RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 CASP8AP2Q9UKL3 1982 aa15.7■□□□□ 0.1
USH1C-207ENST00000527720 CCDC195A0A1B0GUA6 201 aa15.7■□□□□ 0.1
USH1C-207ENST00000527720 B3GAT3O94766 335 aa15.7■□□□□ 0.1
USH1C-207ENST00000527720 PGK1P00558 417 aa15.7■□□□□ 0.1
USH1C-207ENST00000527720 ESRRAP11474 423 aaPredicted RBP15.7■□□□□ 0.1
USH1C-207ENST00000527720 BDNFP23560 247 aa15.7■□□□□ 0.1
USH1C-207ENST00000527720 CCNG1P51959 295 aa15.7■□□□□ 0.1
USH1C-207ENST00000527720 TUSC3Q13454 348 aa15.7■□□□□ 0.1
USH1C-207ENST00000527720 EIF4EBP2Q13542 120 aaPredicted RBP15.7■□□□□ 0.1
USH1C-207ENST00000527720 PRPSAP1Q14558 356 aa15.7■□□□□ 0.1
USH1C-207ENST00000527720 DNAAF3Q8N9W5 541 aa15.7■□□□□ 0.1
USH1C-207ENST00000527720 PPP1R14CQ8TAE6 165 aa15.7■□□□□ 0.1
USH1C-207ENST00000527720 ZNF669Q96BR6 464 aaPredicted RBP15.7■□□□□ 0.1
USH1C-207ENST00000527720 FCRL3Q96P31 734 aaPredicted RBP15.7■□□□□ 0.1
USH1C-207ENST00000527720 AGAP3Q96P47 875 aa15.7■□□□□ 0.1
USH1C-207ENST00000527720 TSGA13Q96PP4 275 aa15.7■□□□□ 0.1
USH1C-207ENST00000527720 IL22Q9GZX6 179 aa15.7■□□□□ 0.1
USH1C-207ENST00000527720 MMADHCQ9H3L0 296 aaPredicted RBP15.7■□□□□ 0.1
USH1C-207ENST00000527720 FAM96AQ9H5X1 160 aa15.7■□□□□ 0.1
USH1C-207ENST00000527720 RNPEPL1Q9HAU8 725 aa15.7■□□□□ 0.1
USH1C-207ENST00000527720 SLC17A6Q9P2U8 582 aa15.7■□□□□ 0.1
USH1C-207ENST00000527720 SORCS3Q9UPU3 1222 aa15.7■□□□□ 0.1
USH1C-207ENST00000527720 SEPT4O43236 478 aa15.69■□□□□ 0.1
USH1C-207ENST00000527720 LMNAP02545 664 aaKnown RBP15.69■□□□□ 0.1
USH1C-207ENST00000527720 ERVK-10P10266 1014 aa15.69■□□□□ 0.1
USH1C-207ENST00000527720 GRK2P25098 689 aa15.69■□□□□ 0.1
USH1C-207ENST00000527720 TYK2P29597 1187 aa15.69■□□□□ 0.1
USH1C-207ENST00000527720 CCDC153Q494R4 210 aa15.69■□□□□ 0.1
USH1C-207ENST00000527720 BRMS1LQ5PSV4 323 aa15.69■□□□□ 0.1
USH1C-207ENST00000527720 NAPEPLDQ6IQ20 393 aa15.69■□□□□ 0.1
USH1C-207ENST00000527720 WDR75Q8IWA0 830 aaKnown RBP15.69■□□□□ 0.1
USH1C-207ENST00000527720 THEM5Q8N1Q8 247 aa15.69■□□□□ 0.1
USH1C-207ENST00000527720 DQX1Q8TE96 717 aaKnown RBP15.69■□□□□ 0.1
USH1C-207ENST00000527720 ANKRD27Q96NW4 1050 aa15.69■□□□□ 0.1
USH1C-207ENST00000527720 MIPEPQ99797 713 aa15.69■□□□□ 0.1
USH1C-207ENST00000527720 MLPHQ9BV36 600 aaPredicted RBP15.69■□□□□ 0.1
USH1C-207ENST00000527720 CADM1Q9BY67 442 aaKnown RBP15.69■□□□□ 0.1
USH1C-207ENST00000527720 ARHGEF38Q9NXL2 777 aa15.69■□□□□ 0.1
USH1C-207ENST00000527720 ZCWPW2A0A1B0GU75 182 aa15.69■□□□□ 0.1
USH1C-207ENST00000527720 GYG2O15488 501 aa15.69■□□□□ 0.1
USH1C-207ENST00000527720 CACNG3O60359 315 aa15.69■□□□□ 0.1
USH1C-207ENST00000527720 SLC10A3P09131 477 aa15.69■□□□□ 0.1
USH1C-207ENST00000527720 FGF3P11487 239 aaPredicted RBP15.69■□□□□ 0.1
USH1C-207ENST00000527720 NFKB1P19838 968 aa15.69■□□□□ 0.1
USH1C-207ENST00000527720 CTGFP29279 349 aa15.69■□□□□ 0.1
USH1C-207ENST00000527720 CD52P31358 61 aa15.69■□□□□ 0.1
USH1C-207ENST00000527720 THPOP40225 353 aa15.69■□□□□ 0.1
USH1C-207ENST00000527720 SERPINB8P50452 374 aa15.69■□□□□ 0.1
USH1C-207ENST00000527720 CDK7P50613 346 aa15.69■□□□□ 0.1
USH1C-207ENST00000527720 LIMK2P53671 638 aa15.69■□□□□ 0.1
USH1C-207ENST00000527720 ZBTB17Q13105 803 aa15.69■□□□□ 0.1
USH1C-207ENST00000527720 CRHR2Q13324 411 aa15.69■□□□□ 0.1
USH1C-207ENST00000527720 ANKRD20A4Q4UJ75 823 aa15.69■□□□□ 0.1
USH1C-207ENST00000527720 CD300LGQ6UXG3 332 aa15.69■□□□□ 0.1
USH1C-207ENST00000527720 CTU1Q7Z7A3 348 aaKnown RBP15.69■□□□□ 0.1
USH1C-207ENST00000527720 LINC00523Q86TU6 105 aa15.69■□□□□ 0.1
USH1C-207ENST00000527720 ENDOVQ8N8Q3 282 aaKnown RBP15.69■□□□□ 0.1
USH1C-207ENST00000527720 RNF34Q969K3 372 aa15.69■□□□□ 0.1
USH1C-207ENST00000527720 HAPLN3Q96S86 360 aa15.69■□□□□ 0.1
USH1C-207ENST00000527720 RHOBTB2Q9BYZ6 727 aa15.69■□□□□ 0.1
USH1C-207ENST00000527720 NMUR2Q9GZQ4 415 aa15.69■□□□□ 0.1
USH1C-207ENST00000527720 ARHGAP42A6NI28 874 aa15.68■□□□□ 0.1
USH1C-207ENST00000527720 CAPN14A8MX76 684 aa15.68■□□□□ 0.1
USH1C-207ENST00000527720 GSC2O15499 205 aa15.68■□□□□ 0.1
USH1C-207ENST00000527720 MGEA5O60502 916 aa15.68■□□□□ 0.1
USH1C-207ENST00000527720 PEX11AO75192 247 aa15.68■□□□□ 0.1
USH1C-207ENST00000527720 POMCP01189 267 aa15.68■□□□□ 0.1
USH1C-207ENST00000527720 PROCP04070 461 aa15.68■□□□□ 0.1
USH1C-207ENST00000527720 SERPINE1P05121 402 aa15.68■□□□□ 0.1
USH1C-207ENST00000527720 TYMPP19971 482 aa15.68■□□□□ 0.1
USH1C-207ENST00000527720 CCNCP24863 283 aa15.68■□□□□ 0.1
USH1C-207ENST00000527720 CSE1LP55060 971 aaKnown RBP15.68■□□□□ 0.1
USH1C-207ENST00000527720 AQP5P55064 265 aa15.68■□□□□ 0.1
USH1C-207ENST00000527720 TSPY1Q01534 308 aa15.68■□□□□ 0.1
USH1C-207ENST00000527720 PCLAFQ15004 111 aa15.68■□□□□ 0.1
USH1C-207ENST00000527720 HSF5Q4G112 596 aaPredicted RBP15.68■□□□□ 0.1
USH1C-207ENST00000527720 ZSCAN18Q8TBC5 510 aaPredicted RBP15.68■□□□□ 0.1
USH1C-207ENST00000527720 PIWIL2Q8TC59 973 aaKnown RBP15.68■□□□□ 0.1
USH1C-207ENST00000527720 RSPH1Q8WYR4 309 aa15.68■□□□□ 0.1
USH1C-207ENST00000527720 TRIB2Q92519 343 aa15.68■□□□□ 0.1
USH1C-207ENST00000527720 C20orf27Q9GZN8 174 aa15.68■□□□□ 0.1
USH1C-207ENST00000527720 ABCC13Q9NSE7 274 aa15.68■□□□□ 0.1
USH1C-207ENST00000527720 NSMCE4AQ9NXX6 385 aa15.68■□□□□ 0.1
USH1C-207ENST00000527720 SOX13Q9UN79 622 aa15.68■□□□□ 0.1
USH1C-207ENST00000527720 FRMPD3Q5JV73 1810 aa15.68■□□□□ 0.1
USH1C-207ENST00000527720 ADAMTS4O75173 837 aa15.68■□□□□ 0.1
USH1C-207ENST00000527720 TOP3BO95985 862 aaKnown RBP15.68■□□□□ 0.1
USH1C-207ENST00000527720 MPOP05164 745 aa15.68■□□□□ 0.1
USH1C-207ENST00000527720 HOXC13P31276 330 aa15.68■□□□□ 0.1
USH1C-207ENST00000527720 MAP2K2P36507 400 aa15.68■□□□□ 0.1
USH1C-207ENST00000527720 HADHAP40939 763 aa15.68■□□□□ 0.1
USH1C-207ENST00000527720 BRCC3P46736 316 aa15.68■□□□□ 0.1
USH1C-207ENST00000527720 SREBF2Q12772 1141 aa15.68■□□□□ 0.1
USH1C-207ENST00000527720 CDH17Q12864 832 aa15.68■□□□□ 0.1
USH1C-207ENST00000527720 TEDDM1Q5T9Z0 273 aa15.68■□□□□ 0.1
USH1C-207ENST00000527720 OVOS1Q6IE37 1185 aa15.68■□□□□ 0.1
USH1C-207ENST00000527720 C4orf50Q6ZRC1 276 aa15.68■□□□□ 0.1
USH1C-207ENST00000527720 TTC7BQ86TV6 843 aa15.68■□□□□ 0.1
USH1C-207ENST00000527720 ALYREFQ86V81 257 aaKnown RBP15.68■□□□□ 0.1
USH1C-207ENST00000527720 ARHGAP24Q8N264 748 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms