RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 DPYSL2Q16555 572 aa13.29□□□□□ -0.28
SMPD1-202ENST00000526280 SMTNL2Q2TAL5 461 aa13.29□□□□□ -0.28
SMPD1-202ENST00000526280 PLEKHG6Q3KR16 790 aa13.29□□□□□ -0.28
SMPD1-202ENST00000526280 PITRM1Q5JRX3 1037 aa13.29□□□□□ -0.28
SMPD1-202ENST00000526280 C6orf118Q5T5N4 469 aa13.29□□□□□ -0.28
SMPD1-202ENST00000526280 EGFLAMQ63HQ2 1017 aa13.29□□□□□ -0.28
SMPD1-202ENST00000526280 MBLAC2Q68D91 279 aa13.29□□□□□ -0.28
SMPD1-202ENST00000526280 C1orf210Q8IVY1 113 aa13.29□□□□□ -0.28
SMPD1-202ENST00000526280 APCDD1Q8J025 514 aa13.29□□□□□ -0.28
SMPD1-202ENST00000526280 TXLNBQ8N3L3 684 aa13.29□□□□□ -0.28
SMPD1-202ENST00000526280 ALLCQ8N6M5 410 aa13.29□□□□□ -0.28
SMPD1-202ENST00000526280 UCMAQ8WVF2 138 aa13.29□□□□□ -0.28
SMPD1-202ENST00000526280 SORCS1Q8WY21 1168 aa13.29□□□□□ -0.28
SMPD1-202ENST00000526280 HSPH1Q92598 858 aa13.29□□□□□ -0.28
SMPD1-202ENST00000526280 ALG14Q96F25 216 aa13.29□□□□□ -0.28
SMPD1-202ENST00000526280 CIPCQ9C0C6 399 aa13.29□□□□□ -0.28
SMPD1-202ENST00000526280 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.29□□□□□ -0.28
SMPD1-202ENST00000526280 TMEM248Q9NWD8 314 aa13.29□□□□□ -0.28
SMPD1-202ENST00000526280 SPATA6Q9NWH7 488 aaPredicted RBP13.29□□□□□ -0.28
SMPD1-202ENST00000526280 C2orf42Q9NWW7 574 aa13.29□□□□□ -0.28
SMPD1-202ENST00000526280 THAP10Q9P2Z0 257 aaPredicted RBP13.29□□□□□ -0.28
SMPD1-202ENST00000526280 OR51B4Q9Y5P0 310 aa13.29□□□□□ -0.28
SMPD1-202ENST00000526280 ILVBLA1L0T0 632 aa13.28□□□□□ -0.28
SMPD1-202ENST00000526280 WASH4PA8MWX3 477 aa13.28□□□□□ -0.28
SMPD1-202ENST00000526280 EEF2KO00418 725 aaKnown RBP13.28□□□□□ -0.28
SMPD1-202ENST00000526280 GALR2O43603 387 aaPredicted RBP13.28□□□□□ -0.28
SMPD1-202ENST00000526280 NRDCO43847 1150 aa13.28□□□□□ -0.28
SMPD1-202ENST00000526280 ADAM23O75077 832 aa13.28□□□□□ -0.28
SMPD1-202ENST00000526280 MOCS3O95396 460 aa13.28□□□□□ -0.28
SMPD1-202ENST00000526280 KLF8O95600 359 aaPredicted RBP13.28□□□□□ -0.28
SMPD1-202ENST00000526280 ATP5BP06576 529 aaKnown RBP13.28□□□□□ -0.28
SMPD1-202ENST00000526280 RHOCP08134 193 aa13.28□□□□□ -0.28
SMPD1-202ENST00000526280 DLDP09622 509 aaKnown RBP13.28□□□□□ -0.28
SMPD1-202ENST00000526280 POLR2EP19388 210 aaKnown RBP13.28□□□□□ -0.28
SMPD1-202ENST00000526280 CXCL12P48061 93 aa13.28□□□□□ -0.28
SMPD1-202ENST00000526280 HCAR3P49019 387 aa13.28□□□□□ -0.28
SMPD1-202ENST00000526280 MAPKAPK2P49137 400 aa13.28□□□□□ -0.28
SMPD1-202ENST00000526280 CCR3P51677 355 aa13.28□□□□□ -0.28
SMPD1-202ENST00000526280 TPI1P60174 286 aa13.28□□□□□ -0.28
SMPD1-202ENST00000526280 KIF5AQ12840 1032 aa13.28□□□□□ -0.28
SMPD1-202ENST00000526280 ATP13A4Q4VNC1 1196 aa13.28□□□□□ -0.28
SMPD1-202ENST00000526280 PPP6R3Q5H9R7 873 aaPredicted RBP13.28□□□□□ -0.28
SMPD1-202ENST00000526280 RNF219Q5W0B1 726 aaPredicted RBP13.28□□□□□ -0.28
SMPD1-202ENST00000526280 ZNF783Q6ZMS7 281 aa13.28□□□□□ -0.28
SMPD1-202ENST00000526280 SYT13Q7L8C5 426 aa13.28□□□□□ -0.28
SMPD1-202ENST00000526280 TRMT11Q7Z4G4 463 aaKnown RBP13.28□□□□□ -0.28
SMPD1-202ENST00000526280 CCDC33Q8N5R6 958 aa13.28□□□□□ -0.28
SMPD1-202ENST00000526280 RTL3Q8N8U3 475 aaKnown RBP13.28□□□□□ -0.28
SMPD1-202ENST00000526280 TXNDC5Q8NBS9 432 aaKnown RBP13.28□□□□□ -0.28
SMPD1-202ENST00000526280 TPCN2Q8NHX9 752 aa13.28□□□□□ -0.28
SMPD1-202ENST00000526280 FAM71BQ8TC56 605 aa13.28□□□□□ -0.28
SMPD1-202ENST00000526280 ACDQ96AP0 544 aa13.28□□□□□ -0.28
SMPD1-202ENST00000526280 ACOX2Q99424 681 aa13.28□□□□□ -0.28
SMPD1-202ENST00000526280 CATSPERBQ9H7T0 1116 aa13.28□□□□□ -0.28
SMPD1-202ENST00000526280 ZDHHC4Q9NPG8 344 aa13.28□□□□□ -0.28
SMPD1-202ENST00000526280 NDFIP2Q9NV92 336 aa13.28□□□□□ -0.28
SMPD1-202ENST00000526280 CWC15Q9P013 229 aaKnown RBP13.28□□□□□ -0.28
SMPD1-202ENST00000526280 MMP17Q9ULZ9 603 aa13.28□□□□□ -0.28
SMPD1-202ENST00000526280 PLA2G4CQ9UP65 541 aa13.28□□□□□ -0.28
SMPD1-202ENST00000526280 ALG6Q9Y672 507 aa13.28□□□□□ -0.28
SMPD1-202ENST00000526280 A0A0D9SEW6 157 aa13.27□□□□□ -0.29
SMPD1-202ENST00000526280 A0A0U1RQJ8 604 aa13.27□□□□□ -0.29
SMPD1-202ENST00000526280 SGK1O00141 431 aa13.27□□□□□ -0.29
SMPD1-202ENST00000526280 FGF10O15520 208 aaPredicted RBP13.27□□□□□ -0.29
SMPD1-202ENST00000526280 LAMTOR5O43504 91 aa13.27□□□□□ -0.29
SMPD1-202ENST00000526280 BUB1O43683 1085 aa13.27□□□□□ -0.29
SMPD1-202ENST00000526280 PAPSS2O95340 614 aaPredicted RBP13.27□□□□□ -0.29
SMPD1-202ENST00000526280 ASLP04424 464 aa13.27□□□□□ -0.29
SMPD1-202ENST00000526280 KRT7P08729 469 aa13.27□□□□□ -0.29
SMPD1-202ENST00000526280 GOT1P17174 413 aa13.27□□□□□ -0.29
SMPD1-202ENST00000526280 COMTP21964 271 aa13.27□□□□□ -0.29
SMPD1-202ENST00000526280 NTSR1P30989 418 aa13.27□□□□□ -0.29
SMPD1-202ENST00000526280 ARSEP51690 589 aa13.27□□□□□ -0.29
SMPD1-202ENST00000526280 SATB1Q01826 763 aa13.27□□□□□ -0.29
SMPD1-202ENST00000526280 ENPP2Q13822 863 aa13.27□□□□□ -0.29
SMPD1-202ENST00000526280 PTPRNQ16849 979 aa13.27□□□□□ -0.29
SMPD1-202ENST00000526280 EOGTQ5NDL2 527 aa13.27□□□□□ -0.29
SMPD1-202ENST00000526280 LRRC38Q5VT99 294 aa13.27□□□□□ -0.29
SMPD1-202ENST00000526280 C11orf63Q6NUN7 778 aa13.27□□□□□ -0.29
SMPD1-202ENST00000526280 RFX8Q6ZV50 586 aa13.27□□□□□ -0.29
SMPD1-202ENST00000526280 POLNQ7Z5Q5 900 aa13.27□□□□□ -0.29
SMPD1-202ENST00000526280 CHPFQ8IZ52 775 aa13.27□□□□□ -0.29
SMPD1-202ENST00000526280 MAML2Q8IZL2 1156 aaPredicted RBP13.27□□□□□ -0.29
SMPD1-202ENST00000526280 CYB5D2Q8WUJ1 264 aa13.27□□□□□ -0.29
SMPD1-202ENST00000526280 ATRIPQ8WXE1 791 aa13.27□□□□□ -0.29
SMPD1-202ENST00000526280 PCDH18Q9HCL0 1135 aa13.27□□□□□ -0.29
SMPD1-202ENST00000526280 PRMT8Q9NR22 394 aaPredicted RBP13.27□□□□□ -0.29
SMPD1-202ENST00000526280 POLR3BQ9NW08 1133 aaPredicted RBP13.27□□□□□ -0.29
SMPD1-202ENST00000526280 DNAI1Q9UI46 699 aa13.27□□□□□ -0.29
SMPD1-202ENST00000526280 MUC6Q6W4X9 2439 aa13.26□□□□□ -0.29
SMPD1-202ENST00000526280 WASH3PC4AMC7 463 aa13.26□□□□□ -0.29
SMPD1-202ENST00000526280 H3BRJ5 948 aa13.26□□□□□ -0.29
SMPD1-202ENST00000526280 GJC1P36383 396 aa13.26□□□□□ -0.29
SMPD1-202ENST00000526280 ARL4AP40617 200 aa13.26□□□□□ -0.29
SMPD1-202ENST00000526280 IL12RB1P42701 662 aa13.26□□□□□ -0.29
SMPD1-202ENST00000526280 CTSOP43234 321 aaPredicted RBP13.26□□□□□ -0.29
SMPD1-202ENST00000526280 NAP1L1P55209 391 aaKnown RBP13.26□□□□□ -0.29
SMPD1-202ENST00000526280 CDH6P55285 790 aa13.26□□□□□ -0.29
SMPD1-202ENST00000526280 ECT2LQ008S8 904 aa13.26□□□□□ -0.29
SMPD1-202ENST00000526280 GNA12Q03113 381 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms