RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 AADACL2Q6P093 401 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 CYP4V2Q6ZWL3 525 aaPredicted RBP6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 TMC7Q7Z402 723 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 ADGRG6Q86SQ4 1221 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 C14orf80Q86SX3 495 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 TNS4Q8IZW8 715 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 PDCD6IPQ8WUM4 868 aaKnown RBP6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 SCYL1Q96KG9 808 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 NT5C1BQ96P26 610 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 IRF2BPLQ9H1B7 796 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 IPPQ9Y573 584 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 KANSL1LA0AUZ9 987 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 CENPBD1B2RD01 187 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 HNRNPCL2B2RXH8 293 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 GNGT2O14610 69 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 TGDSO95455 350 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 SERPINA6P08185 405 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 SPATA31D3P0C874 917 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 SMIM10L2AP0DMW4 78 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 SMIM10L2BP0DMW5 78 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 ATF4P18848 351 aaPredicted RBP6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 CLK1P49759 484 aaKnown RBP6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 BNIP3Q12983 259 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 BSPRYQ5W0U4 402 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 GJB7Q6PEY0 223 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 SPATA31D4Q6ZUB0 917 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 MICU2Q8IYU8 434 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 C7orf61Q8IZ16 206 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 ELMOD2Q8IZ81 293 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 FAM47BQ8NA70 645 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 PCSK9Q8NBP7 692 aaKnown RBP6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 ETNPPLQ8TBG4 499 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 LRRC39Q96DD0 335 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 APOPT1Q96IL0 206 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 CDRT15Q96T59 188 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 TLE6Q9H808 572 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 EFCAB1Q9HAE3 211 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 CHORDC1Q9UHD1 332 aaPredicted RBP6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 CDY2AQ9Y6F7 541 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 CDY1Q9Y6F8 540 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 B4GALT5O43286 388 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 CRYZL1O95825 349 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 TGFB3P10600 412 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 ZNF23P17027 643 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 PRKCIP41743 596 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 NPTX2P47972 431 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 INPP1P49441 399 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 EIF3EP60228 445 aaKnown RBP6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 PRPSAP1Q14558 356 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 DGUOKQ16854 277 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 ASTE1Q2TB18 679 aaPredicted RBP6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 TTC39BQ5VTQ0 682 aaPredicted RBP6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 DUS1LQ6P1R4 473 aaKnown RBP6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 CCDC28AQ8IWP9 274 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 EFCAB3Q8N7B9 438 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 RNF148Q8N7C7 305 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 PDPRQ8NCN5 879 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 TOR1AIP2Q8NFQ8 470 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 AGR3Q8TD06 166 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 SLC5A5Q92911 643 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 TNFRSF25Q93038 417 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 MTMR9Q96QG7 549 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 ACCSQ96QU6 501 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 GPR20Q99678 358 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 CBWD1Q9BRT8 395 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 HIPK3Q9H422 1215 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 DIABLOQ9NR28 239 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 ABCB10Q9NRK6 738 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 FKBP14Q9NWM8 211 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 ADAMTSL1Q8N6G6 1762 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 TUBGCP6Q96RT7 1819 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 IGLV3-22A0A075B6J6 115 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 NEMP1O14524 444 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 MAGEB2O15479 319 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 SEPT4O43236 478 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 TPST1O60507 370 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 MTRF1O75570 445 aaKnown RBP6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 POMCP01189 267 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 CYP1A1P04798 512 aaPredicted RBP6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 T-ENOLP0DO92 83 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 RALAP11233 206 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 GAP43P17677 238 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 CDH2P19022 906 aaPredicted RBP6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 NR4A1P22736 598 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 DNAJB2P25686 324 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 CTGFP29279 349 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 CYP2C18P33260 490 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 NAMPTP43490 491 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 NUMBP49757 651 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 FXR2P51116 673 aaKnown RBP eCLIP6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 GNA12Q03113 381 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 EIF2B5Q13144 721 aaKnown RBP6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 ORC1Q13415 861 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 MOGSQ13724 837 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 GRB14Q14449 540 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 MAPRE2Q15555 327 aa6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 MAPRE1Q15691 268 aaKnown RBP6.92□□□□□ -1.3
TGFBR3-209ENST00000532540 PUS10Q3MIT2 529 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms