RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 ILVBLA1L0T0 632 aa14.87□□□□□ -0.03
CPSF1-206ENST00000531480 FGF10O15520 208 aaPredicted RBP14.87□□□□□ -0.03
CPSF1-206ENST00000531480 ATG13O75143 517 aa14.87□□□□□ -0.03
CPSF1-206ENST00000531480 C7P10643 843 aa14.87□□□□□ -0.03
CPSF1-206ENST00000531480 MTAPQ13126 283 aa14.87□□□□□ -0.03
CPSF1-206ENST00000531480 ZNF177Q13360 481 aaPredicted RBP14.87□□□□□ -0.03
CPSF1-206ENST00000531480 DPYSQ14117 519 aa14.87□□□□□ -0.03
CPSF1-206ENST00000531480 E2F5Q15329 346 aa14.87□□□□□ -0.03
CPSF1-206ENST00000531480 HADHQ16836 314 aaKnown RBP14.87□□□□□ -0.03
CPSF1-206ENST00000531480 PITRM1Q5JRX3 1037 aa14.87□□□□□ -0.03
CPSF1-206ENST00000531480 KCNT1Q5JUK3 1230 aa14.87□□□□□ -0.03
CPSF1-206ENST00000531480 EMC10Q5UCC4 262 aa14.87□□□□□ -0.03
CPSF1-206ENST00000531480 VSIG1Q86XK7 387 aa14.87□□□□□ -0.03
CPSF1-206ENST00000531480 RTL3Q8N8U3 475 aaKnown RBP14.87□□□□□ -0.03
CPSF1-206ENST00000531480 LRRC57Q8N9N7 239 aa14.87□□□□□ -0.03
CPSF1-206ENST00000531480 KDM1BQ8NB78 822 aa14.87□□□□□ -0.03
CPSF1-206ENST00000531480 DTWD2Q8NBA8 298 aa14.87□□□□□ -0.03
CPSF1-206ENST00000531480 GABRG3Q99928 467 aa14.87□□□□□ -0.03
CPSF1-206ENST00000531480 FEM1AQ9BSK4 669 aa14.87□□□□□ -0.03
CPSF1-206ENST00000531480 DHX35Q9H5Z1 703 aaKnown RBP14.87□□□□□ -0.03
CPSF1-206ENST00000531480 CD248Q9HCU0 757 aa14.87□□□□□ -0.03
CPSF1-206ENST00000531480 PRMT8Q9NR22 394 aaPredicted RBP14.87□□□□□ -0.03
CPSF1-206ENST00000531480 FAM86C1Q9NVL1 165 aa14.87□□□□□ -0.03
CPSF1-206ENST00000531480 RCOR3Q9P2K3 495 aaPredicted RBP14.87□□□□□ -0.03
CPSF1-206ENST00000531480 ALG6Q9Y672 507 aa14.87□□□□□ -0.03
CPSF1-206ENST00000531480 A0A0U1RQJ8 604 aa14.86□□□□□ -0.03
CPSF1-206ENST00000531480 ZNF487B1APH4 448 aa14.86□□□□□ -0.03
CPSF1-206ENST00000531480 ADAM23O75077 832 aa14.86□□□□□ -0.03
CPSF1-206ENST00000531480 KRT7P08729 469 aa14.86□□□□□ -0.03
CPSF1-206ENST00000531480 DLDP09622 509 aaKnown RBP14.86□□□□□ -0.03
CPSF1-206ENST00000531480 TDGF1P13385 188 aa14.86□□□□□ -0.03
CPSF1-206ENST00000531480 IL4RP24394 825 aa14.86□□□□□ -0.03
CPSF1-206ENST00000531480 MZF1P28698 734 aaPredicted RBP14.86□□□□□ -0.03
CPSF1-206ENST00000531480 EPHB2P29323 1055 aa14.86□□□□□ -0.03
CPSF1-206ENST00000531480 PTPRNQ16849 979 aa14.86□□□□□ -0.03
CPSF1-206ENST00000531480 SMTNL2Q2TAL5 461 aa14.86□□□□□ -0.03
CPSF1-206ENST00000531480 C6orf118Q5T5N4 469 aa14.86□□□□□ -0.03
CPSF1-206ENST00000531480 EGFLAMQ63HQ2 1017 aa14.86□□□□□ -0.03
CPSF1-206ENST00000531480 MBLAC2Q68D91 279 aa14.86□□□□□ -0.03
CPSF1-206ENST00000531480 RFX8Q6ZV50 586 aa14.86□□□□□ -0.03
CPSF1-206ENST00000531480 SYT13Q7L8C5 426 aa14.86□□□□□ -0.03
CPSF1-206ENST00000531480 TRMT11Q7Z4G4 463 aaKnown RBP14.86□□□□□ -0.03
CPSF1-206ENST00000531480 CCDC117Q8IWD4 279 aaPredicted RBP14.86□□□□□ -0.03
CPSF1-206ENST00000531480 MAML2Q8IZL2 1156 aaPredicted RBP14.86□□□□□ -0.03
CPSF1-206ENST00000531480 UMODL1-AS1Q8N2C9 162 aa14.86□□□□□ -0.03
CPSF1-206ENST00000531480 ZNF513Q8N8E2 541 aaPredicted RBP14.86□□□□□ -0.03
CPSF1-206ENST00000531480 RPLP0P6Q8NHW5 317 aa14.86□□□□□ -0.03
CPSF1-206ENST00000531480 ATRIPQ8WXE1 791 aa14.86□□□□□ -0.03
CPSF1-206ENST00000531480 ACDQ96AP0 544 aa14.86□□□□□ -0.03
CPSF1-206ENST00000531480 MYO19Q96H55 970 aa14.86□□□□□ -0.03
CPSF1-206ENST00000531480 PHOX2BQ99453 314 aa14.86□□□□□ -0.03
CPSF1-206ENST00000531480 KLC2Q9H0B6 622 aa14.86□□□□□ -0.03
CPSF1-206ENST00000531480 NOL6Q9H6R4 1146 aaKnown RBP14.86□□□□□ -0.03
CPSF1-206ENST00000531480 PCDH18Q9HCL0 1135 aa14.86□□□□□ -0.03
CPSF1-206ENST00000531480 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.86□□□□□ -0.03
CPSF1-206ENST00000531480 NDFIP2Q9NV92 336 aa14.86□□□□□ -0.03
CPSF1-206ENST00000531480 CWC15Q9P013 229 aaKnown RBP14.86□□□□□ -0.03
CPSF1-206ENST00000531480 MMP17Q9ULZ9 603 aa14.86□□□□□ -0.03
CPSF1-206ENST00000531480 NUP205Q92621 2012 aa14.86□□□□□ -0.03
CPSF1-206ENST00000531480 NYNRINQ9P2P1 1898 aaKnown RBP14.85□□□□□ -0.03
CPSF1-206ENST00000531480 EEF2KO00418 725 aaKnown RBP14.85□□□□□ -0.03
CPSF1-206ENST00000531480 CREB3O43889 395 aa14.85□□□□□ -0.03
CPSF1-206ENST00000531480 ASLP04424 464 aa14.85□□□□□ -0.03
CPSF1-206ENST00000531480 GOT1P17174 413 aa14.85□□□□□ -0.03
CPSF1-206ENST00000531480 COMTP21964 271 aa14.85□□□□□ -0.03
CPSF1-206ENST00000531480 OR1E1P30953 314 aa14.85□□□□□ -0.03
CPSF1-206ENST00000531480 HOXA6P31267 233 aa14.85□□□□□ -0.03
CPSF1-206ENST00000531480 CSKP41240 450 aa14.85□□□□□ -0.03
CPSF1-206ENST00000531480 NOP2P46087 812 aaKnown RBP14.85□□□□□ -0.03
CPSF1-206ENST00000531480 TPI1P60174 286 aa14.85□□□□□ -0.03
CPSF1-206ENST00000531480 KIF5AQ12840 1032 aa14.85□□□□□ -0.03
CPSF1-206ENST00000531480 ATP13A4Q4VNC1 1196 aa14.85□□□□□ -0.03
CPSF1-206ENST00000531480 AFMIDQ63HM1 303 aa14.85□□□□□ -0.03
CPSF1-206ENST00000531480 TFAP2DQ7Z6R9 452 aa14.85□□□□□ -0.03
CPSF1-206ENST00000531480 KIAA1328Q86T90 577 aa14.85□□□□□ -0.03
CPSF1-206ENST00000531480 C1orf210Q8IVY1 113 aa14.85□□□□□ -0.03
CPSF1-206ENST00000531480 APCDD1Q8J025 514 aa14.85□□□□□ -0.03
CPSF1-206ENST00000531480 RNF10Q8N5U6 811 aaKnown RBP14.85□□□□□ -0.03
CPSF1-206ENST00000531480 UCMAQ8WVF2 138 aa14.85□□□□□ -0.03
CPSF1-206ENST00000531480 FAF2Q96CS3 445 aa14.85□□□□□ -0.03
CPSF1-206ENST00000531480 MRGPRX3Q96LB0 322 aa14.85□□□□□ -0.03
CPSF1-206ENST00000531480 PSMB7Q99436 277 aa14.85□□□□□ -0.03
CPSF1-206ENST00000531480 ACE2Q9BYF1 805 aaPredicted RBP14.85□□□□□ -0.03
CPSF1-206ENST00000531480 TMEM245Q9H330 911 aa14.85□□□□□ -0.03
CPSF1-206ENST00000531480 KCNF1Q9H3M0 494 aa14.85□□□□□ -0.03
CPSF1-206ENST00000531480 CATSPERBQ9H7T0 1116 aa14.85□□□□□ -0.03
CPSF1-206ENST00000531480 ZWILCHQ9H900 591 aa14.85□□□□□ -0.03
CPSF1-206ENST00000531480 C2orf42Q9NWW7 574 aa14.85□□□□□ -0.03
CPSF1-206ENST00000531480 DONSONQ9NYP3 566 aa14.85□□□□□ -0.03
CPSF1-206ENST00000531480 FANCMQ8IYD8 2048 aa14.85□□□□□ -0.03
CPSF1-206ENST00000531480 A0A0D9SEW6 157 aa14.84□□□□□ -0.03
CPSF1-206ENST00000531480 C3orf70A6NLC5 250 aaPredicted RBP14.84□□□□□ -0.03
CPSF1-206ENST00000531480 DCLK1O15075 740 aa14.84□□□□□ -0.03
CPSF1-206ENST00000531480 PSTPIP1O43586 416 aa14.84□□□□□ -0.03
CPSF1-206ENST00000531480 GALR2O43603 387 aaPredicted RBP14.84□□□□□ -0.03
CPSF1-206ENST00000531480 MOCS3O95396 460 aa14.84□□□□□ -0.03
CPSF1-206ENST00000531480 ATP5BP06576 529 aaKnown RBP14.84□□□□□ -0.03
CPSF1-206ENST00000531480 RHOCP08134 193 aa14.84□□□□□ -0.03
CPSF1-206ENST00000531480 SRPRAP08240 638 aaKnown RBP14.84□□□□□ -0.03
CPSF1-206ENST00000531480 CCDC175P0C221 793 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms