 715 aa22.94■■□□□ 1.26
BEST1-207ENST00000533521 SGK2Q9HBY8 427 aa22.94■■□□□ 1.26
BEST1-207ENST00000533521 RTN4Q9NQC3 1192 aaKnown RBP22.94■■□□□ 1.26
BEST1-207ENST00000533521 OR51B4Q9Y5P0 310 aa22.94■■□□□ 1.26
BEST1-207ENST00000533521 SYPP08247 313 aa22.93■■□□□ 1.26
BEST1-207ENST00000533521 ATP1A3P13637 1013 aa22.93■■□□□ 1.26
BEST1-207ENST00000533521 ENGP17813 658 aa22.93■■□□□ 1.26
BEST1-207ENST00000533521 PTP4A2Q12974 167 aa22.93■■□□□ 1.26
BEST1-207ENST00000533521 TRNP1Q6NT89 227 aa22.93■■□□□ 1.26
BEST1-207ENST00000533521 CAVIN1Q6NZI2 390 aaKnown RBP22.93■■□□□ 1.26
BEST1-207ENST00000533521 LRRC31Q6UY01 552 aa22.93■■□□□ 1.26
BEST1-207ENST00000533521 SETD3Q86TU7 594 aaPredicted RBP22.93■■□□□ 1.26
BEST1-207ENST00000533521 DHX40Q8IX18 779 aaKnown RBP22.93■■□□□ 1.26
BEST1-207ENST00000533521 DEFB119Q8N690 84 aa22.93■■□□□ 1.26
BEST1-207ENST00000533521 NYNRINQ9P2P1 1898 aaKnown RBP22.92■■□□□ 1.26
BEST1-207ENST00000533521 ASCC3Q8N3C0 2202 aaKnown RBP22.92■■□□□ 1.26
BEST1-207ENST00000533521 A0A1B0GTW7 788 aa22.92■■□□□ 1.26
BEST1-207ENST00000533521 GOLGA8SH3BPF8 625 aa22.92■■□□□ 1.26
BEST1-207ENST00000533521 I6L893 689 aaPredicted RBP22.92■■□□□ 1.26
BEST1-207ENST00000533521 SIN3BO75182 1162 aa22.92■■□□□ 1.26
BEST1-207ENST00000533521 CFIP05156 583 aa22.92■■□□□ 1.26
BEST1-207ENST00000533521 ADRB1P08588 477 aa22.92■■□□□ 1.26
BEST1-207ENST00000533521 PDGFRAP16234 1089 aa22.92■■□□□ 1.26
BEST1-207ENST00000533521 CSRP1P21291 193 aaKnown RBP22.92■■□□□ 1.26
BEST1-207ENST00000533521 MZF1P28698 734 aaPredicted RBP22.92■■□□□ 1.26
BEST1-207ENST00000533521 NSFP46459 744 aaKnown RBP22.92■■□□□ 1.26
BEST1-207ENST00000533521 ZNF165P49910 485 aa22.92■■□□□ 1.26
BEST1-207ENST00000533521 NRG1Q02297 640 aaPredicted RBP22.92■■□□□ 1.26
BEST1-207ENST00000533521 CLEC16AQ2KHT3 1053 aa22.92■■□□□ 1.26
BEST1-207ENST00000533521 KLHL40Q2TBA0 621 aa22.92■■□□□ 1.26
BEST1-207ENST00000533521 PPP1R2P3Q6NXS1 205 aa22.92■■□□□ 1.26
BEST1-207ENST00000533521 C14orf80Q86SX3 495 aa22.92■■□□□ 1.26
BEST1-207ENST00000533521 RGL4Q8IZJ4 473 aa22.92■■□□□ 1.26
BEST1-207ENST00000533521 FUCA2Q9BTY2 467 aa22.92■■□□□ 1.26
BEST1-207ENST00000533521 BTBD1Q9H0C5 482 aa22.92■■□□□ 1.26
BEST1-207ENST00000533521 SIK2Q9H0K1 926 aa22.92■■□□□ 1.26
BEST1-207ENST00000533521 PABPC3Q9H361 631 aaKnown RBP22.92■■□□□ 1.26
BEST1-207ENST00000533521 OSGEPQ9NPF4 335 aa22.92■■□□□ 1.26
BEST1-207ENST00000533521 ANLNQ9NQW6 1124 aa22.92■■□□□ 1.26
BEST1-207ENST00000533521 SLCO3A1Q9UIG8 710 aa22.92■■□□□ 1.26
BEST1-207ENST00000533521 NCKAP1Q9Y2A7 1128 aa22.92■■□□□ 1.26
BEST1-207ENST00000533521 ARHGAP33O14559 1287 aa22.91■■□□□ 1.26
BEST1-207ENST00000533521 ATP9BO43861 1147 aa22.91■■□□□ 1.26
BEST1-207ENST00000533521 CALB1P05937 261 aa22.91■■□□□ 1.26
BEST1-207ENST00000533521 FERP16591 822 aa22.91■■□□□ 1.26
BEST1-207ENST00000533521 CTSOP43234 321 aaPredicted RBP22.91■■□□□ 1.26
BEST1-207ENST00000533521 PTPN9P43378 593 aa22.91■■□□□ 1.26
BEST1-207ENST00000533521 ELAVL3Q14576 367 aaKnown RBP22.91■■□□□ 1.26
BEST1-207ENST00000533521 FILIP1LQ4L180 1135 aa22.91■■□□□ 1.26
BEST1-207ENST00000533521 C2CD6Q53TS8 623 aa22.91■■□□□ 1.26
BEST1-207ENST00000533521 STRADAQ7RTN6 431 aa22.91■■□□□ 1.26
BEST1-207ENST00000533521 CIR1Q86X95 450 aaPredicted RBP22.91■■□□□ 1.26
BEST1-207ENST00000533521 CENPIQ92674 756 aaPredicted RBP22.91■■□□□ 1.26
BEST1-207ENST00000533521 PTPRN2Q92932 1015 aa22.91■■□□□ 1.26
BEST1-207ENST00000533521 CFAP57Q96MR6 1250 aa22.91■■□□□ 1.26
BEST1-207ENST00000533521 PCDHB18PQ96TA0 734 aa22.91■■□□□ 1.26
BEST1-207ENST00000533521 ADAM22Q9P0K1 906 aa22.91■■□□□ 1.26
BEST1-207ENST00000533521 PPARGC1AQ9UBK2 798 aaKnown RBP22.91■■□□□ 1.26
BEST1-207ENST00000533521 ADAMTS1Q9UHI8 967 aa22.91■■□□□ 1.26
BEST1-207ENST00000533521 FZD4Q9ULV1 537 aa22.91■■□□□ 1.26
BEST1-207ENST00000533521 TPX2Q9ULW0 747 aaKnown RBP22.91■■□□□ 1.26
BEST1-207ENST00000533521 NUMA1Q14980 2115 aa22.91■■□□□ 1.26
BEST1-207ENST00000533521 ATXN2Q99700 1313 aaKnown RBP22.9■■□□□ 1.26
BEST1-207ENST00000533521 CXorf51AA0A1B0GTR3 108 aa22.9■■□□□ 1.26
BEST1-207ENST00000533521 A0A1W2PQC6 194 aa22.9■■□□□ 1.26
BEST1-207ENST00000533521 C2CD4BA6NLJ0 364 aa22.9■■□□□ 1.26
BEST1-207ENST00000533521 MEI4A8MW99 385 aa22.9■■□□□ 1.26
BEST1-207ENST00000533521 TTC34A8MYJ7 566 aa22.9■■□□□ 1.26
BEST1-207ENST00000533521 PTMSP20962 102 aa22.9■■□□□ 1.26
BEST1-207ENST00000533521 SDC4P31431 198 aa22.9■■□□□ 1.26
BEST1-207ENST00000533521 C1QBPQ07021 282 aaKnown RBP22.9■■□□□ 1.26
BEST1-207ENST00000533521 CST6Q15828 149 aa22.9■■□□□ 1.26
BEST1-207ENST00000533521 ARTNQ5T4W7 220 aa22.9■■□□□ 1.26
BEST1-207ENST00000533521 DCAF12L1Q5VU92 463 aa22.9■■□□□ 1.26
BEST1-207ENST00000533521 ZNF783Q6ZMS7 281 aa22.9■■□□□ 1.26
BEST1-207ENST00000533521 C3orf20Q8ND61 904 aa22.9■■□□□ 1.26
BEST1-207ENST00000533521 C1orf216Q8TAB5 229 aa22.9■■□□□ 1.26
BEST1-207ENST00000533521 SLC30A5Q8TAD4 765 aa22.9■■□□□ 1.26
BEST1-207ENST00000533521 FRS2Q8WU20 508 aa22.9■■□□□ 1.26
BEST1-207ENST00000533521 FAM129BQ96TA1 746 aa22.9■■□□□ 1.26
BEST1-207ENST00000533521 AGPAT1Q99943 283 aa22.9■■□□□ 1.26
BEST1-207ENST00000533521 METTL5Q9NRN9 209 aaKnown RBP22.9■■□□□ 1.26
BEST1-207ENST00000533521 DNAAF2Q9NVR5 837 aaKnown RBP22.9■■□□□ 1.26
BEST1-207ENST00000533521 KCNK5O95279 499 aa22.89■■□□□ 1.25
BEST1-207ENST00000533521 SEMA4FO95754 770 aa22.89■■□□□ 1.25
BEST1-207ENST00000533521 ADH1BP00325 375 aa22.89■■□□□ 1.25
BEST1-207ENST00000533521 KRT3P12035 628 aa22.89■■□□□ 1.25
BEST1-207ENST00000533521 CEACAM1P13688 526 aa22.89■■□□□ 1.25
BEST1-207ENST00000533521 ACSL1P33121 698 aa22.89■■□□□ 1.25
BEST1-207ENST00000533521 IRAK1P51617 712 aa22.89■■□□□ 1.25
BEST1-207ENST00000533521 SLC14A1Q13336 389 aa22.89■■□□□ 1.25
BEST1-207ENST00000533521 IQCB1Q15051 598 aa22.89■■□□□ 1.25
BEST1-207ENST00000533521 ARL13BQ3SXY8 428 aa22.89■■□□□ 1.25
BEST1-207ENST00000533521 OR52K2Q8NGK3 314 aa22.89■■□□□ 1.25
BEST1-207ENST00000533521 RXFP2Q8WXD0 754 aa22.89■■□□□ 1.25
BEST1-207ENST00000533521 VCPIP1Q96JH7 1222 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms