RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 CNGB3Q9NQW8 809 aa13.46□□□□□ -0.25
CLNS1A-207ENST00000527133 RAB20Q9NX57 234 aa13.46□□□□□ -0.25
CLNS1A-207ENST00000527133 ARHGAP20Q9P2F6 1191 aa13.46□□□□□ -0.25
CLNS1A-207ENST00000527133 CYTH4Q9UIA0 394 aa13.46□□□□□ -0.25
CLNS1A-207ENST00000527133 MAPK8IP1Q9UQF2 711 aa13.46□□□□□ -0.25
CLNS1A-207ENST00000527133 B8ZZF3 427 aa13.45□□□□□ -0.26
CLNS1A-207ENST00000527133 KLK10O43240 276 aa13.45□□□□□ -0.26
CLNS1A-207ENST00000527133 MAGEC1O60732 1142 aa13.45□□□□□ -0.26
CLNS1A-207ENST00000527133 RTN2O75298 545 aa13.45□□□□□ -0.26
CLNS1A-207ENST00000527133 MOCS3O95396 460 aa13.45□□□□□ -0.26
CLNS1A-207ENST00000527133 C6P13671 934 aa13.45□□□□□ -0.26
CLNS1A-207ENST00000527133 VAV1P15498 845 aa13.45□□□□□ -0.26
CLNS1A-207ENST00000527133 RGS7P49802 495 aa13.45□□□□□ -0.26
CLNS1A-207ENST00000527133 STK19P49842 368 aaPredicted RBP13.45□□□□□ -0.26
CLNS1A-207ENST00000527133 ELAVL3Q14576 367 aaKnown RBP13.45□□□□□ -0.26
CLNS1A-207ENST00000527133 STAT4Q14765 748 aa13.45□□□□□ -0.26
CLNS1A-207ENST00000527133 NFIL3Q16649 462 aa13.45□□□□□ -0.26
CLNS1A-207ENST00000527133 HS1BP3Q53T59 392 aa13.45□□□□□ -0.26
CLNS1A-207ENST00000527133 TMC6Q7Z403 805 aa13.45□□□□□ -0.26
CLNS1A-207ENST00000527133 APCDD1Q8J025 514 aa13.45□□□□□ -0.26
CLNS1A-207ENST00000527133 SLC25A45Q8N413 288 aa13.45□□□□□ -0.26
CLNS1A-207ENST00000527133 KCNE4Q8WWG9 221 aa13.45□□□□□ -0.26
CLNS1A-207ENST00000527133 KCTD13Q8WZ19 329 aa13.45□□□□□ -0.26
CLNS1A-207ENST00000527133 PTPRN2Q92932 1015 aa13.45□□□□□ -0.26
CLNS1A-207ENST00000527133 DMTF1Q9Y222 760 aa13.45□□□□□ -0.26
CLNS1A-207ENST00000527133 CA5BQ9Y2D0 317 aa13.45□□□□□ -0.26
CLNS1A-207ENST00000527133 NYNRINQ9P2P1 1898 aaKnown RBP13.44□□□□□ -0.26
CLNS1A-207ENST00000527133 O00370 1275 aa13.44□□□□□ -0.26
CLNS1A-207ENST00000527133 FFAR2O15552 330 aa13.44□□□□□ -0.26
CLNS1A-207ENST00000527133 ARHGAP6O43182 974 aa13.44□□□□□ -0.26
CLNS1A-207ENST00000527133 OPA1O60313 960 aa13.44□□□□□ -0.26
CLNS1A-207ENST00000527133 USP12O75317 370 aa13.44□□□□□ -0.26
CLNS1A-207ENST00000527133 LUC7L3O95232 432 aaKnown RBP13.44□□□□□ -0.26
CLNS1A-207ENST00000527133 SETSIPP0DME0 302 aa13.44□□□□□ -0.26
CLNS1A-207ENST00000527133 DGKAP23743 735 aa13.44□□□□□ -0.26
CLNS1A-207ENST00000527133 RPL13P26373 211 aaKnown RBP13.44□□□□□ -0.26
CLNS1A-207ENST00000527133 KCNC4Q03721 635 aa13.44□□□□□ -0.26
CLNS1A-207ENST00000527133 OVGP1Q12889 678 aa13.44□□□□□ -0.26
CLNS1A-207ENST00000527133 ADAM9Q13443 819 aa13.44□□□□□ -0.26
CLNS1A-207ENST00000527133 POM121L1PQ3SYA9 428 aa13.44□□□□□ -0.26
CLNS1A-207ENST00000527133 DCAF6Q58WW2 860 aa13.44□□□□□ -0.26
CLNS1A-207ENST00000527133 MS4A13Q5J8X5 152 aa13.44□□□□□ -0.26
CLNS1A-207ENST00000527133 LSMEM2Q8N112 164 aa13.44□□□□□ -0.26
CLNS1A-207ENST00000527133 SCML4Q8N228 414 aa13.44□□□□□ -0.26
CLNS1A-207ENST00000527133 OR4C6Q8NH72 309 aa13.44□□□□□ -0.26
CLNS1A-207ENST00000527133 CLEC4CQ8WTT0 213 aa13.44□□□□□ -0.26
CLNS1A-207ENST00000527133 TTC9Q92623 222 aa13.44□□□□□ -0.26
CLNS1A-207ENST00000527133 AZIN2Q96A70 460 aa13.44□□□□□ -0.26
CLNS1A-207ENST00000527133 EEF2KMTQ96G04 330 aa13.44□□□□□ -0.26
CLNS1A-207ENST00000527133 FCRL2Q96LA5 508 aaPredicted RBP13.44□□□□□ -0.26
CLNS1A-207ENST00000527133 DEPDC7Q96QD5 511 aa13.44□□□□□ -0.26
CLNS1A-207ENST00000527133 UCKL1Q9NWZ5 548 aa13.44□□□□□ -0.26
CLNS1A-207ENST00000527133 A0A1B0GVM2 712 aa13.43□□□□□ -0.26
CLNS1A-207ENST00000527133 PLRG1O43660 514 aaKnown RBP13.43□□□□□ -0.26
CLNS1A-207ENST00000527133 CSO75390 466 aaKnown RBP13.43□□□□□ -0.26
CLNS1A-207ENST00000527133 GABBR2O75899 941 aa13.43□□□□□ -0.26
CLNS1A-207ENST00000527133 DXOO77932 396 aaKnown RBP13.43□□□□□ -0.26
CLNS1A-207ENST00000527133 MOCS2O96007 188 aaPredicted RBP13.43□□□□□ -0.26
CLNS1A-207ENST00000527133 LTFP02788 710 aa13.43□□□□□ -0.26
CLNS1A-207ENST00000527133 MYF5P13349 255 aa13.43□□□□□ -0.26
CLNS1A-207ENST00000527133 KRT10P13645 584 aa13.43□□□□□ -0.26
CLNS1A-207ENST00000527133 NUDT1P36639 197 aa13.43□□□□□ -0.26
CLNS1A-207ENST00000527133 NNMTP40261 264 aa13.43□□□□□ -0.26
CLNS1A-207ENST00000527133 ERVPABLB-1P60509 514 aa13.43□□□□□ -0.26
CLNS1A-207ENST00000527133 VAC14Q08AM6 782 aa13.43□□□□□ -0.26
CLNS1A-207ENST00000527133 CUL2Q13617 745 aa13.43□□□□□ -0.26
CLNS1A-207ENST00000527133 SETMARQ53H47 684 aaPredicted RBP13.43□□□□□ -0.26
CLNS1A-207ENST00000527133 CDCP2Q5VXM1 449 aa13.43□□□□□ -0.26
CLNS1A-207ENST00000527133 IRGQQ8WZA9 623 aa13.43□□□□□ -0.26
CLNS1A-207ENST00000527133 KLHDC7BQ96G42 594 aa13.43□□□□□ -0.26
CLNS1A-207ENST00000527133 SPAG5Q96R06 1193 aa13.43□□□□□ -0.26
CLNS1A-207ENST00000527133 MYOCQ99972 504 aa13.43□□□□□ -0.26
CLNS1A-207ENST00000527133 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.43□□□□□ -0.26
CLNS1A-207ENST00000527133 KDM4CQ9H3R0 1056 aa13.43□□□□□ -0.26
CLNS1A-207ENST00000527133 CAAP1Q9H8G2 361 aa13.43□□□□□ -0.26
CLNS1A-207ENST00000527133 POLR1BQ9H9Y6 1135 aa13.43□□□□□ -0.26
CLNS1A-207ENST00000527133 PRAMEF26H0Y7S4 382 aa13.42□□□□□ -0.26
CLNS1A-207ENST00000527133 SLC7A4O43246 635 aa13.42□□□□□ -0.26
CLNS1A-207ENST00000527133 SLC28A2O43868 658 aa13.42□□□□□ -0.26
CLNS1A-207ENST00000527133 STX10O60499 249 aa13.42□□□□□ -0.26
CLNS1A-207ENST00000527133 VDRP11473 427 aa13.42□□□□□ -0.26
CLNS1A-207ENST00000527133 CKMT1AP12532 417 aa13.42□□□□□ -0.26
CLNS1A-207ENST00000527133 LSSP48449 732 aa13.42□□□□□ -0.26
CLNS1A-207ENST00000527133 PMF1Q6P1K2 205 aa13.42□□□□□ -0.26
CLNS1A-207ENST00000527133 TRIM69Q86WT6 500 aa13.42□□□□□ -0.26
CLNS1A-207ENST00000527133 LGI2Q8N0V4 545 aa13.42□□□□□ -0.26
CLNS1A-207ENST00000527133 DQX1Q8TE96 717 aaKnown RBP13.42□□□□□ -0.26
CLNS1A-207ENST00000527133 FAM131CQ96AQ9 280 aa13.42□□□□□ -0.26
CLNS1A-207ENST00000527133 VCPIP1Q96JH7 1222 aa13.42□□□□□ -0.26
CLNS1A-207ENST00000527133 DPH1Q9BZG8 443 aa13.42□□□□□ -0.26
CLNS1A-207ENST00000527133 MIS12Q9H081 205 aa13.42□□□□□ -0.26
CLNS1A-207ENST00000527133 OSBPL2Q9H1P3 480 aa13.42□□□□□ -0.26
CLNS1A-207ENST00000527133 ASCL3Q9NQ33 180 aa13.42□□□□□ -0.26
CLNS1A-207ENST00000527133 THSD1Q9NS62 852 aa13.42□□□□□ -0.26
CLNS1A-207ENST00000527133 XPO7Q9UIA9 1087 aaKnown RBP13.42□□□□□ -0.26
CLNS1A-207ENST00000527133 SARDHQ9UL12 918 aa13.42□□□□□ -0.26
CLNS1A-207ENST00000527133 TLR6Q9Y2C9 796 aa13.42□□□□□ -0.26
CLNS1A-207ENST00000527133 DOCK9Q9BZ29 2069 aa13.41□□□□□ -0.26
CLNS1A-207ENST00000527133 WISP1O95388 367 aa13.41□□□□□ -0.26
CLNS1A-207ENST00000527133 MYL1P05976 194 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms