RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 HPS4Q9NQG7 708 aa12.88□□□□□ -0.35
COPB1-208ENST00000532088 TMEM248Q9NWD8 314 aa12.88□□□□□ -0.35
COPB1-208ENST00000532088 GPATCH2LQ9NWQ4 482 aa12.88□□□□□ -0.35
COPB1-208ENST00000532088 CWC15Q9P013 229 aaKnown RBP12.88□□□□□ -0.35
COPB1-208ENST00000532088 STIM2Q9P246 746 aa12.88□□□□□ -0.35
COPB1-208ENST00000532088 VANGL2Q9ULK5 521 aa12.88□□□□□ -0.35
COPB1-208ENST00000532088 TTC24A2A3L6 582 aaPredicted RBP12.87□□□□□ -0.35
COPB1-208ENST00000532088 LRRD1A4D1F6 860 aa12.87□□□□□ -0.35
COPB1-208ENST00000532088 FAM72CH0Y354 149 aa12.87□□□□□ -0.35
COPB1-208ENST00000532088 CACNG3O60359 315 aa12.87□□□□□ -0.35
COPB1-208ENST00000532088 ADH5P11766 374 aa12.87□□□□□ -0.35
COPB1-208ENST00000532088 SRFP11831 508 aa12.87□□□□□ -0.35
COPB1-208ENST00000532088 ZFXP17010 805 aaPredicted RBP12.87□□□□□ -0.35
COPB1-208ENST00000532088 IL4RP24394 825 aa12.87□□□□□ -0.35
COPB1-208ENST00000532088 HOXD9P28356 352 aaPredicted RBP12.87□□□□□ -0.35
COPB1-208ENST00000532088 EPHB2P29323 1055 aa12.87□□□□□ -0.35
COPB1-208ENST00000532088 EIF2DP41214 584 aaKnown RBP12.87□□□□□ -0.35
COPB1-208ENST00000532088 MARCKSL1P49006 195 aa12.87□□□□□ -0.35
COPB1-208ENST00000532088 MAPKAPK2P49137 400 aa12.87□□□□□ -0.35
COPB1-208ENST00000532088 GRM2Q14416 872 aa12.87□□□□□ -0.35
COPB1-208ENST00000532088 ITPRIPL2Q3MIP1 535 aa12.87□□□□□ -0.35
COPB1-208ENST00000532088 PREPLQ4J6C6 727 aaPredicted RBP12.87□□□□□ -0.35
COPB1-208ENST00000532088 TFDP3Q5H9I0 405 aa12.87□□□□□ -0.35
COPB1-208ENST00000532088 PPP6R3Q5H9R7 873 aaPredicted RBP12.87□□□□□ -0.35
COPB1-208ENST00000532088 LY6G5CQ5SRR4 150 aa12.87□□□□□ -0.35
COPB1-208ENST00000532088 ZFYVE27Q5T4F4 411 aa12.87□□□□□ -0.35
COPB1-208ENST00000532088 FAM72AQ5TYM5 149 aa12.87□□□□□ -0.35
COPB1-208ENST00000532088 FAM72DQ6L9T8 149 aa12.87□□□□□ -0.35
COPB1-208ENST00000532088 RFWD3Q6PCD5 774 aa12.87□□□□□ -0.35
COPB1-208ENST00000532088 C1orf228Q6PIY5 440 aa12.87□□□□□ -0.35
COPB1-208ENST00000532088 ZNF783Q6ZMS7 281 aa12.87□□□□□ -0.35
COPB1-208ENST00000532088 RFX8Q6ZV50 586 aa12.87□□□□□ -0.35
COPB1-208ENST00000532088 C14orf80Q86SX3 495 aa12.87□□□□□ -0.35
COPB1-208ENST00000532088 SETD3Q86TU7 594 aaPredicted RBP12.87□□□□□ -0.35
COPB1-208ENST00000532088 NLRP14Q86W24 1093 aa12.87□□□□□ -0.35
COPB1-208ENST00000532088 FAM72BQ86X60 149 aa12.87□□□□□ -0.35
COPB1-208ENST00000532088 C17orf53Q8N3J3 647 aaPredicted RBP12.87□□□□□ -0.35
COPB1-208ENST00000532088 LZTR1Q8N653 840 aa12.87□□□□□ -0.35
COPB1-208ENST00000532088 RTL3Q8N8U3 475 aaKnown RBP12.87□□□□□ -0.35
COPB1-208ENST00000532088 TTC16Q8NEE8 873 aa12.87□□□□□ -0.35
COPB1-208ENST00000532088 ALG3Q92685 438 aa12.87□□□□□ -0.35
COPB1-208ENST00000532088 IGSF8Q969P0 613 aa12.87□□□□□ -0.35
COPB1-208ENST00000532088 CSPG4P5Q96PW8 444 aa12.87□□□□□ -0.35
COPB1-208ENST00000532088 XPO6Q96QU8 1125 aaKnown RBP12.87□□□□□ -0.35
COPB1-208ENST00000532088 NAPGQ99747 312 aaPredicted RBP12.87□□□□□ -0.35
COPB1-208ENST00000532088 C8orf33Q9H7E9 229 aaPredicted RBP12.87□□□□□ -0.35
COPB1-208ENST00000532088 FBXO10Q9UK96 956 aa12.87□□□□□ -0.35
COPB1-208ENST00000532088 PACSIN2Q9UNF0 486 aaPredicted RBP12.87□□□□□ -0.35
COPB1-208ENST00000532088 DUSP12Q9UNI6 340 aa12.87□□□□□ -0.35
COPB1-208ENST00000532088 EYSQ5T1H1 3165 aa12.87□□□□□ -0.35
COPB1-208ENST00000532088 CTAGE9A4FU28 777 aa12.86□□□□□ -0.35
COPB1-208ENST00000532088 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.86□□□□□ -0.35
COPB1-208ENST00000532088 DCLK1O15075 740 aa12.86□□□□□ -0.35
COPB1-208ENST00000532088 CREB3O43889 395 aa12.86□□□□□ -0.35
COPB1-208ENST00000532088 SRGAP2O75044 1071 aa12.86□□□□□ -0.35
COPB1-208ENST00000532088 LUC7L3O95232 432 aaKnown RBP12.86□□□□□ -0.35
COPB1-208ENST00000532088 ARSAP15289 507 aa12.86□□□□□ -0.35
COPB1-208ENST00000532088 GOT1P17174 413 aa12.86□□□□□ -0.35
COPB1-208ENST00000532088 TCP1P17987 556 aaKnown RBP12.86□□□□□ -0.35
COPB1-208ENST00000532088 GJC1P36383 396 aa12.86□□□□□ -0.35
COPB1-208ENST00000532088 CDKN2BP42772 138 aa12.86□□□□□ -0.35
COPB1-208ENST00000532088 SLC12A1Q13621 1099 aa12.86□□□□□ -0.35
COPB1-208ENST00000532088 TFDP2Q14188 446 aa12.86□□□□□ -0.35
COPB1-208ENST00000532088 ANKRD20A8PQ5CZ79 823 aa12.86□□□□□ -0.35
COPB1-208ENST00000532088 PAPD7Q5XG87 772 aaKnown RBP12.86□□□□□ -0.35
COPB1-208ENST00000532088 SLC9A4Q6AI14 798 aa12.86□□□□□ -0.35
COPB1-208ENST00000532088 TRIM68Q6AZZ1 485 aa12.86□□□□□ -0.35
COPB1-208ENST00000532088 MFSD7Q6UXD7 560 aa12.86□□□□□ -0.35
COPB1-208ENST00000532088 SPOCD1Q6ZMY3 1216 aa12.86□□□□□ -0.35
COPB1-208ENST00000532088 TMEM25Q86YD3 366 aa12.86□□□□□ -0.35
COPB1-208ENST00000532088 CCDC117Q8IWD4 279 aaPredicted RBP12.86□□□□□ -0.35
COPB1-208ENST00000532088 SUGP1Q8IWZ8 645 aaKnown RBP12.86□□□□□ -0.35
COPB1-208ENST00000532088 ETFBKMTQ8IXQ9 262 aa12.86□□□□□ -0.35
COPB1-208ENST00000532088 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.86□□□□□ -0.35
COPB1-208ENST00000532088 FIBINQ8TAL6 211 aa12.86□□□□□ -0.35
COPB1-208ENST00000532088 CSGALNACT1Q8TDX6 532 aa12.86□□□□□ -0.35
COPB1-208ENST00000532088 DDI1Q8WTU0 396 aa12.86□□□□□ -0.35
COPB1-208ENST00000532088 RSAD2Q8WXG1 361 aa12.86□□□□□ -0.35
COPB1-208ENST00000532088 EXOC4Q96A65 974 aa12.86□□□□□ -0.35
COPB1-208ENST00000532088 MYEOVQ96EZ4 313 aa12.86□□□□□ -0.35
COPB1-208ENST00000532088 PBKQ96KB5 322 aa12.86□□□□□ -0.35
COPB1-208ENST00000532088 RNF157Q96PX1 679 aa12.86□□□□□ -0.35
COPB1-208ENST00000532088 BBS2Q9BXC9 721 aa12.86□□□□□ -0.35
COPB1-208ENST00000532088 CALN1Q9BXU9 219 aa12.86□□□□□ -0.35
COPB1-208ENST00000532088 EBF3Q9H4W6 596 aa12.86□□□□□ -0.35
COPB1-208ENST00000532088 ARHGEF4Q9NR80 690 aa12.86□□□□□ -0.35
COPB1-208ENST00000532088 ZNF212Q9UDV6 495 aa12.86□□□□□ -0.35
COPB1-208ENST00000532088 SORCS3Q9UPU3 1222 aa12.86□□□□□ -0.35
COPB1-208ENST00000532088 TBC1D30Q9Y2I9 924 aa12.86□□□□□ -0.35
COPB1-208ENST00000532088 SNX10Q9Y5X0 201 aa12.86□□□□□ -0.35
COPB1-208ENST00000532088 COL4A2P08572 1712 aa12.85□□□□□ -0.35
COPB1-208ENST00000532088 hCG_1818297A0A087WSY0 165 aa12.85□□□□□ -0.35
COPB1-208ENST00000532088 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.85□□□□□ -0.35
COPB1-208ENST00000532088 CXorf51AA0A1B0GTR3 108 aa12.85□□□□□ -0.35
COPB1-208ENST00000532088 ESPNB1AK53 854 aa12.85□□□□□ -0.35
COPB1-208ENST00000532088 SCAMP3O14828 347 aaKnown RBP12.85□□□□□ -0.35
COPB1-208ENST00000532088 DAPK3O43293 454 aa12.85□□□□□ -0.35
COPB1-208ENST00000532088 TBL1XO60907 577 aa12.85□□□□□ -0.35
COPB1-208ENST00000532088 ASGR2P07307 311 aa12.85□□□□□ -0.35
COPB1-208ENST00000532088 CD48P09326 243 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms