RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 ARMCX6Q7L4S7 300 aa23.65■■□□□ 1.38
CAPN1-222ENST00000532285 MCOLN2Q8IZK6 566 aa23.65■■□□□ 1.38
CAPN1-222ENST00000532285 NETO1Q8TDF5 533 aa23.65■■□□□ 1.38
CAPN1-222ENST00000532285 PIGKQ92643 395 aa23.65■■□□□ 1.38
CAPN1-222ENST00000532285 CENPIQ92674 756 aaPredicted RBP23.65■■□□□ 1.38
CAPN1-222ENST00000532285 VCPIP1Q96JH7 1222 aa23.65■■□□□ 1.38
CAPN1-222ENST00000532285 SMOC1Q9H4F8 434 aa23.65■■□□□ 1.38
CAPN1-222ENST00000532285 HAUS4Q9H6D7 363 aa23.65■■□□□ 1.38
CAPN1-222ENST00000532285 CD93Q9NPY3 652 aa23.65■■□□□ 1.38
CAPN1-222ENST00000532285 DLL3Q9NYJ7 618 aa23.65■■□□□ 1.38
CAPN1-222ENST00000532285 SNX10Q9Y5X0 201 aa23.65■■□□□ 1.38
CAPN1-222ENST00000532285 GON4LQ3T8J9 2241 aa23.65■■□□□ 1.38
CAPN1-222ENST00000532285 ITIH6Q6UXX5 1313 aa23.64■■□□□ 1.38
CAPN1-222ENST00000532285 IGLV3-10A0A075B6K4 115 aa23.64■■□□□ 1.37
CAPN1-222ENST00000532285 TCRBV5S1A1TA0A578 114 aa23.64■■□□□ 1.37
CAPN1-222ENST00000532285 ANKRD62A6NC57 917 aa23.64■■□□□ 1.37
CAPN1-222ENST00000532285 E9PAM4 449 aa23.64■■□□□ 1.37
CAPN1-222ENST00000532285 CNTN5O94779 1100 aa23.64■■□□□ 1.37
CAPN1-222ENST00000532285 IGLV3-19P01714 112 aa23.64■■□□□ 1.37
CAPN1-222ENST00000532285 GPD1P21695 349 aa23.64■■□□□ 1.37
CAPN1-222ENST00000532285 NNMTP40261 264 aa23.64■■□□□ 1.37
CAPN1-222ENST00000532285 PBX1P40424 430 aa23.64■■□□□ 1.37
CAPN1-222ENST00000532285 ARL13BQ3SXY8 428 aa23.64■■□□□ 1.37
CAPN1-222ENST00000532285 SH3PXD2AQ5TCZ1 1133 aa23.64■■□□□ 1.37
CAPN1-222ENST00000532285 SYT12Q8IV01 421 aa23.64■■□□□ 1.37
CAPN1-222ENST00000532285 FEM1AQ9BSK4 669 aa23.64■■□□□ 1.37
CAPN1-222ENST00000532285 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.63■■□□□ 1.37
CAPN1-222ENST00000532285 A0A1W2PQJ5 194 aa23.63■■□□□ 1.37
CAPN1-222ENST00000532285 TARSL2A2RTX5 802 aaKnown RBP23.63■■□□□ 1.37
CAPN1-222ENST00000532285 SRGAP2O75044 1071 aa23.63■■□□□ 1.37
CAPN1-222ENST00000532285 ADRA1BP35368 520 aa23.63■■□□□ 1.37
CAPN1-222ENST00000532285 ZBTB16Q05516 673 aa23.63■■□□□ 1.37
CAPN1-222ENST00000532285 ZNF33AQ06730 810 aa23.63■■□□□ 1.37
CAPN1-222ENST00000532285 KLHL30Q0D2K2 578 aa23.63■■□□□ 1.37
CAPN1-222ENST00000532285 ALFQ53S48 1182 aa23.63■■□□□ 1.37
CAPN1-222ENST00000532285 ZNF571Q7Z3V5 609 aaPredicted RBP23.63■■□□□ 1.37
CAPN1-222ENST00000532285 DEFB119Q8N690 84 aa23.63■■□□□ 1.37
CAPN1-222ENST00000532285 FAM172AQ8WUF8 416 aa23.63■■□□□ 1.37
CAPN1-222ENST00000532285 IQCDQ96DY2 449 aa23.63■■□□□ 1.37
CAPN1-222ENST00000532285 ALG14Q96F25 216 aa23.63■■□□□ 1.37
CAPN1-222ENST00000532285 TOE1Q96GM8 510 aaKnown RBP23.63■■□□□ 1.37
CAPN1-222ENST00000532285 ZNF419Q96HQ0 510 aaPredicted RBP23.63■■□□□ 1.37
CAPN1-222ENST00000532285 RPL10LQ96L21 214 aaKnown RBP23.63■■□□□ 1.37
CAPN1-222ENST00000532285 WSB2Q9NYS7 404 aaPredicted RBP23.63■■□□□ 1.37
CAPN1-222ENST00000532285 TAS2R14Q9NYV8 317 aa23.63■■□□□ 1.37
CAPN1-222ENST00000532285 SLCO3A1Q9UIG8 710 aa23.63■■□□□ 1.37
CAPN1-222ENST00000532285 EDDM13A0A1B0GTR0 161 aa23.62■■□□□ 1.37
CAPN1-222ENST00000532285 TTC34A8MYJ7 566 aa23.62■■□□□ 1.37
CAPN1-222ENST00000532285 KHNYNO15037 678 aaKnown RBP23.62■■□□□ 1.37
CAPN1-222ENST00000532285 GDF9O60383 454 aa23.62■■□□□ 1.37
CAPN1-222ENST00000532285 HOXD12P35452 270 aa23.62■■□□□ 1.37
CAPN1-222ENST00000532285 VASPP50552 380 aaPredicted RBP23.62■■□□□ 1.37
CAPN1-222ENST00000532285 RPS14P62263 151 aaKnown RBP23.62■■□□□ 1.37
CAPN1-222ENST00000532285 RAB6CQ53S08 254 aa23.62■■□□□ 1.37
CAPN1-222ENST00000532285 E4F1Q66K89 784 aaPredicted RBP23.62■■□□□ 1.37
CAPN1-222ENST00000532285 SETD3Q86TU7 594 aaPredicted RBP23.62■■□□□ 1.37
CAPN1-222ENST00000532285 CACUL1Q86Y37 369 aa23.62■■□□□ 1.37
CAPN1-222ENST00000532285 OR52K2Q8NGK3 314 aa23.62■■□□□ 1.37
CAPN1-222ENST00000532285 FOXJ1Q92949 421 aa23.62■■□□□ 1.37
CAPN1-222ENST00000532285 RAB6CQ9H0N0 254 aa23.62■■□□□ 1.37
CAPN1-222ENST00000532285 MUC3BQ9H195 1237 aa23.62■■□□□ 1.37
CAPN1-222ENST00000532285 RSPH9Q9H1X1 276 aaPredicted RBP23.62■■□□□ 1.37
CAPN1-222ENST00000532285 MTG2Q9H4K7 406 aa23.62■■□□□ 1.37
CAPN1-222ENST00000532285 MPP6Q9NZW5 540 aa23.62■■□□□ 1.37
CAPN1-222ENST00000532285 IFNKQ9P0W0 207 aa23.62■■□□□ 1.37
CAPN1-222ENST00000532285 VPS28Q9UK41 221 aa23.62■■□□□ 1.37
CAPN1-222ENST00000532285 PILRBQ9UKJ0 227 aa23.62■■□□□ 1.37
CAPN1-222ENST00000532285 OR51B4Q9Y5P0 310 aa23.62■■□□□ 1.37
CAPN1-222ENST00000532285 TMCO5BA8MYB1 307 aa23.61■■□□□ 1.37
CAPN1-222ENST00000532285 RNASEH1O60930 286 aaKnown RBP23.61■■□□□ 1.37
CAPN1-222ENST00000532285 SIN3BO75182 1162 aa23.61■■□□□ 1.37
CAPN1-222ENST00000532285 GZMAP12544 262 aa23.61■■□□□ 1.37
CAPN1-222ENST00000532285 ITPKAP23677 461 aa23.61■■□□□ 1.37
CAPN1-222ENST00000532285 RRM1P23921 792 aa23.61■■□□□ 1.37
CAPN1-222ENST00000532285 STK19P49842 368 aaPredicted RBP23.61■■□□□ 1.37
CAPN1-222ENST00000532285 ZNF143P52747 638 aaPredicted RBP23.61■■□□□ 1.37
CAPN1-222ENST00000532285 HDAC4P56524 1084 aa23.61■■□□□ 1.37
CAPN1-222ENST00000532285 NRG1Q02297 640 aaPredicted RBP23.61■■□□□ 1.37
CAPN1-222ENST00000532285 PPP1R15BQ5SWA1 713 aa23.61■■□□□ 1.37
CAPN1-222ENST00000532285 C9orf64Q5T6V5 341 aa23.61■■□□□ 1.37
CAPN1-222ENST00000532285 ZNF776Q68DI1 518 aaPredicted RBP23.61■■□□□ 1.37
CAPN1-222ENST00000532285 DCUN1D2Q6PH85 259 aa23.61■■□□□ 1.37
CAPN1-222ENST00000532285 SLC41A1Q8IVJ1 513 aa23.61■■□□□ 1.37
CAPN1-222ENST00000532285 SYN2Q92777 582 aaPredicted RBP23.61■■□□□ 1.37
CAPN1-222ENST00000532285 HSPA12BQ96MM6 686 aa23.61■■□□□ 1.37
CAPN1-222ENST00000532285 MCEEQ96PE7 176 aa23.61■■□□□ 1.37
CAPN1-222ENST00000532285 RTKNQ9BST9 563 aa23.61■■□□□ 1.37
CAPN1-222ENST00000532285 OSBPL2Q9H1P3 480 aa23.61■■□□□ 1.37
CAPN1-222ENST00000532285 TMEM74BQ9NUR3 256 aa23.61■■□□□ 1.37
CAPN1-222ENST00000532285 PPARGC1AQ9UBK2 798 aaKnown RBP23.61■■□□□ 1.37
CAPN1-222ENST00000532285 OR12D3Q9UGF7 316 aa23.61■■□□□ 1.37
CAPN1-222ENST00000532285 SLC25A13Q9UJS0 675 aa23.61■■□□□ 1.37
CAPN1-222ENST00000532285 DNTTP04053 509 aa23.6■■□□□ 1.37
CAPN1-222ENST00000532285 TPM3P06753 285 aa23.6■■□□□ 1.37
CAPN1-222ENST00000532285 RHOCP08134 193 aa23.6■■□□□ 1.37
CAPN1-222ENST00000532285 SKILP12757 684 aa23.6■■□□□ 1.37
CAPN1-222ENST00000532285 OR1E1P30953 314 aa23.6■■□□□ 1.37
CAPN1-222ENST00000532285 NUMBP49757 651 aa23.6■■□□□ 1.37
CAPN1-222ENST00000532285 LIMK1P53667 647 aa23.6■■□□□ 1.37
CAPN1-222ENST00000532285 RPL7AP62424 266 aaKnown RBP23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms