RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 COL5A1P20908 1838 aaPredicted RBP16.64■□□□□ 0.25
PTPRU-210ENST00000527027 TK2O00142 265 aa16.64■□□□□ 0.25
PTPRU-210ENST00000527027 PMM2O15305 246 aa16.64■□□□□ 0.25
PTPRU-210ENST00000527027 RRP8O43159 456 aaKnown RBP16.64■□□□□ 0.25
PTPRU-210ENST00000527027 SART1O43290 800 aaKnown RBP16.64■□□□□ 0.25
PTPRU-210ENST00000527027 LATO43561 262 aa16.64■□□□□ 0.25
PTPRU-210ENST00000527027 TLX3O43711 291 aaPredicted RBP16.64■□□□□ 0.25
PTPRU-210ENST00000527027 MOCS2O96007 188 aaPredicted RBP16.64■□□□□ 0.25
PTPRU-210ENST00000527027 IL1BP01584 269 aa16.64■□□□□ 0.25
PTPRU-210ENST00000527027 MZF1P28698 734 aaPredicted RBP16.64■□□□□ 0.25
PTPRU-210ENST00000527027 NNMTP40261 264 aa16.64■□□□□ 0.25
PTPRU-210ENST00000527027 RPL34P49207 117 aaKnown RBP16.64■□□□□ 0.25
PTPRU-210ENST00000527027 NUCB2P80303 420 aa16.64■□□□□ 0.25
PTPRU-210ENST00000527027 LRRC63Q05C16 580 aa16.64■□□□□ 0.25
PTPRU-210ENST00000527027 C19orf57Q0VDD7 668 aa16.64■□□□□ 0.25
PTPRU-210ENST00000527027 ILKQ13418 452 aa16.64■□□□□ 0.25
PTPRU-210ENST00000527027 SLC12A1Q13621 1099 aa16.64■□□□□ 0.25
PTPRU-210ENST00000527027 ELAVL3Q14576 367 aaKnown RBP16.64■□□□□ 0.25
PTPRU-210ENST00000527027 RTP5Q14D33 572 aa16.64■□□□□ 0.25
PTPRU-210ENST00000527027 HES3Q5TGS1 186 aa16.64■□□□□ 0.25
PTPRU-210ENST00000527027 NAPEPLDQ6IQ20 393 aa16.64■□□□□ 0.25
PTPRU-210ENST00000527027 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.64■□□□□ 0.25
PTPRU-210ENST00000527027 BEND5Q7L4P6 421 aa16.64■□□□□ 0.25
PTPRU-210ENST00000527027 PRPF39Q86UA1 669 aaKnown RBP16.64■□□□□ 0.25
PTPRU-210ENST00000527027 LGI2Q8N0V4 545 aa16.64■□□□□ 0.25
PTPRU-210ENST00000527027 PPM1KQ8N3J5 372 aa16.64■□□□□ 0.25
PTPRU-210ENST00000527027 MFSD2AQ8NA29 543 aa16.64■□□□□ 0.25
PTPRU-210ENST00000527027 KAT5Q92993 513 aa16.64■□□□□ 0.25
PTPRU-210ENST00000527027 FAM149B1Q96BN6 582 aa16.64■□□□□ 0.25
PTPRU-210ENST00000527027 GSDMAQ96QA5 445 aa16.64■□□□□ 0.25
PTPRU-210ENST00000527027 PRORYQ9H606 182 aa16.64■□□□□ 0.25
PTPRU-210ENST00000527027 XPO7Q9UIA9 1087 aaKnown RBP16.64■□□□□ 0.25
PTPRU-210ENST00000527027 CAPN9O14815 690 aa16.63■□□□□ 0.25
PTPRU-210ENST00000527027 CALCAP01258 141 aa16.63■□□□□ 0.25
PTPRU-210ENST00000527027 APOEP02649 317 aa16.63■□□□□ 0.25
PTPRU-210ENST00000527027 CKMT2P17540 419 aa16.63■□□□□ 0.25
PTPRU-210ENST00000527027 TACR2P21452 398 aa16.63■□□□□ 0.25
PTPRU-210ENST00000527027 DRD3P35462 400 aa16.63■□□□□ 0.25
PTPRU-210ENST00000527027 STK19P49842 368 aaPredicted RBP16.63■□□□□ 0.25
PTPRU-210ENST00000527027 SFMBT2Q5VUG0 894 aa16.63■□□□□ 0.25
PTPRU-210ENST00000527027 SYPL2Q5VXT5 272 aa16.63■□□□□ 0.25
PTPRU-210ENST00000527027 RAP1GAP2Q684P5 730 aa16.63■□□□□ 0.25
PTPRU-210ENST00000527027 CACTIN-AS1Q8N1I8 211 aa16.63■□□□□ 0.25
PTPRU-210ENST00000527027 TRIM62Q9BVG3 475 aa16.63■□□□□ 0.25
PTPRU-210ENST00000527027 KDM4CQ9H3R0 1056 aa16.63■□□□□ 0.25
PTPRU-210ENST00000527027 ST7Q9NRC1 585 aa16.63■□□□□ 0.25
PTPRU-210ENST00000527027 ARHGAP20Q9P2F6 1191 aa16.63■□□□□ 0.25
PTPRU-210ENST00000527027 TJP2Q9UDY2 1190 aa16.63■□□□□ 0.25
PTPRU-210ENST00000527027 ATP6V1DQ9Y5K8 247 aa16.63■□□□□ 0.25
PTPRU-210ENST00000527027 TRIM49BA6NDI0 452 aa16.62■□□□□ 0.25
PTPRU-210ENST00000527027 MAGEC1O60732 1142 aa16.62■□□□□ 0.25
PTPRU-210ENST00000527027 NUDT1P36639 197 aa16.62■□□□□ 0.25
PTPRU-210ENST00000527027 GPD2P43304 727 aa16.62■□□□□ 0.25
PTPRU-210ENST00000527027 ACADSBP45954 432 aa16.62■□□□□ 0.25
PTPRU-210ENST00000527027 PPP2CBP62714 309 aa16.62■□□□□ 0.25
PTPRU-210ENST00000527027 PPP2CAP67775 309 aa16.62■□□□□ 0.25
PTPRU-210ENST00000527027 SULT2A1Q06520 285 aa16.62■□□□□ 0.25
PTPRU-210ENST00000527027 CETN1Q12798 172 aa16.62■□□□□ 0.25
PTPRU-210ENST00000527027 ZC3H12AQ5D1E8 599 aaKnown RBP16.62■□□□□ 0.25
PTPRU-210ENST00000527027 KANSL1Q7Z3B3 1105 aa16.62■□□□□ 0.25
PTPRU-210ENST00000527027 TAC4Q86UU9 113 aa16.62■□□□□ 0.25
PTPRU-210ENST00000527027 IQCHQ86VS3 1027 aa16.62■□□□□ 0.25
PTPRU-210ENST00000527027 CHSY1Q86X52 802 aa16.62■□□□□ 0.25
PTPRU-210ENST00000527027 SPATS2Q86XZ4 545 aaKnown RBP16.62■□□□□ 0.25
PTPRU-210ENST00000527027 LMO3Q8TAP4 145 aa16.62■□□□□ 0.25
PTPRU-210ENST00000527027 SLC39A7Q92504 469 aa16.62■□□□□ 0.25
PTPRU-210ENST00000527027 BAP1Q92560 729 aa16.62■□□□□ 0.25
PTPRU-210ENST00000527027 FAM131CQ96AQ9 280 aa16.62■□□□□ 0.25
PTPRU-210ENST00000527027 BTN2A3PQ96KV6 586 aa16.62■□□□□ 0.25
PTPRU-210ENST00000527027 SPAG5Q96R06 1193 aa16.62■□□□□ 0.25
PTPRU-210ENST00000527027 GTPBP4Q9BZE4 634 aaKnown RBP16.62■□□□□ 0.25
PTPRU-210ENST00000527027 CYTH4Q9UIA0 394 aa16.62■□□□□ 0.25
PTPRU-210ENST00000527027 DMTF1Q9Y222 760 aa16.62■□□□□ 0.25
PTPRU-210ENST00000527027 PLXNA2O75051 1894 aa16.62■□□□□ 0.25
PTPRU-210ENST00000527027 CFAP46Q8IYW2 2715 aa16.61■□□□□ 0.25
PTPRU-210ENST00000527027 SLC7A4O43246 635 aa16.61■□□□□ 0.25
PTPRU-210ENST00000527027 PRB1P04280 392 aa16.61■□□□□ 0.25
PTPRU-210ENST00000527027 VAV1P15498 845 aa16.61■□□□□ 0.25
PTPRU-210ENST00000527027 PLK1P53350 603 aa16.61■□□□□ 0.25
PTPRU-210ENST00000527027 GCNT1Q02742 428 aa16.61■□□□□ 0.25
PTPRU-210ENST00000527027 OVGP1Q12889 678 aa16.61■□□□□ 0.25
PTPRU-210ENST00000527027 RRAGAQ7L523 313 aa16.61■□□□□ 0.25
PTPRU-210ENST00000527027 SNIP1Q8TAD8 396 aaKnown RBP16.61■□□□□ 0.25
PTPRU-210ENST00000527027 STK32AQ8WU08 396 aa16.61■□□□□ 0.25
PTPRU-210ENST00000527027 FRS2Q8WU20 508 aa16.61■□□□□ 0.25
PTPRU-210ENST00000527027 FGF11Q92914 225 aa16.61■□□□□ 0.25
PTPRU-210ENST00000527027 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.61■□□□□ 0.25
PTPRU-210ENST00000527027 RAI2Q9Y5P3 530 aa16.61■□□□□ 0.25
PTPRU-210ENST00000527027 KCNU1A8MYU2 1149 aa16.6■□□□□ 0.25
PTPRU-210ENST00000527027 F5H5T6 163 aa16.6■□□□□ 0.25
PTPRU-210ENST00000527027 ATXN7O15265 892 aaPredicted RBP16.6■□□□□ 0.25
PTPRU-210ENST00000527027 P4HA2O15460 535 aa16.6■□□□□ 0.25
PTPRU-210ENST00000527027 RTN2O75298 545 aa16.6■□□□□ 0.25
PTPRU-210ENST00000527027 SMC2O95347 1197 aa16.6■□□□□ 0.25
PTPRU-210ENST00000527027 TRUB2O95900 331 aaKnown RBP16.6■□□□□ 0.25
PTPRU-210ENST00000527027 PDGFRAP16234 1089 aa16.6■□□□□ 0.25
PTPRU-210ENST00000527027 MAT2AP31153 395 aaKnown RBP16.6■□□□□ 0.25
PTPRU-210ENST00000527027 VASPP50552 380 aaPredicted RBP16.6■□□□□ 0.25
PTPRU-210ENST00000527027 METAP1P53582 386 aa16.6■□□□□ 0.25
PTPRU-210ENST00000527027 OXCT1P55809 520 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms