RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 SYT12Q8IV01 421 aa27.13■■□□□ 1.93
TSPAN4-217ENST00000527644 CENPIQ92674 756 aaPredicted RBP27.13■■□□□ 1.93
TSPAN4-217ENST00000527644 WSB2Q9NYS7 404 aaPredicted RBP27.13■■□□□ 1.93
TSPAN4-217ENST00000527644 GON4LQ3T8J9 2241 aa27.12■■□□□ 1.93
TSPAN4-217ENST00000527644 IGLV3-10A0A075B6K4 115 aa27.12■■□□□ 1.93
TSPAN4-217ENST00000527644 TCRBV5S1A1TA0A578 114 aa27.12■■□□□ 1.93
TSPAN4-217ENST00000527644 GDF9O60383 454 aa27.12■■□□□ 1.93
TSPAN4-217ENST00000527644 CNTN5O94779 1100 aa27.12■■□□□ 1.93
TSPAN4-217ENST00000527644 GPD1P21695 349 aa27.12■■□□□ 1.93
TSPAN4-217ENST00000527644 NNMTP40261 264 aa27.12■■□□□ 1.93
TSPAN4-217ENST00000527644 PRKCIP41743 596 aa27.12■■□□□ 1.93
TSPAN4-217ENST00000527644 ZNF33AQ06730 810 aa27.12■■□□□ 1.93
TSPAN4-217ENST00000527644 ARL13BQ3SXY8 428 aa27.12■■□□□ 1.93
TSPAN4-217ENST00000527644 DNAJC24Q6P3W2 148 aa27.12■■□□□ 1.93
TSPAN4-217ENST00000527644 WDR59Q6PJI9 974 aa27.12■■□□□ 1.93
TSPAN4-217ENST00000527644 MCOLN2Q8IZK6 566 aa27.12■■□□□ 1.93
TSPAN4-217ENST00000527644 DEFB119Q8N690 84 aa27.12■■□□□ 1.93
TSPAN4-217ENST00000527644 ALG14Q96F25 216 aa27.12■■□□□ 1.93
TSPAN4-217ENST00000527644 TOE1Q96GM8 510 aaKnown RBP27.12■■□□□ 1.93
TSPAN4-217ENST00000527644 ZNF419Q96HQ0 510 aaPredicted RBP27.12■■□□□ 1.93
TSPAN4-217ENST00000527644 VCPIP1Q96JH7 1222 aa27.12■■□□□ 1.93
TSPAN4-217ENST00000527644 FEM1AQ9BSK4 669 aa27.12■■□□□ 1.93
TSPAN4-217ENST00000527644 HAUS4Q9H6D7 363 aa27.12■■□□□ 1.93
TSPAN4-217ENST00000527644 SLCO3A1Q9UIG8 710 aa27.12■■□□□ 1.93
TSPAN4-217ENST00000527644 ITIH6Q6UXX5 1313 aa27.12■■□□□ 1.93
TSPAN4-217ENST00000527644 TARSL2A2RTX5 802 aaKnown RBP27.11■■□□□ 1.93
TSPAN4-217ENST00000527644 E9PAM4 449 aa27.11■■□□□ 1.93
TSPAN4-217ENST00000527644 KHNYNO15037 678 aaKnown RBP27.11■■□□□ 1.93
TSPAN4-217ENST00000527644 HOXD12P35452 270 aa27.11■■□□□ 1.93
TSPAN4-217ENST00000527644 PBX1P40424 430 aa27.11■■□□□ 1.93
TSPAN4-217ENST00000527644 RPS14P62263 151 aaKnown RBP27.11■■□□□ 1.93
TSPAN4-217ENST00000527644 ALFQ53S48 1182 aa27.11■■□□□ 1.93
TSPAN4-217ENST00000527644 SH3PXD2AQ5TCZ1 1133 aa27.11■■□□□ 1.93
TSPAN4-217ENST00000527644 CACUL1Q86Y37 369 aa27.11■■□□□ 1.93
TSPAN4-217ENST00000527644 FOXJ1Q92949 421 aa27.11■■□□□ 1.93
TSPAN4-217ENST00000527644 RPL10LQ96L21 214 aaKnown RBP27.11■■□□□ 1.93
TSPAN4-217ENST00000527644 RTKNQ9BST9 563 aa27.11■■□□□ 1.93
TSPAN4-217ENST00000527644 MTG2Q9H4K7 406 aa27.11■■□□□ 1.93
TSPAN4-217ENST00000527644 PILRBQ9UKJ0 227 aa27.11■■□□□ 1.93
TSPAN4-217ENST00000527644 OR51B4Q9Y5P0 310 aa27.11■■□□□ 1.93
TSPAN4-217ENST00000527644 DCHS1Q96JQ0 3298 aa27.1■■□□□ 1.93
TSPAN4-217ENST00000527644 EDDM13A0A1B0GTR0 161 aa27.1■■□□□ 1.93
TSPAN4-217ENST00000527644 ANKRD62A6NC57 917 aa27.1■■□□□ 1.93
TSPAN4-217ENST00000527644 TTC34A8MYJ7 566 aa27.1■■□□□ 1.93
TSPAN4-217ENST00000527644 SIN3BO75182 1162 aa27.1■■□□□ 1.93
TSPAN4-217ENST00000527644 ITPKAP23677 461 aa27.1■■□□□ 1.93
TSPAN4-217ENST00000527644 ADRA1BP35368 520 aa27.1■■□□□ 1.93
TSPAN4-217ENST00000527644 VASPP50552 380 aaPredicted RBP27.1■■□□□ 1.93
TSPAN4-217ENST00000527644 LIMK1P53667 647 aa27.1■■□□□ 1.93
TSPAN4-217ENST00000527644 KLHL30Q0D2K2 578 aa27.1■■□□□ 1.93
TSPAN4-217ENST00000527644 RAB6CQ53S08 254 aa27.1■■□□□ 1.93
TSPAN4-217ENST00000527644 PEAR1Q5VY43 1037 aaPredicted RBP27.1■■□□□ 1.93
TSPAN4-217ENST00000527644 E4F1Q66K89 784 aaPredicted RBP27.1■■□□□ 1.93
TSPAN4-217ENST00000527644 ZNF776Q68DI1 518 aaPredicted RBP27.1■■□□□ 1.93
TSPAN4-217ENST00000527644 TCEAL6Q6IPX3 200 aa27.1■■□□□ 1.93
TSPAN4-217ENST00000527644 SETD3Q86TU7 594 aaPredicted RBP27.1■■□□□ 1.93
TSPAN4-217ENST00000527644 SLC41A1Q8IVJ1 513 aa27.1■■□□□ 1.93
TSPAN4-217ENST00000527644 OR52K2Q8NGK3 314 aa27.1■■□□□ 1.93
TSPAN4-217ENST00000527644 FAM172AQ8WUF8 416 aa27.1■■□□□ 1.93
TSPAN4-217ENST00000527644 TCEAL3Q969E4 200 aa27.1■■□□□ 1.93
TSPAN4-217ENST00000527644 RAB6CQ9H0N0 254 aa27.1■■□□□ 1.93
TSPAN4-217ENST00000527644 RSPH9Q9H1X1 276 aaPredicted RBP27.1■■□□□ 1.93
TSPAN4-217ENST00000527644 TMEM74BQ9NUR3 256 aa27.1■■□□□ 1.93
TSPAN4-217ENST00000527644 TAS2R14Q9NYV8 317 aa27.1■■□□□ 1.93
TSPAN4-217ENST00000527644 EVLQ9UI08 416 aaPredicted RBP27.1■■□□□ 1.93
TSPAN4-217ENST00000527644 CEP192Q8TEP8 1941 aa27.1■■□□□ 1.93
TSPAN4-217ENST00000527644 TNRC6BQ9UPQ9 1833 aaKnown RBP27.09■■□□□ 1.93
TSPAN4-217ENST00000527644 A0A1W2PQJ5 194 aa27.09■■□□□ 1.93
TSPAN4-217ENST00000527644 SLC30A4O14863 429 aa27.09■■□□□ 1.93
TSPAN4-217ENST00000527644 RNASEH1O60930 286 aaKnown RBP27.09■■□□□ 1.93
TSPAN4-217ENST00000527644 SRGAP2O75044 1071 aa27.09■■□□□ 1.93
TSPAN4-217ENST00000527644 DNTTP04053 509 aa27.09■■□□□ 1.93
TSPAN4-217ENST00000527644 PPP1R15BQ5SWA1 713 aa27.09■■□□□ 1.93
TSPAN4-217ENST00000527644 C9orf64Q5T6V5 341 aa27.09■■□□□ 1.93
TSPAN4-217ENST00000527644 ZNF571Q7Z3V5 609 aaPredicted RBP27.09■■□□□ 1.93
TSPAN4-217ENST00000527644 CADM4Q8NFZ8 388 aa27.09■■□□□ 1.93
TSPAN4-217ENST00000527644 IQCDQ96DY2 449 aa27.09■■□□□ 1.93
TSPAN4-217ENST00000527644 HSPA12BQ96MM6 686 aa27.09■■□□□ 1.93
TSPAN4-217ENST00000527644 MUC3BQ9H195 1237 aa27.09■■□□□ 1.93
TSPAN4-217ENST00000527644 OSBPL2Q9H1P3 480 aa27.09■■□□□ 1.93
TSPAN4-217ENST00000527644 RXFP3Q9NSD7 469 aa27.09■■□□□ 1.93
TSPAN4-217ENST00000527644 MPP6Q9NZW5 540 aa27.09■■□□□ 1.93
TSPAN4-217ENST00000527644 PPARGC1AQ9UBK2 798 aaKnown RBP27.09■■□□□ 1.93
TSPAN4-217ENST00000527644 VPS28Q9UK41 221 aa27.09■■□□□ 1.93
TSPAN4-217ENST00000527644 RHOCP08134 193 aa27.08■■□□□ 1.93
TSPAN4-217ENST00000527644 GZMAP12544 262 aa27.08■■□□□ 1.93
TSPAN4-217ENST00000527644 RRM1P23921 792 aa27.08■■□□□ 1.93
TSPAN4-217ENST00000527644 STK19P49842 368 aaPredicted RBP27.08■■□□□ 1.93
TSPAN4-217ENST00000527644 ZNF143P52747 638 aaPredicted RBP27.08■■□□□ 1.93
TSPAN4-217ENST00000527644 HDAC4P56524 1084 aa27.08■■□□□ 1.93
TSPAN4-217ENST00000527644 NRG1Q02297 640 aaPredicted RBP27.08■■□□□ 1.93
TSPAN4-217ENST00000527644 SYCP2LQ5T4T6 812 aa27.08■■□□□ 1.93
TSPAN4-217ENST00000527644 ARTNQ5T4W7 220 aa27.08■■□□□ 1.93
TSPAN4-217ENST00000527644 C6orf118Q5T5N4 469 aa27.08■■□□□ 1.93
TSPAN4-217ENST00000527644 ERMP1Q7Z2K6 904 aa27.08■■□□□ 1.93
TSPAN4-217ENST00000527644 MCEEQ96PE7 176 aa27.08■■□□□ 1.93
TSPAN4-217ENST00000527644 GPR174Q9BXC1 333 aa27.08■■□□□ 1.93
TSPAN4-217ENST00000527644 ZYG11BQ9C0D3 744 aa27.08■■□□□ 1.93
TSPAN4-217ENST00000527644 OR12D3Q9UGF7 316 aa27.08■■□□□ 1.93
TSPAN4-217ENST00000527644 SLC25A13Q9UJS0 675 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms