RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 TMEM88Q6PEY1 159 aa6.45□□□□□ -1.38
PCF11-202ENST00000528336 KIAA1324Q6UXG2 1013 aaKnown RBP6.45□□□□□ -1.38
PCF11-202ENST00000528336 ADGRF4Q8IZF3 695 aa6.45□□□□□ -1.38
PCF11-202ENST00000528336 ADGRF3Q8IZF5 1079 aa6.45□□□□□ -1.38
PCF11-202ENST00000528336 NKAPQ8N5F7 415 aaKnown RBP6.45□□□□□ -1.38
PCF11-202ENST00000528336 ANKRD42Q8N9B4 389 aa6.45□□□□□ -1.38
PCF11-202ENST00000528336 ADPRHL1Q8NDY3 354 aa6.45□□□□□ -1.38
PCF11-202ENST00000528336 ERP27Q96DN0 273 aa6.45□□□□□ -1.38
PCF11-202ENST00000528336 ZNF347Q96SE7 839 aa6.45□□□□□ -1.38
PCF11-202ENST00000528336 HTATIP2Q9BUP3 242 aa6.45□□□□□ -1.38
PCF11-202ENST00000528336 CLIC5Q9NZA1 410 aa6.45□□□□□ -1.38
PCF11-202ENST00000528336 IPO11Q9UI26 975 aaKnown RBP6.45□□□□□ -1.38
PCF11-202ENST00000528336 PRXQ9BXM0 1461 aa6.45□□□□□ -1.38
PCF11-202ENST00000528336 ZNF804BA4D1E1 1349 aa6.45□□□□□ -1.38
PCF11-202ENST00000528336 E5RJQ4 531 aa6.44□□□□□ -1.38
PCF11-202ENST00000528336 UGDHO60701 494 aa6.44□□□□□ -1.38
PCF11-202ENST00000528336 CYP21A2P08686 494 aa6.44□□□□□ -1.38
PCF11-202ENST00000528336 IGFBP2P18065 325 aa6.44□□□□□ -1.38
PCF11-202ENST00000528336 TFEBP19484 476 aa6.44□□□□□ -1.38
PCF11-202ENST00000528336 TGM2P21980 687 aa6.44□□□□□ -1.38
PCF11-202ENST00000528336 CDK7P50613 346 aa6.44□□□□□ -1.38
PCF11-202ENST00000528336 CCDC96Q2M329 555 aa6.44□□□□□ -1.38
PCF11-202ENST00000528336 LRRC24Q50LG9 513 aa6.44□□□□□ -1.38
PCF11-202ENST00000528336 MORN5Q5VZ52 161 aa6.44□□□□□ -1.38
PCF11-202ENST00000528336 SUGP1Q8IWZ8 645 aaKnown RBP6.44□□□□□ -1.38
PCF11-202ENST00000528336 OR6Y1Q8NGX8 325 aa6.44□□□□□ -1.38
PCF11-202ENST00000528336 ABHD16BQ9H3Z7 469 aa6.44□□□□□ -1.38
PCF11-202ENST00000528336 MOV10Q9HCE1 1003 aaKnown RBP6.44□□□□□ -1.38
PCF11-202ENST00000528336 SAYSD1Q9NPB0 183 aa6.44□□□□□ -1.38
PCF11-202ENST00000528336 KIF17Q9P2E2 1029 aa6.44□□□□□ -1.38
PCF11-202ENST00000528336 RAPGEF2Q9Y4G8 1499 aa6.44□□□□□ -1.38
PCF11-202ENST00000528336 PCSK5Q92824 1860 aa6.43□□□□□ -1.38
PCF11-202ENST00000528336 LMTK3Q96Q04 1460 aa6.43□□□□□ -1.38
PCF11-202ENST00000528336 DHRS4L1P0CG22 281 aa6.43□□□□□ -1.38
PCF11-202ENST00000528336 CTSAP10619 480 aa6.43□□□□□ -1.38
PCF11-202ENST00000528336 PCP4P48539 62 aa6.43□□□□□ -1.38
PCF11-202ENST00000528336 AARSP49588 968 aaKnown RBP eCLIP6.43□□□□□ -1.38
PCF11-202ENST00000528336 RBM5P52756 815 aaKnown RBP eCLIP6.43□□□□□ -1.38
PCF11-202ENST00000528336 GEMIN4P57678 1058 aaKnown RBP6.43□□□□□ -1.38
PCF11-202ENST00000528336 RPS13P62277 151 aaKnown RBP6.43□□□□□ -1.38
PCF11-202ENST00000528336 SSBP2P81877 361 aaPredicted RBP6.43□□□□□ -1.38
PCF11-202ENST00000528336 ZNF474Q6S9Z5 364 aaPredicted RBP6.43□□□□□ -1.38
PCF11-202ENST00000528336 MOGAT3Q86VF5 341 aa6.43□□□□□ -1.38
PCF11-202ENST00000528336 ARL14EPQ8N8R7 260 aaPredicted RBP6.43□□□□□ -1.38
PCF11-202ENST00000528336 PPHLN1Q8NEY8 458 aaKnown RBP6.43□□□□□ -1.38
PCF11-202ENST00000528336 AFG1LQ8WV93 481 aa6.43□□□□□ -1.38
PCF11-202ENST00000528336 TRIM63Q969Q1 353 aa6.43□□□□□ -1.38
PCF11-202ENST00000528336 RILPL2Q969X0 211 aa6.43□□□□□ -1.38
PCF11-202ENST00000528336 VOPP1Q96AW1 172 aa6.43□□□□□ -1.38
PCF11-202ENST00000528336 PDE11AQ9HCR9 933 aa6.43□□□□□ -1.38
PCF11-202ENST00000528336 ITM2CQ9NQX7 267 aa6.43□□□□□ -1.38
PCF11-202ENST00000528336 FBXO2Q9UK22 296 aaPredicted RBP6.43□□□□□ -1.38
PCF11-202ENST00000528336 NOL7Q9UMY1 257 aaKnown RBP6.43□□□□□ -1.38
PCF11-202ENST00000528336 RCE1Q9Y256 329 aa6.43□□□□□ -1.38
PCF11-202ENST00000528336 BTBD3Q9Y2F9 522 aa6.43□□□□□ -1.38
PCF11-202ENST00000528336 PCDHGB3Q9Y5G1 929 aa6.43□□□□□ -1.38
PCF11-202ENST00000528336 CLASP1Q7Z460 1538 aa6.42□□□□□ -1.38
PCF11-202ENST00000528336 BICDL2A1A5D9 508 aa6.42□□□□□ -1.38
PCF11-202ENST00000528336 ADD2P35612 726 aa6.42□□□□□ -1.38
PCF11-202ENST00000528336 SLC12A2P55011 1212 aa6.42□□□□□ -1.38
PCF11-202ENST00000528336 ID2Q02363 134 aa6.42□□□□□ -1.38
PCF11-202ENST00000528336 KLF9Q13886 244 aaPredicted RBP6.42□□□□□ -1.38
PCF11-202ENST00000528336 TRIP6Q15654 476 aaKnown RBP6.42□□□□□ -1.38
PCF11-202ENST00000528336 ETFDHQ16134 617 aa6.42□□□□□ -1.38
PCF11-202ENST00000528336 DGAT2L7PQ6IED9 249 aa6.42□□□□□ -1.38
PCF11-202ENST00000528336 PDXDC1Q6P996 788 aa6.42□□□□□ -1.38
PCF11-202ENST00000528336 FAM57BQ71RH2 274 aa6.42□□□□□ -1.38
PCF11-202ENST00000528336 GET4Q7L5D6 327 aaPredicted RBP6.42□□□□□ -1.38
PCF11-202ENST00000528336 FAM47BQ8NA70 645 aa6.42□□□□□ -1.38
PCF11-202ENST00000528336 DENND1AQ8TEH3 1009 aa6.42□□□□□ -1.38
PCF11-202ENST00000528336 MPP4Q96JB8 637 aa6.42□□□□□ -1.38
PCF11-202ENST00000528336 ADAD1Q96M93 576 aaKnown RBP6.42□□□□□ -1.38
PCF11-202ENST00000528336 TTC14Q96N46 770 aa6.42□□□□□ -1.38
PCF11-202ENST00000528336 PIGSQ96S52 555 aa6.42□□□□□ -1.38
PCF11-202ENST00000528336 SERINC2Q96SA4 455 aa6.42□□□□□ -1.38
PCF11-202ENST00000528336 SPRTNQ9H040 489 aaPredicted RBP6.42□□□□□ -1.38
PCF11-202ENST00000528336 CHODLQ9H9P2 273 aa6.42□□□□□ -1.38
PCF11-202ENST00000528336 ERVK-5Q9HDB9 667 aa6.42□□□□□ -1.38
PCF11-202ENST00000528336 TMEM45AQ9NWC5 275 aa6.42□□□□□ -1.38
PCF11-202ENST00000528336 TRNAU1APQ9NX07 287 aaKnown RBP6.42□□□□□ -1.38
PCF11-202ENST00000528336 SLC8A2Q9UPR5 921 aa6.42□□□□□ -1.38
PCF11-202ENST00000528336 CEP170Q5SW79 1584 aa6.42□□□□□ -1.38
PCF11-202ENST00000528336 FAM90A20PA6NIJ5 464 aa6.41□□□□□ -1.38
PCF11-202ENST00000528336 GRM8O00222 908 aa6.41□□□□□ -1.38
PCF11-202ENST00000528336 SGPL1O95470 568 aa6.41□□□□□ -1.38
PCF11-202ENST00000528336 DDIT3P35638 169 aa6.41□□□□□ -1.38
PCF11-202ENST00000528336 B4GALNT1Q00973 533 aa6.41□□□□□ -1.38
PCF11-202ENST00000528336 ARL13AQ5H913 290 aaPredicted RBP6.41□□□□□ -1.38
PCF11-202ENST00000528336 ANKRD45Q5TZF3 282 aa6.41□□□□□ -1.38
PCF11-202ENST00000528336 LDHAL6AQ6ZMR3 332 aa6.41□□□□□ -1.38
PCF11-202ENST00000528336 ZNF793Q6ZN11 406 aa6.41□□□□□ -1.38
PCF11-202ENST00000528336 MMS22LQ6ZRQ5 1243 aa6.41□□□□□ -1.38
PCF11-202ENST00000528336 NANOGP1Q8N7R0 232 aa6.41□□□□□ -1.38
PCF11-202ENST00000528336 BCAS4Q8TDM0 211 aa6.41□□□□□ -1.38
PCF11-202ENST00000528336 ZFPM2Q8WW38 1151 aa6.41□□□□□ -1.38
PCF11-202ENST00000528336 KCNJ9Q92806 393 aa6.41□□□□□ -1.38
PCF11-202ENST00000528336 ATP2A3Q93084 1043 aa6.41□□□□□ -1.38
PCF11-202ENST00000528336 RPL36ALQ969Q0 106 aaKnown RBP6.41□□□□□ -1.38
PCF11-202ENST00000528336 ARRDC3Q96B67 414 aa6.41□□□□□ -1.38
PCF11-202ENST00000528336 SKA1Q96BD8 255 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms