RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 TAF4O00268 1085 aa14.44□□□□□ -0.1
PCF11-204ENST00000530660 CCRL2O00421 344 aa14.44□□□□□ -0.1
PCF11-204ENST00000530660 GCATO75600 419 aa14.44□□□□□ -0.1
PCF11-204ENST00000530660 MYL4P12829 197 aa14.44□□□□□ -0.1
PCF11-204ENST00000530660 COPZ1P61923 177 aa14.44□□□□□ -0.1
PCF11-204ENST00000530660 MAPRE1Q15691 268 aaKnown RBP14.44□□□□□ -0.1
PCF11-204ENST00000530660 BTBD8Q5XKL5 378 aa14.44□□□□□ -0.1
PCF11-204ENST00000530660 MAMDC4Q6UXC1 1216 aa14.44□□□□□ -0.1
PCF11-204ENST00000530660 MON1BQ7L1V2 547 aa14.44□□□□□ -0.1
PCF11-204ENST00000530660 ZNF354CQ86Y25 554 aa14.44□□□□□ -0.1
PCF11-204ENST00000530660 CXorf38Q8TB03 319 aa14.44□□□□□ -0.1
PCF11-204ENST00000530660 TAS1R2Q8TE23 839 aa14.44□□□□□ -0.1
PCF11-204ENST00000530660 SLCO4A1Q96BD0 722 aa14.44□□□□□ -0.1
PCF11-204ENST00000530660 MED30Q96HR3 178 aa14.44□□□□□ -0.1
PCF11-204ENST00000530660 FBXL20Q96IG2 436 aa14.44□□□□□ -0.1
PCF11-204ENST00000530660 H0YJX3 145 aa14.43□□□□□ -0.1
PCF11-204ENST00000530660 TIPRLO75663 272 aa14.43□□□□□ -0.1
PCF11-204ENST00000530660 SMAD1Q15797 465 aaKnown RBP14.43□□□□□ -0.1
PCF11-204ENST00000530660 TFDP3Q5H9I0 405 aa14.43□□□□□ -0.1
PCF11-204ENST00000530660 TRMT10BQ6PF06 316 aaKnown RBP14.43□□□□□ -0.1
PCF11-204ENST00000530660 MOCOSQ96EN8 888 aa14.43□□□□□ -0.1
PCF11-204ENST00000530660 ADA2Q9NZK5 511 aa14.43□□□□□ -0.1
PCF11-204ENST00000530660 IGKV6D-41A0A0C4DH26 115 aa14.43□□□□□ -0.1
PCF11-204ENST00000530660 GOLGA8CPA6NN73 597 aa14.43□□□□□ -0.1
PCF11-204ENST00000530660 FAM155AB1AL88 458 aaPredicted RBP14.43□□□□□ -0.1
PCF11-204ENST00000530660 RGS13O14921 159 aa14.43□□□□□ -0.1
PCF11-204ENST00000530660 HOXC11O43248 304 aaPredicted RBP14.43□□□□□ -0.1
PCF11-204ENST00000530660 IL18RAPO95256 599 aa14.43□□□□□ -0.1
PCF11-204ENST00000530660 DDX5P17844 614 aaKnown RBP14.43□□□□□ -0.1
PCF11-204ENST00000530660 IFNA8P32881 189 aa14.43□□□□□ -0.1
PCF11-204ENST00000530660 LRIT3Q3SXY7 679 aa14.43□□□□□ -0.1
PCF11-204ENST00000530660 AKAP14Q86UN6 197 aa14.43□□□□□ -0.1
PCF11-204ENST00000530660 SLC22A16Q86VW1 577 aa14.43□□□□□ -0.1
PCF11-204ENST00000530660 ZNF781Q8N8C0 355 aa14.43□□□□□ -0.1
PCF11-204ENST00000530660 FBXL18Q96ME1 805 aa14.43□□□□□ -0.1
PCF11-204ENST00000530660 SLC39A3Q9BRY0 314 aa14.43□□□□□ -0.1
PCF11-204ENST00000530660 IMPG2Q9BZV3 1241 aa14.43□□□□□ -0.1
PCF11-204ENST00000530660 QPCTLQ9NXS2 382 aa14.43□□□□□ -0.1
PCF11-204ENST00000530660 CDK5RAP2Q96SN8 1893 aa14.43□□□□□ -0.1
PCF11-204ENST00000530660 RGSL1A5PLK6 1076 aa14.43□□□□□ -0.1
PCF11-204ENST00000530660 B4GAT1O43505 415 aa14.43□□□□□ -0.1
PCF11-204ENST00000530660 ADRB2P07550 413 aa14.43□□□□□ -0.1
PCF11-204ENST00000530660 ALOX5P09917 674 aa14.43□□□□□ -0.1
PCF11-204ENST00000530660 HOXA13P31271 388 aaPredicted RBP14.43□□□□□ -0.1
PCF11-204ENST00000530660 CDKN2BP42772 138 aa14.43□□□□□ -0.1
PCF11-204ENST00000530660 ACADSBP45954 432 aa14.43□□□□□ -0.1
PCF11-204ENST00000530660 PTK2BQ14289 1009 aa14.43□□□□□ -0.1
PCF11-204ENST00000530660 PCLAFQ15004 111 aa14.43□□□□□ -0.1
PCF11-204ENST00000530660 SMTNL2Q2TAL5 461 aa14.43□□□□□ -0.1
PCF11-204ENST00000530660 GLT1D1Q96MS3 346 aa14.43□□□□□ -0.1
PCF11-204ENST00000530660 NPAS2Q99743 824 aa14.43□□□□□ -0.1
PCF11-204ENST00000530660 PLAC1Q9HBJ0 212 aa14.43□□□□□ -0.1
PCF11-204ENST00000530660 ZNF229Q9UJW7 825 aa14.43□□□□□ -0.1
PCF11-204ENST00000530660 PTBP2Q9UKA9 531 aaKnown RBP14.43□□□□□ -0.1
PCF11-204ENST00000530660 DLGAP1O14490 977 aa14.42□□□□□ -0.1
PCF11-204ENST00000530660 CDK2AP1O14519 115 aa14.42□□□□□ -0.1
PCF11-204ENST00000530660 TMCC2O75069 709 aa14.42□□□□□ -0.1
PCF11-204ENST00000530660 TTKP33981 857 aa14.42□□□□□ -0.1
PCF11-204ENST00000530660 PRKAA2P54646 552 aa14.42□□□□□ -0.1
PCF11-204ENST00000530660 ART3Q13508 389 aa14.42□□□□□ -0.1
PCF11-204ENST00000530660 LGSNQ5TDP6 509 aa14.42□□□□□ -0.1
PCF11-204ENST00000530660 IQSEC1Q6DN90 963 aa14.42□□□□□ -0.1
PCF11-204ENST00000530660 UGT3A1Q6NUS8 523 aa14.42□□□□□ -0.1
PCF11-204ENST00000530660 CYGBQ8WWM9 190 aa14.42□□□□□ -0.1
PCF11-204ENST00000530660 HTRA1Q92743 480 aa14.42□□□□□ -0.1
PCF11-204ENST00000530660 NEK6Q9HC98 313 aa14.42□□□□□ -0.1
PCF11-204ENST00000530660 SLC17A6Q9P2U8 582 aa14.42□□□□□ -0.1
PCF11-204ENST00000530660 CRNNQ9UBG3 495 aaPredicted RBP14.42□□□□□ -0.1
PCF11-204ENST00000530660 ZC3H7BQ9UGR2 993 aaKnown RBP14.42□□□□□ -0.1
PCF11-204ENST00000530660 TBX3O15119 743 aa14.42□□□□□ -0.1
PCF11-204ENST00000530660 CST8O60676 142 aa14.42□□□□□ -0.1
PCF11-204ENST00000530660 UFL1O94874 794 aa14.42□□□□□ -0.1
PCF11-204ENST00000530660 SERPINE1P05121 402 aa14.42□□□□□ -0.1
PCF11-204ENST00000530660 RALGDSQ12967 914 aa14.42□□□□□ -0.1
PCF11-204ENST00000530660 ZNF846Q147U1 533 aa14.42□□□□□ -0.1
PCF11-204ENST00000530660 NFIXQ14938 502 aa14.42□□□□□ -0.1
PCF11-204ENST00000530660 VPS72Q15906 364 aa14.42□□□□□ -0.1
PCF11-204ENST00000530660 GPATCH4Q5T3I0 446 aaKnown RBP14.42□□□□□ -0.1
PCF11-204ENST00000530660 TMEM198Q66K66 360 aa14.42□□□□□ -0.1
PCF11-204ENST00000530660 CYP4V2Q6ZWL3 525 aaPredicted RBP14.42□□□□□ -0.1
PCF11-204ENST00000530660 CBR4Q8N4T8 237 aa14.42□□□□□ -0.1
PCF11-204ENST00000530660 ZFP90Q8TF47 636 aa14.42□□□□□ -0.1
PCF11-204ENST00000530660 RAD21L1Q9H4I0 556 aa14.42□□□□□ -0.1
PCF11-204ENST00000530660 SOX17Q9H6I2 414 aaPredicted RBP14.42□□□□□ -0.1
PCF11-204ENST00000530660 DHX33Q9H6R0 707 aaKnown RBP14.42□□□□□ -0.1
PCF11-204ENST00000530660 ATP13A3Q9H7F0 1226 aa14.42□□□□□ -0.1
PCF11-204ENST00000530660 PCDHAC2Q9Y5I4 1007 aa14.42□□□□□ -0.1
PCF11-204ENST00000530660 K7ENM7 598 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 AP3B1O00203 1094 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 VAPBO95292 243 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 RACK1P63244 317 aaKnown RBP14.41□□□□□ -0.1
PCF11-204ENST00000530660 PRKCQQ04759 706 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 SLC13A2Q13183 592 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 DPYSL3Q14195 570 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 PCSK7Q16549 785 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 MOXD1Q6UVY6 613 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 PLEKHG7Q6ZR37 379 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 CBWD2Q8IUF1 395 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 SLC9A9Q8IVB4 645 aa14.41□□□□□ -0.1
PCF11-204ENST00000530660 PGAM4Q8N0Y7 254 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms