RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 GOT1P17174 413 aa13.22□□□□□ -0.29
TM9SF1-211ENST00000531406 PSMD8P48556 350 aa13.22□□□□□ -0.29
TM9SF1-211ENST00000531406 STK19P49842 368 aaPredicted RBP13.22□□□□□ -0.29
TM9SF1-211ENST00000531406 CDK17Q00537 523 aa13.22□□□□□ -0.29
TM9SF1-211ENST00000531406 IL9RQ01113 521 aa13.22□□□□□ -0.29
TM9SF1-211ENST00000531406 PDCLQ13371 301 aa13.22□□□□□ -0.29
TM9SF1-211ENST00000531406 SLC12A1Q13621 1099 aa13.22□□□□□ -0.29
TM9SF1-211ENST00000531406 PRAMEF14Q5SWL7 426 aa13.22□□□□□ -0.29
TM9SF1-211ENST00000531406 GJB7Q6PEY0 223 aa13.22□□□□□ -0.29
TM9SF1-211ENST00000531406 SND1Q7KZF4 910 aaKnown RBP eCLIP13.22□□□□□ -0.294e-9■■■■□ 25.6
TM9SF1-211ENST00000531406 MARCH9Q86YJ5 346 aa13.22□□□□□ -0.29
TM9SF1-211ENST00000531406 CCAR2Q8N163 923 aaKnown RBP13.22□□□□□ -0.29
TM9SF1-211ENST00000531406 WDTC1Q8N5D0 677 aa13.22□□□□□ -0.29
TM9SF1-211ENST00000531406 MDM1Q8TC05 714 aa13.22□□□□□ -0.29
TM9SF1-211ENST00000531406 PTPRN2Q92932 1015 aa13.22□□□□□ -0.29
TM9SF1-211ENST00000531406 SKA1Q96BD8 255 aa13.22□□□□□ -0.29
TM9SF1-211ENST00000531406 CRACR2AQ9BSW2 395 aa13.22□□□□□ -0.29
TM9SF1-211ENST00000531406 TMEM63CQ9P1W3 806 aa13.22□□□□□ -0.29
TM9SF1-211ENST00000531406 GPSM3Q9Y4H4 160 aa13.22□□□□□ -0.29
TM9SF1-211ENST00000531406 ANKRD11Q6UB99 2663 aaPredicted RBP13.21□□□□□ -0.29
TM9SF1-211ENST00000531406 A0A1W2PR77 199 aa13.21□□□□□ -0.29
TM9SF1-211ENST00000531406 BECN2A8MW95 431 aa13.21□□□□□ -0.29
TM9SF1-211ENST00000531406 WNT9AO14904 365 aa13.21□□□□□ -0.29
TM9SF1-211ENST00000531406 IL1BP01584 269 aa13.21□□□□□ -0.29
TM9SF1-211ENST00000531406 GLI1P08151 1106 aa13.21□□□□□ -0.29
TM9SF1-211ENST00000531406 SLC2A3P11169 496 aa13.21□□□□□ -0.29
TM9SF1-211ENST00000531406 PDGFRAP16234 1089 aa13.21□□□□□ -0.29
TM9SF1-211ENST00000531406 SLC9A1P19634 815 aa13.21□□□□□ -0.29
TM9SF1-211ENST00000531406 ABCB4P21439 1286 aa13.21□□□□□ -0.29
TM9SF1-211ENST00000531406 C5AR1P21730 350 aa13.21□□□□□ -0.29
TM9SF1-211ENST00000531406 MZF1P28698 734 aaPredicted RBP13.21□□□□□ -0.29
TM9SF1-211ENST00000531406 NNMTP40261 264 aa13.21□□□□□ -0.29
TM9SF1-211ENST00000531406 USP8P40818 1118 aa13.21□□□□□ -0.29
TM9SF1-211ENST00000531406 NUMBP49757 651 aa13.21□□□□□ -0.29
TM9SF1-211ENST00000531406 PLK1P53350 603 aa13.21□□□□□ -0.29
TM9SF1-211ENST00000531406 ELAVL3Q14576 367 aaKnown RBP13.21□□□□□ -0.29
TM9SF1-211ENST00000531406 INAVAQ3KP66 663 aa13.21□□□□□ -0.29
TM9SF1-211ENST00000531406 TRIM65Q6PJ69 517 aa13.21□□□□□ -0.29
TM9SF1-211ENST00000531406 C19orf48Q6RUI8 117 aa13.21□□□□□ -0.29
TM9SF1-211ENST00000531406 CIR1Q86X95 450 aaPredicted RBP13.21□□□□□ -0.29
TM9SF1-211ENST00000531406 DEFB106AQ8N104 65 aa13.21□□□□□ -0.29
TM9SF1-211ENST00000531406 GALNT15Q8N3T1 639 aa13.21□□□□□ -0.29
TM9SF1-211ENST00000531406 OR14C36Q8NHC7 312 aa13.21□□□□□ -0.29
TM9SF1-211ENST00000531406 SLC2A13Q96QE2 648 aa13.21□□□□□ -0.29
TM9SF1-211ENST00000531406 ELF4Q99607 663 aaPredicted RBP13.21□□□□□ -0.29
TM9SF1-211ENST00000531406 FAM204AQ9H8W3 233 aa13.21□□□□□ -0.29
TM9SF1-211ENST00000531406 AASDHPPTQ9NRN7 309 aa13.21□□□□□ -0.29
TM9SF1-211ENST00000531406 DDIT4Q9NX09 232 aa13.21□□□□□ -0.29
TM9SF1-211ENST00000531406 FTSJ1Q9UET6 329 aa13.21□□□□□ -0.29
TM9SF1-211ENST00000531406 SYNJ2BP-COX16A0A087WUM0 186 aa13.2□□□□□ -0.3
TM9SF1-211ENST00000531406 VAV1P15498 845 aa13.2□□□□□ -0.3
TM9SF1-211ENST00000531406 CD38P28907 300 aa13.2□□□□□ -0.3
TM9SF1-211ENST00000531406 CCR1P32246 355 aa13.2□□□□□ -0.3
TM9SF1-211ENST00000531406 ADPRHP54922 357 aa13.2□□□□□ -0.3
TM9SF1-211ENST00000531406 OXCT1P55809 520 aa13.2□□□□□ -0.3
TM9SF1-211ENST00000531406 APBA1Q02410 837 aa13.2□□□□□ -0.3
TM9SF1-211ENST00000531406 SULT2A1Q06520 285 aa13.2□□□□□ -0.3
TM9SF1-211ENST00000531406 CAMK2BQ13554 666 aa13.2□□□□□ -0.3
TM9SF1-211ENST00000531406 SHBQ15464 509 aa13.2□□□□□ -0.3
TM9SF1-211ENST00000531406 SMAD1Q15797 465 aaKnown RBP13.2□□□□□ -0.3
TM9SF1-211ENST00000531406 CAMK4Q16566 473 aa13.2□□□□□ -0.3
TM9SF1-211ENST00000531406 ARHGAP44Q17R89 818 aa13.2□□□□□ -0.3
TM9SF1-211ENST00000531406 ZSCAN23Q3MJ62 389 aa13.2□□□□□ -0.3
TM9SF1-211ENST00000531406 CCDC157Q569K6 752 aa13.2□□□□□ -0.3
TM9SF1-211ENST00000531406 EFHC1Q5JVL4 640 aa13.2□□□□□ -0.3
TM9SF1-211ENST00000531406 RABGAP1LQ5R372 815 aa13.2□□□□□ -0.3
TM9SF1-211ENST00000531406 TTC39BQ5VTQ0 682 aaPredicted RBP13.2□□□□□ -0.3
TM9SF1-211ENST00000531406 CXorf57Q6NSI4 855 aaKnown RBP13.2□□□□□ -0.3
TM9SF1-211ENST00000531406 FBXL22Q6P050 247 aa13.2□□□□□ -0.3
TM9SF1-211ENST00000531406 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.2□□□□□ -0.3
TM9SF1-211ENST00000531406 GATAD2AQ86YP4 633 aa13.2□□□□□ -0.3
TM9SF1-211ENST00000531406 FRS2Q8WU20 508 aa13.2□□□□□ -0.3
TM9SF1-211ENST00000531406 SHC3Q92529 594 aa13.2□□□□□ -0.3
TM9SF1-211ENST00000531406 RNF34Q969K3 372 aa13.2□□□□□ -0.3
TM9SF1-211ENST00000531406 SERAC1Q96JX3 654 aa13.2□□□□□ -0.3
TM9SF1-211ENST00000531406 PPP1R13BQ96KQ4 1090 aa13.2□□□□□ -0.3
TM9SF1-211ENST00000531406 FAM81BQ96LP2 452 aa13.2□□□□□ -0.3
TM9SF1-211ENST00000531406 CPXM1Q96SM3 734 aa13.2□□□□□ -0.3
TM9SF1-211ENST00000531406 ASNSD1Q9NWL6 643 aa13.2□□□□□ -0.3
TM9SF1-211ENST00000531406 COX16Q9P0S2 106 aa13.2□□□□□ -0.3
TM9SF1-211ENST00000531406 DKK4Q9UBT3 224 aa13.2□□□□□ -0.3
TM9SF1-211ENST00000531406 RWDD2AQ9UIY3 292 aa13.2□□□□□ -0.3
TM9SF1-211ENST00000531406 TPX2Q9ULW0 747 aaKnown RBP13.2□□□□□ -0.3
TM9SF1-211ENST00000531406 RAXQ9Y2V3 346 aa13.2□□□□□ -0.3
TM9SF1-211ENST00000531406 A0A1B0GVM2 712 aa13.19□□□□□ -0.3
TM9SF1-211ENST00000531406 FAM149AA5PLN7 773 aa13.19□□□□□ -0.3
TM9SF1-211ENST00000531406 TRABD2BA6NFA1 517 aa13.19□□□□□ -0.3
TM9SF1-211ENST00000531406 TCAF2A6NFQ2 919 aa13.19□□□□□ -0.3
TM9SF1-211ENST00000531406 LATO43561 262 aa13.19□□□□□ -0.3
TM9SF1-211ENST00000531406 HSF2BPO75031 334 aa13.19□□□□□ -0.3
TM9SF1-211ENST00000531406 GRAP2O75791 330 aa13.19□□□□□ -0.3
TM9SF1-211ENST00000531406 ITGAVP06756 1048 aa13.19□□□□□ -0.3
TM9SF1-211ENST00000531406 DRD3P35462 400 aa13.19□□□□□ -0.3
TM9SF1-211ENST00000531406 VASPP50552 380 aaPredicted RBP13.19□□□□□ -0.3
TM9SF1-211ENST00000531406 COL9A2Q14055 689 aaPredicted RBP13.19□□□□□ -0.3
TM9SF1-211ENST00000531406 DHRS13Q6UX07 377 aa13.19□□□□□ -0.3
TM9SF1-211ENST00000531406 GBP6Q6ZN66 633 aa13.19□□□□□ -0.3
TM9SF1-211ENST00000531406 PASD1Q8IV76 773 aa13.19□□□□□ -0.3
TM9SF1-211ENST00000531406 SAP25Q8TEE9 199 aa13.19□□□□□ -0.3
TM9SF1-211ENST00000531406 ALG14Q96F25 216 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms