RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 TTC17Q96AE7 1141 aa13.35□□□□□ -0.27
TRAPPC4-212ENST00000533058 RMDN1Q96DB5 314 aa13.35□□□□□ -0.27
TRAPPC4-212ENST00000533058 CNPY3Q9BT09 278 aa13.35□□□□□ -0.27
TRAPPC4-212ENST00000533058 WDCPQ9H6R7 721 aa13.35□□□□□ -0.27
TRAPPC4-212ENST00000533058 PIGVQ9NUD9 493 aa13.35□□□□□ -0.27
TRAPPC4-212ENST00000533058 CALCOCO1Q9P1Z2 691 aa13.35□□□□□ -0.27
TRAPPC4-212ENST00000533058 XPO7Q9UIA9 1087 aaKnown RBP13.35□□□□□ -0.27
TRAPPC4-212ENST00000533058 ANAPC7Q9UJX3 599 aa13.35□□□□□ -0.27
TRAPPC4-212ENST00000533058 INTUQ9ULD6 942 aa13.35□□□□□ -0.27
TRAPPC4-212ENST00000533058 CEP250Q9BV73 2442 aa13.35□□□□□ -0.27
TRAPPC4-212ENST00000533058 SPAG17Q6Q759 2223 aa13.35□□□□□ -0.27
TRAPPC4-212ENST00000533058 EML5Q05BV3 1969 aa13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 SDK1Q7Z5N4 2213 aa13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 TMEM191CA6NGB0 347 aa13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 TMEM110-MUSTN1A8MSY1 372 aa13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 F5H5T6 163 aa13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 MYO1FO00160 1098 aa13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 SYNCRIPO60506 623 aaKnown RBP13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 RNF8O76064 485 aa13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 LUC7L3O95232 432 aaKnown RBP13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 ASLP04424 464 aa13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 MPLP40238 635 aa13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 SSR1P43307 286 aaKnown RBP13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 NOP2P46087 812 aaKnown RBP13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 CXCR3P49682 368 aa13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 ATXN1P54253 815 aaKnown RBP13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 CAMK2GQ13555 558 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 SLC12A1Q13621 1099 aa13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 PTPRNQ16849 979 aa13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 BRMS1LQ5PSV4 323 aa13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 SH3PXD2AQ5TCZ1 1133 aa13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 RAP1GAP2Q684P5 730 aa13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 SERPINA13PQ6UXR4 307 aa13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 LPCAT2Q7L5N7 544 aa13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 ERMP1Q7Z2K6 904 aa13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 BNIPLQ7Z465 357 aa13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 CHSY1Q86X52 802 aa13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 TMEM139Q8IV31 216 aa13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 LGI2Q8N0V4 545 aa13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 TXLNBQ8N3L3 684 aa13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 WFDC5Q8TCV5 224 aa13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 NETO1Q8TDF5 533 aa13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 RLN3Q8WXF3 142 aa13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 MYEOVQ96EZ4 313 aa13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 DESI2Q9BSY9 194 aa13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 TRIM7Q9C029 511 aa13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 TKTL2Q9H0I9 626 aa13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 FBRSQ9HAH7 460 aa13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 ARHGEF38Q9NXL2 777 aa13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 KIAA1522Q9P206 1035 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 UVRAGQ9P2Y5 699 aa13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 IP6K2Q9UHH9 426 aa13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 MBD1Q9UIS9 605 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 INVSQ9Y283 1065 aa13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 RAD54BQ9Y620 910 aa13.34□□□□□ -0.27
TRAPPC4-212ENST00000533058 IGHV1OR15-9A0A0B4J2B8 117 aa13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 ARHGAP6O43182 974 aa13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 MAP3K13O43283 966 aa13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 LCA5LO95447 670 aa13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 IGLV3-19P01714 112 aa13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 EPHX1P07099 455 aa13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 POLR2EP19388 210 aaKnown RBP13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 CD70P32970 193 aa13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 HOXD12P35452 270 aa13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 PLK1P53350 603 aa13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 LIMK1P53667 647 aa13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 NAP1L1P55209 391 aaKnown RBP13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 OXCT1P55809 520 aa13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 FOXK2Q01167 660 aa13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 OGDHQ02218 1023 aa13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 LMAN2Q12907 356 aa13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 CDH18Q13634 790 aa13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 RSPO4Q2I0M5 234 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 ARL13BQ3SXY8 428 aa13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 RABGAP1LQ5R372 815 aa13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 OTUD1Q5VV17 481 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 PEAR1Q5VY43 1037 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 STRADAQ7RTN6 431 aa13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 TMPRSS6Q8IU80 811 aa13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 RHOT2Q8IXI1 618 aa13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 SLC35G2Q8TBE7 412 aa13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 SORCS1Q8WY21 1168 aa13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 RFFLQ8WZ73 363 aa13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 BTBD6Q96KE9 485 aa13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 C1orf74Q96LT6 269 aa13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 RTKNQ9BST9 563 aa13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 ADAM33Q9BZ11 813 aa13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 MKRN2Q9H000 416 aaKnown RBP13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 SIK2Q9H0K1 926 aa13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 PRDM16Q9HAZ2 1276 aa13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 ITM2CQ9NQX7 267 aa13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 STIM2Q9P246 746 aa13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 USP36Q9P275 1121 aaKnown RBP13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 SUN2Q9UH99 717 aa13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 INTS6Q9UL03 887 aaKnown RBP13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.33□□□□□ -0.28
TRAPPC4-212ENST00000533058 A0A1B0GVM2 712 aa13.32□□□□□ -0.28
TRAPPC4-212ENST00000533058 TCAF2A6NFQ2 919 aa13.32□□□□□ -0.28
TRAPPC4-212ENST00000533058 H0Y626 953 aa13.32□□□□□ -0.28
TRAPPC4-212ENST00000533058 ENDOD1O94919 500 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms