RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 TRIM49D1C9J1S8 452 aa17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 TBX18O95935 607 aa17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 GSTA2P09210 222 aa17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 NFKB1P19838 968 aa17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 TUBP50607 506 aa17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 ELF3P78545 371 aaPredicted RBP17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 EFEMP1Q12805 493 aa17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 BNIP1Q12981 228 aa17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 BMPR2Q13873 1038 aa17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 RNF43Q68DV7 783 aa17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 C14orf80Q86SX3 495 aa17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 FITM2Q8N6M3 262 aa17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 TCP10LQ8TDR4 215 aa17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 ARNTL2Q8WYA1 636 aa17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 TBC1D31Q96DN5 1066 aa17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 RMDN2Q96LZ7 410 aa17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 GBA3Q9H227 469 aa17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 SSU72Q9NP77 194 aaKnown RBP17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 MPP6Q9NZW5 540 aa17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 SLC17A7Q9P2U7 560 aa17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 SLC17A6Q9P2U8 582 aa17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 NUP205Q92621 2012 aa17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 KCNU1A8MYU2 1149 aa17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 CHUKO15111 745 aa17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 MTSS1O43312 755 aa17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 VNN2O95498 520 aa17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 PYGBP11216 843 aa17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 ADRA1DP25100 572 aa17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 MGAT5Q09328 741 aa17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 SNCBQ16143 134 aa17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 PDK4Q16654 411 aa17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 TEX44Q53QW1 395 aa17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 MANEALQ5VSG8 457 aa17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 TTC39BQ5VTQ0 682 aaPredicted RBP17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 ARHGAP12Q8IWW6 846 aa17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 FBXO32Q969P5 355 aa17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 MRPL9Q9BYD2 267 aaKnown RBP17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 UBP1Q9NZI7 540 aa17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 OGDHLQ9ULD0 1010 aa17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 STARD13Q9Y3M8 1113 aa17.7■□□□□ 0.42
PCDHA6-202ENST00000527624 SCN5AQ14524 2016 aa17.69■□□□□ 0.42
PCDHA6-202ENST00000527624 FAM159BA6NKW6 160 aa17.69■□□□□ 0.42
PCDHA6-202ENST00000527624 E9PAM4 449 aa17.69■□□□□ 0.42
PCDHA6-202ENST00000527624 HOXA2O43364 376 aa17.69■□□□□ 0.42
PCDHA6-202ENST00000527624 YWHAQP27348 245 aa17.69■□□□□ 0.42
PCDHA6-202ENST00000527624 NCALDP61601 193 aa17.69■□□□□ 0.42
PCDHA6-202ENST00000527624 DNAJC3Q13217 504 aa17.69■□□□□ 0.42
PCDHA6-202ENST00000527624 SEPT7Q16181 437 aaKnown RBP17.69■□□□□ 0.42
PCDHA6-202ENST00000527624 ARTNQ5T4W7 220 aa17.69■□□□□ 0.42
PCDHA6-202ENST00000527624 CES3Q6UWW8 571 aa17.69■□□□□ 0.42
PCDHA6-202ENST00000527624 MIB1Q86YT6 1006 aa17.69■□□□□ 0.42
PCDHA6-202ENST00000527624 APOL2Q9BQE5 337 aa17.69■□□□□ 0.42
PCDHA6-202ENST00000527624 MLPHQ9BV36 600 aaPredicted RBP17.69■□□□□ 0.42
PCDHA6-202ENST00000527624 MAGED2Q9UNF1 606 aaPredicted RBP17.69■□□□□ 0.42
PCDHA6-202ENST00000527624 TLR6Q9Y2C9 796 aa17.69■□□□□ 0.42
PCDHA6-202ENST00000527624 ARHGAP42A6NI28 874 aa17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 ZWINTO95229 277 aa17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 AP2A1O95782 977 aa17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 TAF10Q12962 218 aa17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 DUSP4Q13115 394 aa17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 GPR17Q13304 367 aa17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 PIK3R6Q5UE93 754 aa17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 ATPAF2Q8N5M1 289 aa17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 OXNAD1Q96HP4 312 aaPredicted RBP17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 TTPALQ9BTX7 342 aa17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 CATSPERBQ9H7T0 1116 aa17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 ECT2Q9H8V3 914 aa17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 CD248Q9HCU0 757 aa17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 MOCS1Q9NZB8 636 aa17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 IL1RAPL1Q9NZN1 696 aa17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 TRHDEQ9UKU6 1024 aa17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 WDR91A4D1P6 747 aa17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 FGF10O15520 208 aaPredicted RBP17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 LPXNO60711 386 aa17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 KRT37O76014 449 aa17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 PGAM1P18669 254 aa17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 HOXC13P31276 330 aa17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 TBX4P57082 545 aa17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 CRYMQ14894 314 aa17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 TRIM60Q495X7 471 aa17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 STEAP4Q687X5 459 aa17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 MSANTD2Q6P1R3 559 aa17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 OTOP3Q7RTS5 596 aa17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 TBC1D1Q86TI0 1168 aaPredicted RBP17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 LRRC43Q8N309 656 aa17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 ARHGAP18Q8N392 663 aa17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 ZSCAN18Q8TBC5 510 aaPredicted RBP17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 GIPC2Q8TF65 315 aa17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 DPF3Q92784 378 aa17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 TEKT5Q96M29 485 aa17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 SLC39A8Q9C0K1 460 aa17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 ZNF180Q9UJW8 692 aa17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 VANGL2Q9ULK5 521 aa17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 PHTF1Q9UMS5 762 aa17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 CDY1Q9Y6F8 540 aa17.68■□□□□ 0.42
PCDHA6-202ENST00000527624 ZNF189O75820 626 aaPredicted RBP17.67■□□□□ 0.42
PCDHA6-202ENST00000527624 HMBSP08397 361 aa17.67■□□□□ 0.42
PCDHA6-202ENST00000527624 SNRPAP09012 282 aaKnown RBP17.67■□□□□ 0.42
PCDHA6-202ENST00000527624 RPL17P18621 184 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms