RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 MSANTD2Q6P1R3 559 aa13.47□□□□□ -0.25
COPB1-209ENST00000533096 TMEM270Q6UE05 265 aa13.47□□□□□ -0.25
COPB1-209ENST00000533096 LCLAT1Q6UWP7 414 aa13.47□□□□□ -0.25
COPB1-209ENST00000533096 SLC25A45Q8N413 288 aa13.47□□□□□ -0.25
COPB1-209ENST00000533096 GUF1Q8N442 669 aaKnown RBP13.47□□□□□ -0.25
COPB1-209ENST00000533096 LSM14AQ8ND56 463 aaKnown RBP13.47□□□□□ -0.25
COPB1-209ENST00000533096 SLC35F5Q8WV83 523 aa13.47□□□□□ -0.25
COPB1-209ENST00000533096 AZIN2Q96A70 460 aa13.47□□□□□ -0.25
COPB1-209ENST00000533096 FAM149B1Q96BN6 582 aa13.47□□□□□ -0.25
COPB1-209ENST00000533096 KLHDC7BQ96G42 594 aa13.47□□□□□ -0.25
COPB1-209ENST00000533096 FCRL2Q96LA5 508 aaPredicted RBP13.47□□□□□ -0.25
COPB1-209ENST00000533096 ABCG4Q9H172 646 aa13.47□□□□□ -0.25
COPB1-209ENST00000533096 CAAP1Q9H8G2 361 aa13.47□□□□□ -0.25
COPB1-209ENST00000533096 ARHGAP20Q9P2F6 1191 aa13.47□□□□□ -0.25
COPB1-209ENST00000533096 GCN1Q92616 2671 aaKnown RBP13.46□□□□□ -0.25
COPB1-209ENST00000533096 M0QYV0 167 aa13.46□□□□□ -0.25
COPB1-209ENST00000533096 RNF225M0QZC1 329 aaPredicted RBP13.46□□□□□ -0.25
COPB1-209ENST00000533096 MAGEC1O60732 1142 aa13.46□□□□□ -0.25
COPB1-209ENST00000533096 MYL1P05976 194 aa13.46□□□□□ -0.25
COPB1-209ENST00000533096 PDGFRAP16234 1089 aa13.46□□□□□ -0.25
COPB1-209ENST00000533096 BRD2P25440 801 aaKnown RBP13.46□□□□□ -0.25
COPB1-209ENST00000533096 MZF1P28698 734 aaPredicted RBP13.46□□□□□ -0.25
COPB1-209ENST00000533096 ENPEPQ07075 957 aa13.46□□□□□ -0.25
COPB1-209ENST00000533096 DPYDQ12882 1025 aa13.46□□□□□ -0.25
COPB1-209ENST00000533096 TBC1D25Q3MII6 688 aa13.46□□□□□ -0.25
COPB1-209ENST00000533096 ZNF542PQ5EBM4 170 aa13.46□□□□□ -0.25
COPB1-209ENST00000533096 BROXQ5VW32 411 aa13.46□□□□□ -0.25
COPB1-209ENST00000533096 ATL3Q6DD88 541 aa13.46□□□□□ -0.25
COPB1-209ENST00000533096 PCSK4Q6UW60 755 aa13.46□□□□□ -0.25
COPB1-209ENST00000533096 CHSY1Q86X52 802 aa13.46□□□□□ -0.25
COPB1-209ENST00000533096 OXR1Q8N573 874 aa13.46□□□□□ -0.25
COPB1-209ENST00000533096 DQX1Q8TE96 717 aaKnown RBP13.46□□□□□ -0.25
COPB1-209ENST00000533096 IRGQQ8WZA9 623 aa13.46□□□□□ -0.25
COPB1-209ENST00000533096 SPATA32Q96LK8 384 aa13.46□□□□□ -0.25
COPB1-209ENST00000533096 UCKL1Q9NWZ5 548 aa13.46□□□□□ -0.25
COPB1-209ENST00000533096 TJP2Q9UDY2 1190 aa13.46□□□□□ -0.25
COPB1-209ENST00000533096 CYTH4Q9UIA0 394 aa13.46□□□□□ -0.25
COPB1-209ENST00000533096 SARDHQ9UL12 918 aa13.46□□□□□ -0.25
COPB1-209ENST00000533096 PTPRBP23467 1997 aa13.45□□□□□ -0.26
COPB1-209ENST00000533096 SYNJ2BP-COX16A0A087WUM0 186 aa13.45□□□□□ -0.26
COPB1-209ENST00000533096 KLK10O43240 276 aa13.45□□□□□ -0.26
COPB1-209ENST00000533096 USP12O75317 370 aa13.45□□□□□ -0.26
COPB1-209ENST00000533096 FYNP06241 537 aa13.45□□□□□ -0.26
COPB1-209ENST00000533096 PRLRP16471 622 aa13.45□□□□□ -0.26
COPB1-209ENST00000533096 TACR2P21452 398 aa13.45□□□□□ -0.26
COPB1-209ENST00000533096 ACP1P24666 158 aa13.45□□□□□ -0.26
COPB1-209ENST00000533096 CNTN1Q12860 1018 aa13.45□□□□□ -0.26
COPB1-209ENST00000533096 ZNF211Q13398 564 aaPredicted RBP13.45□□□□□ -0.26
COPB1-209ENST00000533096 LY6DQ14210 128 aa13.45□□□□□ -0.26
COPB1-209ENST00000533096 ARID5BQ14865 1188 aa13.45□□□□□ -0.26
COPB1-209ENST00000533096 CNGA2Q16280 664 aa13.45□□□□□ -0.26
COPB1-209ENST00000533096 PROX2Q3B8N5 592 aa13.45□□□□□ -0.26
COPB1-209ENST00000533096 PKDCCQ504Y2 493 aa13.45□□□□□ -0.26
COPB1-209ENST00000533096 SFMBT2Q5VUG0 894 aa13.45□□□□□ -0.26
COPB1-209ENST00000533096 SYPL2Q5VXT5 272 aa13.45□□□□□ -0.26
COPB1-209ENST00000533096 KANSL1Q7Z3B3 1105 aa13.45□□□□□ -0.26
COPB1-209ENST00000533096 ERICH1Q86X53 443 aa13.45□□□□□ -0.26
COPB1-209ENST00000533096 CIR1Q86X95 450 aaPredicted RBP13.45□□□□□ -0.26
COPB1-209ENST00000533096 DCBLD1Q8N8Z6 715 aa13.45□□□□□ -0.26
COPB1-209ENST00000533096 KDM1BQ8NB78 822 aa13.45□□□□□ -0.26
COPB1-209ENST00000533096 ZNF248Q8NDW4 579 aa13.45□□□□□ -0.26
COPB1-209ENST00000533096 ZSWIM1Q9BR11 485 aa13.45□□□□□ -0.26
COPB1-209ENST00000533096 IRX2Q9BZI1 471 aaPredicted RBP13.45□□□□□ -0.26
COPB1-209ENST00000533096 COX16Q9P0S2 106 aa13.45□□□□□ -0.26
COPB1-209ENST00000533096 TLR6Q9Y2C9 796 aa13.45□□□□□ -0.26
COPB1-209ENST00000533096 CELSR3Q9NYQ7 3312 aa13.45□□□□□ -0.26
COPB1-209ENST00000533096 PRAMEF26H0Y7S4 382 aa13.44□□□□□ -0.26
COPB1-209ENST00000533096 LATO43561 262 aa13.44□□□□□ -0.26
COPB1-209ENST00000533096 OPA1O60313 960 aa13.44□□□□□ -0.26
COPB1-209ENST00000533096 APOEP02649 317 aa13.44□□□□□ -0.26
COPB1-209ENST00000533096 THEGLP0DJG4 465 aa13.44□□□□□ -0.26
COPB1-209ENST00000533096 DRD3P35462 400 aa13.44□□□□□ -0.26
COPB1-209ENST00000533096 GABREP78334 506 aa13.44□□□□□ -0.26
COPB1-209ENST00000533096 ELAVL3Q14576 367 aaKnown RBP13.44□□□□□ -0.26
COPB1-209ENST00000533096 ZCWPW2Q504Y3 356 aa13.44□□□□□ -0.26
COPB1-209ENST00000533096 FAM46CQ5VWP2 391 aa13.44□□□□□ -0.26
COPB1-209ENST00000533096 KRBA2Q6ZNG9 492 aa13.44□□□□□ -0.26
COPB1-209ENST00000533096 RRAGAQ7L523 313 aa13.44□□□□□ -0.26
COPB1-209ENST00000533096 DSG4Q86SJ6 1040 aa13.44□□□□□ -0.26
COPB1-209ENST00000533096 SCML4Q8N228 414 aa13.44□□□□□ -0.26
COPB1-209ENST00000533096 PPM1KQ8N3J5 372 aa13.44□□□□□ -0.26
COPB1-209ENST00000533096 OR8D1Q8WZ84 308 aa13.44□□□□□ -0.26
COPB1-209ENST00000533096 KAT5Q92993 513 aa13.44□□□□□ -0.26
COPB1-209ENST00000533096 RNF34Q969K3 372 aa13.44□□□□□ -0.26
COPB1-209ENST00000533096 SERPINB11Q96P15 392 aa13.44□□□□□ -0.26
COPB1-209ENST00000533096 CALN1Q9BXU9 219 aa13.44□□□□□ -0.26
COPB1-209ENST00000533096 SLC12A6Q9UHW9 1150 aa13.44□□□□□ -0.26
COPB1-209ENST00000533096 HPSEQ9Y251 543 aa13.44□□□□□ -0.26
COPB1-209ENST00000533096 ACACAQ13085 2346 aa13.44□□□□□ -0.26
COPB1-209ENST00000533096 GOLGA4Q13439 2230 aaKnown RBP13.43□□□□□ -0.26
COPB1-209ENST00000533096 CYSRT1A8MQ03 144 aa13.43□□□□□ -0.26
COPB1-209ENST00000533096 LOC400499M0QZD8 3231 aa13.43□□□□□ -0.26
COPB1-209ENST00000533096 RNGTTO60942 597 aaKnown RBP13.43□□□□□ -0.26
COPB1-209ENST00000533096 FBXO21O94952 628 aa13.43□□□□□ -0.26
COPB1-209ENST00000533096 CENPBP07199 599 aaPredicted RBP13.43□□□□□ -0.26
COPB1-209ENST00000533096 PAEPP09466 180 aa13.43□□□□□ -0.26
COPB1-209ENST00000533096 DGKAP23743 735 aa13.43□□□□□ -0.26
COPB1-209ENST00000533096 PRCPP42785 496 aa13.43□□□□□ -0.26
COPB1-209ENST00000533096 DLG2Q15700 870 aa13.43□□□□□ -0.26
COPB1-209ENST00000533096 EDRF1Q3B7T1 1238 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms