RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 RABEPKQ7Z6M1 372 aa12.47□□□□□ -0.41
TRAPPC4-209ENST00000528230 SETD3Q86TU7 594 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC4-209ENST00000528230 LUZP1Q86V48 1076 aa12.47□□□□□ -0.41
TRAPPC4-209ENST00000528230 EMC1Q8N766 993 aa12.47□□□□□ -0.41
TRAPPC4-209ENST00000528230 CADM4Q8NFZ8 388 aa12.47□□□□□ -0.41
TRAPPC4-209ENST00000528230 CEP76Q8TAP6 659 aa12.47□□□□□ -0.41
TRAPPC4-209ENST00000528230 PIGKQ92643 395 aa12.47□□□□□ -0.41
TRAPPC4-209ENST00000528230 ALG14Q96F25 216 aa12.47□□□□□ -0.41
TRAPPC4-209ENST00000528230 FEM1AQ9BSK4 669 aa12.47□□□□□ -0.41
TRAPPC4-209ENST00000528230 SELENOOQ9BVL4 669 aa12.47□□□□□ -0.41
TRAPPC4-209ENST00000528230 TTYH3Q9C0H2 523 aa12.47□□□□□ -0.41
TRAPPC4-209ENST00000528230 PCED1AQ9H1Q7 454 aa12.47□□□□□ -0.41
TRAPPC4-209ENST00000528230 RSPH9Q9H1X1 276 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC4-209ENST00000528230 RETREG1Q9H6L5 497 aa12.47□□□□□ -0.41
TRAPPC4-209ENST00000528230 SEPT11Q9NVA2 429 aaKnown RBP12.47□□□□□ -0.41
TRAPPC4-209ENST00000528230 PILRBQ9UKJ0 227 aa12.47□□□□□ -0.41
TRAPPC4-209ENST00000528230 SCML1Q9UN30 329 aa12.47□□□□□ -0.41
TRAPPC4-209ENST00000528230 NYNRINQ9P2P1 1898 aaKnown RBP12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 SPTBN4Q9H254 2564 aa12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 EDDM13A0A1B0GTR0 161 aa12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 FAM170AA1A519 330 aa12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 LRRC53A6NM62 1247 aa12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 E9PAM4 449 aa12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 GDF9O60383 454 aa12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 GZMAP12544 262 aa12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 GPD1P21695 349 aa12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 MZF1P28698 734 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 RFC1P35251 1148 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 ADRA1BP35368 520 aa12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 IRAK1P51617 712 aa12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 UBASH3AP57075 661 aa12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 RPS14P62263 151 aaKnown RBP12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 ATP11AP98196 1134 aa12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 NRG1Q02297 640 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 SFSWAPQ12872 951 aaKnown RBP12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 ASIC2Q16515 512 aa12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 SYCP2LQ5T4T6 812 aa12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 ZNF776Q68DI1 518 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 SLC23A3Q6PIS1 610 aa12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 WDR59Q6PJI9 974 aa12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 DGLUCYQ7Z3D6 616 aa12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 PHLDB2Q86SQ0 1253 aa12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 CIR1Q86X95 450 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 FAM131BQ86XD5 332 aa12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 SLC41A1Q8IVJ1 513 aa12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 MCOLN2Q8IZK6 566 aa12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 ZNF366Q8N895 744 aa12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 JOSD2Q8TAC2 188 aa12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 IQCDQ96DY2 449 aa12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 TOE1Q96GM8 510 aaKnown RBP12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 OSBPL2Q9H1P3 480 aa12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 SMOC1Q9H4F8 434 aa12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 CD93Q9NPY3 652 aa12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 TMEM74BQ9NUR3 256 aa12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 PPARGC1AQ9UBK2 798 aaKnown RBP12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 SLCO3A1Q9UIG8 710 aa12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 OR51B4Q9Y5P0 310 aa12.46□□□□□ -0.41
TRAPPC4-209ENST00000528230 CEP250Q9BV73 2442 aa12.45□□□□□ -0.42
TRAPPC4-209ENST00000528230 A0A1W2PQJ5 194 aa12.45□□□□□ -0.42
TRAPPC4-209ENST00000528230 ANKRD62A6NC57 917 aa12.45□□□□□ -0.42
TRAPPC4-209ENST00000528230 RNASEH1O60930 286 aaKnown RBP12.45□□□□□ -0.42
TRAPPC4-209ENST00000528230 SIN3BO75182 1162 aa12.45□□□□□ -0.42
TRAPPC4-209ENST00000528230 CNTN5O94779 1100 aa12.45□□□□□ -0.42
TRAPPC4-209ENST00000528230 DNTTP04053 509 aa12.45□□□□□ -0.42
TRAPPC4-209ENST00000528230 ITPKAP23677 461 aa12.45□□□□□ -0.42
TRAPPC4-209ENST00000528230 GGCXP38435 758 aa12.45□□□□□ -0.42
TRAPPC4-209ENST00000528230 PBX1P40424 430 aa12.45□□□□□ -0.42
TRAPPC4-209ENST00000528230 CTSOP43234 321 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC4-209ENST00000528230 KRT83P78385 493 aa12.45□□□□□ -0.42
TRAPPC4-209ENST00000528230 DUOXA1Q1HG43 343 aa12.45□□□□□ -0.42
TRAPPC4-209ENST00000528230 C15orf59Q2T9L4 293 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC4-209ENST00000528230 TTC31Q49AM3 519 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC4-209ENST00000528230 ALFQ53S48 1182 aa12.45□□□□□ -0.42
TRAPPC4-209ENST00000528230 WDR45BQ5MNZ6 344 aa12.45□□□□□ -0.42
TRAPPC4-209ENST00000528230 ARTNQ5T4W7 220 aa12.45□□□□□ -0.42
TRAPPC4-209ENST00000528230 C9orf64Q5T6V5 341 aa12.45□□□□□ -0.42
TRAPPC4-209ENST00000528230 ZNF783Q6ZMS7 281 aa12.45□□□□□ -0.42
TRAPPC4-209ENST00000528230 USP30Q70CQ3 517 aa12.45□□□□□ -0.42
TRAPPC4-209ENST00000528230 ARMCX6Q7L4S7 300 aa12.45□□□□□ -0.42
TRAPPC4-209ENST00000528230 DNASE2BQ8WZ79 361 aa12.45□□□□□ -0.42
TRAPPC4-209ENST00000528230 SYN2Q92777 582 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC4-209ENST00000528230 PTPRN2Q92932 1015 aa12.45□□□□□ -0.42
TRAPPC4-209ENST00000528230 NTAN1Q96AB6 310 aa12.45□□□□□ -0.42
TRAPPC4-209ENST00000528230 RPL10LQ96L21 214 aaKnown RBP12.45□□□□□ -0.42
TRAPPC4-209ENST00000528230 NUSAP1Q9BXS6 441 aaKnown RBP12.45□□□□□ -0.42
TRAPPC4-209ENST00000528230 ZYG11BQ9C0D3 744 aa12.45□□□□□ -0.42
TRAPPC4-209ENST00000528230 HAUS4Q9H6D7 363 aa12.45□□□□□ -0.42
TRAPPC4-209ENST00000528230 BZW2Q9Y6E2 419 aaKnown RBP12.45□□□□□ -0.42
TRAPPC4-209ENST00000528230 CHD5Q8TDI0 1954 aa12.45□□□□□ -0.42
TRAPPC4-209ENST00000528230 FRYLO94915 3013 aa12.45□□□□□ -0.42
TRAPPC4-209ENST00000528230 METTL12A8MUP2 240 aa12.44□□□□□ -0.42
TRAPPC4-209ENST00000528230 TTC34A8MYJ7 566 aa12.44□□□□□ -0.42
TRAPPC4-209ENST00000528230 TM4SF5O14894 197 aa12.44□□□□□ -0.42
TRAPPC4-209ENST00000528230 ATP9BO43861 1147 aa12.44□□□□□ -0.42
TRAPPC4-209ENST00000528230 SRGAP2O75044 1071 aa12.44□□□□□ -0.42
TRAPPC4-209ENST00000528230 GJB6O95452 261 aa12.44□□□□□ -0.42
TRAPPC4-209ENST00000528230 RHOCP08134 193 aa12.44□□□□□ -0.42
TRAPPC4-209ENST00000528230 ZNF143P52747 638 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC4-209ENST00000528230 HDAC4P56524 1084 aa12.44□□□□□ -0.42
TRAPPC4-209ENST00000528230 IRX4P78413 519 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms