RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 ZNF528Q3MIS6 628 aa12.32□□□□□ -0.44
SSBP3-214ENST00000533209 BOLA3Q53S33 107 aa12.32□□□□□ -0.44
SSBP3-214ENST00000533209 PSTKQ8IV42 348 aaKnown RBP12.32□□□□□ -0.44
SSBP3-214ENST00000533209 ACRBPQ8NEB7 543 aa12.32□□□□□ -0.44
SSBP3-214ENST00000533209 NELL1Q92832 810 aa12.32□□□□□ -0.44
SSBP3-214ENST00000533209 MYO19Q96H55 970 aa12.32□□□□□ -0.44
SSBP3-214ENST00000533209 MRGPRX3Q96LB0 322 aa12.32□□□□□ -0.44
SSBP3-214ENST00000533209 HHIPQ96QV1 700 aa12.32□□□□□ -0.44
SSBP3-214ENST00000533209 EPAS1Q99814 870 aa12.32□□□□□ -0.44
SSBP3-214ENST00000533209 FEM1AQ9BSK4 669 aa12.32□□□□□ -0.44
SSBP3-214ENST00000533209 DHX35Q9H5Z1 703 aaKnown RBP12.32□□□□□ -0.44
SSBP3-214ENST00000533209 RETREG1Q9H6L5 497 aa12.32□□□□□ -0.44
SSBP3-214ENST00000533209 CD248Q9HCU0 757 aa12.32□□□□□ -0.44
SSBP3-214ENST00000533209 NDFIP2Q9NV92 336 aa12.32□□□□□ -0.44
SSBP3-214ENST00000533209 TMEM248Q9NWD8 314 aa12.32□□□□□ -0.44
SSBP3-214ENST00000533209 LCMT1Q9UIC8 334 aa12.32□□□□□ -0.44
SSBP3-214ENST00000533209 TFR2Q9UP52 801 aa12.32□□□□□ -0.44
SSBP3-214ENST00000533209 STON1Q9Y6Q2 735 aa12.32□□□□□ -0.44
SSBP3-214ENST00000533209 ATG2BQ96BY7 2078 aa12.32□□□□□ -0.44
SSBP3-214ENST00000533209 A0A1W2PQF6 199 aa12.31□□□□□ -0.44
SSBP3-214ENST00000533209 ILVBLA1L0T0 632 aa12.31□□□□□ -0.44
SSBP3-214ENST00000533209 TMEM110-MUSTN1A8MSY1 372 aa12.31□□□□□ -0.44
SSBP3-214ENST00000533209 MOCS3O95396 460 aa12.31□□□□□ -0.44
SSBP3-214ENST00000533209 ASLP04424 464 aa12.31□□□□□ -0.44
SSBP3-214ENST00000533209 ATP5BP06576 529 aaKnown RBP12.31□□□□□ -0.44
SSBP3-214ENST00000533209 RARAP10276 462 aa12.31□□□□□ -0.44
SSBP3-214ENST00000533209 HOXB2P14652 356 aa12.31□□□□□ -0.44
SSBP3-214ENST00000533209 PRKCHP24723 683 aa12.31□□□□□ -0.44
SSBP3-214ENST00000533209 EPHB2P29323 1055 aa12.31□□□□□ -0.44
SSBP3-214ENST00000533209 OR1E1P30953 314 aa12.31□□□□□ -0.44
SSBP3-214ENST00000533209 MAN1A1P33908 653 aa12.31□□□□□ -0.44
SSBP3-214ENST00000533209 HTR7P34969 479 aa12.31□□□□□ -0.44
SSBP3-214ENST00000533209 ARHGAP25P42331 645 aa12.31□□□□□ -0.44
SSBP3-214ENST00000533209 IL12RB1P42701 662 aa12.31□□□□□ -0.44
SSBP3-214ENST00000533209 MAPKAPK2P49137 400 aa12.31□□□□□ -0.44
SSBP3-214ENST00000533209 NUMBP49757 651 aa12.31□□□□□ -0.44
SSBP3-214ENST00000533209 DGKEP52429 567 aa12.31□□□□□ -0.44
SSBP3-214ENST00000533209 HADHBP55084 474 aaKnown RBP12.31□□□□□ -0.44
SSBP3-214ENST00000533209 TAS2R40P59535 323 aa12.31□□□□□ -0.44
SSBP3-214ENST00000533209 ECT2LQ008S8 904 aa12.31□□□□□ -0.44
SSBP3-214ENST00000533209 DMWDQ09019 674 aa12.31□□□□□ -0.44
SSBP3-214ENST00000533209 MESDQ14696 234 aa12.31□□□□□ -0.44
SSBP3-214ENST00000533209 E2F5Q15329 346 aa12.31□□□□□ -0.44
SSBP3-214ENST00000533209 SMTNL2Q2TAL5 461 aa12.31□□□□□ -0.44
SSBP3-214ENST00000533209 KCNT1Q5JUK3 1230 aa12.31□□□□□ -0.44
SSBP3-214ENST00000533209 C6orf118Q5T5N4 469 aa12.31□□□□□ -0.44
SSBP3-214ENST00000533209 RNF219Q5W0B1 726 aaPredicted RBP12.31□□□□□ -0.44
SSBP3-214ENST00000533209 SDE2Q6IQ49 451 aa12.31□□□□□ -0.44
SSBP3-214ENST00000533209 KIAA1211LQ6NV74 962 aa12.31□□□□□ -0.44
SSBP3-214ENST00000533209 CAMKK1Q8N5S9 505 aa12.31□□□□□ -0.44
SSBP3-214ENST00000533209 RTL3Q8N8U3 475 aaKnown RBP12.31□□□□□ -0.44
SSBP3-214ENST00000533209 TEKT4Q8WW24 435 aa12.31□□□□□ -0.44
SSBP3-214ENST00000533209 PSMB7Q99436 277 aa12.31□□□□□ -0.44
SSBP3-214ENST00000533209 TMEM245Q9H330 911 aa12.31□□□□□ -0.44
SSBP3-214ENST00000533209 ZWILCHQ9H900 591 aa12.31□□□□□ -0.44
SSBP3-214ENST00000533209 LUC7LQ9NQ29 371 aaKnown RBP12.31□□□□□ -0.44
SSBP3-214ENST00000533209 VPS28Q9UK41 221 aa12.31□□□□□ -0.44
SSBP3-214ENST00000533209 PLA2G4CQ9UP65 541 aa12.31□□□□□ -0.44
SSBP3-214ENST00000533209 ERVW-1Q9UQF0 538 aa12.31□□□□□ -0.44
SSBP3-214ENST00000533209 A0A0A6YYK5 440 aaPredicted RBP12.3□□□□□ -0.44
SSBP3-214ENST00000533209 A0A0D9SEW6 157 aa12.3□□□□□ -0.44
SSBP3-214ENST00000533209 WASH4PA8MWX3 477 aa12.3□□□□□ -0.44
SSBP3-214ENST00000533209 EEF2KO00418 725 aaKnown RBP12.3□□□□□ -0.44
SSBP3-214ENST00000533209 IPO7O95373 1038 aaKnown RBP12.3□□□□□ -0.44
SSBP3-214ENST00000533209 APBB3O95704 486 aa12.3□□□□□ -0.44
SSBP3-214ENST00000533209 HLA-EP13747 358 aa12.3□□□□□ -0.44
SSBP3-214ENST00000533209 PXNP49023 591 aaPredicted RBP12.3□□□□□ -0.44
SSBP3-214ENST00000533209 MRE11P49959 708 aa12.3□□□□□ -0.44
SSBP3-214ENST00000533209 TPI1P60174 286 aa12.3□□□□□ -0.44
SSBP3-214ENST00000533209 DPYSL2Q16555 572 aa12.3□□□□□ -0.44
SSBP3-214ENST00000533209 HADHQ16836 314 aaKnown RBP12.3□□□□□ -0.44
SSBP3-214ENST00000533209 FNDC3BQ53EP0 1204 aaKnown RBP12.3□□□□□ -0.44
SSBP3-214ENST00000533209 PPP6R3Q5H9R7 873 aaPredicted RBP12.3□□□□□ -0.44
SSBP3-214ENST00000533209 SERPINA13PQ6UXR4 307 aa12.3□□□□□ -0.44
SSBP3-214ENST00000533209 ZNF783Q6ZMS7 281 aa12.3□□□□□ -0.44
SSBP3-214ENST00000533209 TSTD1Q8NFU3 115 aa12.3□□□□□ -0.44
SSBP3-214ENST00000533209 OR7D4Q8NG98 312 aa12.3□□□□□ -0.44
SSBP3-214ENST00000533209 HSPH1Q92598 858 aa12.3□□□□□ -0.44
SSBP3-214ENST00000533209 ERLEC1Q96DZ1 483 aa12.3□□□□□ -0.44
SSBP3-214ENST00000533209 PPP1R9BQ96SB3 815 aa12.3□□□□□ -0.44
SSBP3-214ENST00000533209 FAM126AQ9BYI3 521 aaPredicted RBP12.3□□□□□ -0.44
SSBP3-214ENST00000533209 MUC3BQ9H195 1237 aa12.3□□□□□ -0.44
SSBP3-214ENST00000533209 EBF1Q9UH73 591 aa12.3□□□□□ -0.44
SSBP3-214ENST00000533209 DNAI1Q9UI46 699 aa12.3□□□□□ -0.44
SSBP3-214ENST00000533209 SALL4Q9UJQ4 1053 aa12.3□□□□□ -0.44
SSBP3-214ENST00000533209 ARIH1Q9Y4X5 557 aaPredicted RBP12.3□□□□□ -0.44
SSBP3-214ENST00000533209 RAD54BQ9Y620 910 aa12.3□□□□□ -0.44
SSBP3-214ENST00000533209 MYO18AQ92614 2054 aaKnown RBP12.3□□□□□ -0.44
SSBP3-214ENST00000533209 TCRBV21S2A2A0A5A6 115 aa12.29□□□□□ -0.44
SSBP3-214ENST00000533209 FGF10O15520 208 aaPredicted RBP12.29□□□□□ -0.44
SSBP3-214ENST00000533209 SNAP91O60641 907 aa12.29□□□□□ -0.44
SSBP3-214ENST00000533209 EPHX1P07099 455 aa12.29□□□□□ -0.44
SSBP3-214ENST00000533209 SRPRAP08240 638 aaKnown RBP12.29□□□□□ -0.44
SSBP3-214ENST00000533209 GOT1P17174 413 aa12.29□□□□□ -0.44
SSBP3-214ENST00000533209 SSR1P43307 286 aaKnown RBP12.29□□□□□ -0.44
SSBP3-214ENST00000533209 HCAR3P49019 387 aa12.29□□□□□ -0.44
SSBP3-214ENST00000533209 FNTBP49356 437 aa12.29□□□□□ -0.44
SSBP3-214ENST00000533209 STK19P49842 368 aaPredicted RBP12.29□□□□□ -0.44
SSBP3-214ENST00000533209 ARSEP51690 589 aa12.29□□□□□ -0.44
SSBP3-214ENST00000533209 VAV2P52735 878 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms