RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 APOL1O14791 398 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 NARSO43776 548 aaKnown RBP12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 URI1O94763 535 aaPredicted RBP12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 PECAM1P16284 738 aaPredicted RBP12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 OR1E1P30953 314 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 GBE1Q04446 702 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 GAD2Q05329 585 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 SLC10A2Q12908 348 aaPredicted RBP12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 ZNF177Q13360 481 aaPredicted RBP12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 ASTLQ6HA08 431 aaPredicted RBP12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 CXorf57Q6NSI4 855 aaKnown RBP12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 C1orf228Q6PIY5 440 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 NPNTQ6UXI9 565 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 CPA6Q8N4T0 437 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 NAT16Q8N8M0 369 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 CHFRQ96EP1 664 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 RETREG1Q9H6L5 497 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 SAE1Q9UBE0 346 aaPredicted RBP12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 TTC7AQ9ULT0 858 aaPredicted RBP12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 TBC1D30Q9Y2I9 924 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 COL4A3Q01955 1670 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 H0Y626 953 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 PDE2AO00408 941 aaPredicted RBP12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 TRIM24O15164 1050 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 MFSD11O43934 449 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 CACNG3O60359 315 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 TJP3O95049 919 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 MAP3K6O95382 1288 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 GJA4P35212 333 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 MAPKAPK2P49137 400 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 TDGQ13569 410 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 SIX1Q15475 284 aaPredicted RBP12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 LONRF2Q1L5Z9 754 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 ITPRIPL2Q3MIP1 535 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 AFMIDQ63HM1 303 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 C12orf40Q86WS4 652 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 MFN1Q8IWA4 741 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 ARHGAP12Q8IWW6 846 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 ETFBKMTQ8IXQ9 262 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 UMODL1-AS1Q8N2C9 162 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 CCDC33Q8N5R6 958 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 FIBINQ8TAL6 211 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 ACTRT1Q8TDG2 376 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 ANKRD7Q92527 254 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 HAUS1Q96CS2 278 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 CELF6Q96J87 481 aaKnown RBP12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 LMLNQ96KR4 655 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 EPHX3Q9H6B9 360 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 PRDM16Q9HAZ2 1276 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 DTLQ9NZJ0 730 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 FBXO10Q9UK96 956 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 R3HDM2Q9Y2K5 976 aaKnown RBP12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 HEY1Q9Y5J3 304 aa12.48□□□□□ -0.41
TRAF3IP2-211ENST00000528599 TECTAO75443 2155 aa12.47□□□□□ -0.41
TRAF3IP2-211ENST00000528599 PGRMC1O00264 195 aaKnown RBP12.47□□□□□ -0.41
TRAF3IP2-211ENST00000528599 ZFXP17010 805 aaPredicted RBP12.47□□□□□ -0.41
TRAF3IP2-211ENST00000528599 SLC6A11P48066 632 aa12.47□□□□□ -0.41
TRAF3IP2-211ENST00000528599 SOX9P48436 509 aa12.47□□□□□ -0.41
TRAF3IP2-211ENST00000528599 NR1H3Q13133 447 aa12.47□□□□□ -0.41
TRAF3IP2-211ENST00000528599 CDH18Q13634 790 aa12.47□□□□□ -0.41
TRAF3IP2-211ENST00000528599 NAIF1Q69YI7 327 aaPredicted RBP12.47□□□□□ -0.41
TRAF3IP2-211ENST00000528599 SETD3Q86TU7 594 aaPredicted RBP12.47□□□□□ -0.41
TRAF3IP2-211ENST00000528599 FAM118BQ9BPY3 351 aa12.47□□□□□ -0.41
TRAF3IP2-211ENST00000528599 SLC39A8Q9C0K1 460 aa12.47□□□□□ -0.41
TRAF3IP2-211ENST00000528599 LRRC19Q9H756 370 aa12.47□□□□□ -0.41
TRAF3IP2-211ENST00000528599 TRPV5Q9NQA5 729 aa12.47□□□□□ -0.41
TRAF3IP2-211ENST00000528599 TICRRQ7Z2Z1 1910 aa12.46□□□□□ -0.41
TRAF3IP2-211ENST00000528599 COL4A2P08572 1712 aa12.46□□□□□ -0.41
TRAF3IP2-211ENST00000528599 A0A0D9SEW6 157 aa12.46□□□□□ -0.41
TRAF3IP2-211ENST00000528599 APOC4-APOC2K7ER74 178 aa12.46□□□□□ -0.41
TRAF3IP2-211ENST00000528599 RAMP2O60895 175 aa12.46□□□□□ -0.41
TRAF3IP2-211ENST00000528599 TULP3O75386 442 aa12.46□□□□□ -0.41
TRAF3IP2-211ENST00000528599 APOC2P02655 101 aa12.46□□□□□ -0.41
TRAF3IP2-211ENST00000528599 RHOCP08134 193 aa12.46□□□□□ -0.41
TRAF3IP2-211ENST00000528599 CISD3P0C7P0 127 aa12.46□□□□□ -0.41
TRAF3IP2-211ENST00000528599 TGM2P21980 687 aa12.46□□□□□ -0.41
TRAF3IP2-211ENST00000528599 MZF1P28698 734 aaPredicted RBP12.46□□□□□ -0.41
TRAF3IP2-211ENST00000528599 HLA-FP30511 346 aa12.46□□□□□ -0.41
TRAF3IP2-211ENST00000528599 CD70P32970 193 aa12.46□□□□□ -0.41
TRAF3IP2-211ENST00000528599 SERPINB6P35237 376 aa12.46□□□□□ -0.41
TRAF3IP2-211ENST00000528599 ACVRL1P37023 503 aa12.46□□□□□ -0.41
TRAF3IP2-211ENST00000528599 OPRD1P41143 372 aa12.46□□□□□ -0.41
TRAF3IP2-211ENST00000528599 NUMBP49757 651 aa12.46□□□□□ -0.41
TRAF3IP2-211ENST00000528599 NDST2P52849 883 aa12.46□□□□□ -0.41
TRAF3IP2-211ENST00000528599 GNA12Q03113 381 aa12.46□□□□□ -0.41
TRAF3IP2-211ENST00000528599 MESP2Q0VG99 397 aa12.46□□□□□ -0.41
TRAF3IP2-211ENST00000528599 LMAN2Q12907 356 aa12.46□□□□□ -0.41
TRAF3IP2-211ENST00000528599 C6orf118Q5T5N4 469 aa12.46□□□□□ -0.41
TRAF3IP2-211ENST00000528599 IER5LQ5T953 404 aa12.46□□□□□ -0.41
TRAF3IP2-211ENST00000528599 CCDC181Q5TID7 509 aa12.46□□□□□ -0.41
TRAF3IP2-211ENST00000528599 RNF219Q5W0B1 726 aaPredicted RBP12.46□□□□□ -0.41
TRAF3IP2-211ENST00000528599 LZTR1Q8N653 840 aa12.46□□□□□ -0.41
TRAF3IP2-211ENST00000528599 OR7D4Q8NG98 312 aa12.46□□□□□ -0.41
TRAF3IP2-211ENST00000528599 ACTL9Q8TC94 416 aa12.46□□□□□ -0.41
TRAF3IP2-211ENST00000528599 CSGALNACT1Q8TDX6 532 aa12.46□□□□□ -0.41
TRAF3IP2-211ENST00000528599 LRRN4Q8WUT4 740 aa12.46□□□□□ -0.41
TRAF3IP2-211ENST00000528599 ALG14Q96F25 216 aa12.46□□□□□ -0.41
TRAF3IP2-211ENST00000528599 SLC2A11Q9BYW1 496 aa12.46□□□□□ -0.41
TRAF3IP2-211ENST00000528599 C11orf16Q9NQ32 467 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms