RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 PTPRBP23467 1997 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 SPEGQ15772 3267 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 EDDM13A0A1B0GTR0 161 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 TARSL2A2RTX5 802 aaKnown RBP6.79□□□□□ -1.32
CD44-221ENST00000526000 TYW5A2RUC4 315 aaKnown RBP6.79□□□□□ -1.32
CD44-221ENST00000526000 CAPN9O14815 690 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 GRAP2O75791 330 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 ENDOD1O94919 500 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 LUC7L3O95232 432 aaKnown RBP6.79□□□□□ -1.32
CD44-221ENST00000526000 MOCS3O95396 460 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 LATS1O95835 1130 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 MBD3O95983 291 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 MT-CO3P00414 261 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 IGLV3-27P01718 113 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 ASLP04424 464 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 MPOP05164 745 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 KRT5P13647 590 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 PRLRP16471 622 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 CKMT2P17540 419 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 C5AR1P21730 350 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 EPHA8P29322 1005 aaPredicted RBP6.79□□□□□ -1.32
CD44-221ENST00000526000 NNMTP40261 264 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 ARRB1P49407 418 aaPredicted RBP6.79□□□□□ -1.32
CD44-221ENST00000526000 CCR5P51681 352 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 ADPRHP54922 357 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 CLDN2P57739 230 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 ZNF445P59923 1031 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 DAB2P98082 770 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 CNTN1Q12860 1018 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 TAF5Q15542 800 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 EDRF1Q3B7T1 1238 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 TAF1BQ53T94 588 aaPredicted RBP6.79□□□□□ -1.32
CD44-221ENST00000526000 SLC45A4Q5BKX6 768 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 MPP7Q5T2T1 576 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 ARHGAP40Q5TG30 622 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 NUGGCQ68CJ6 796 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 KLHL10Q6JEL2 608 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 MSANTD2Q6P1R3 559 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 FBXL19Q6PCT2 694 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 TAC4Q86UU9 113 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 CREBRFQ8IUR6 639 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 UBR7Q8N806 425 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 TSC1Q92574 1164 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 FGF11Q92914 225 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 RNF34Q969K3 372 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 COL26A1Q96A83 441 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 NXPE2Q96DL1 559 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 TSG101Q99816 390 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.79□□□□□ -1.32
CD44-221ENST00000526000 GTPBP4Q9BZE4 634 aaKnown RBP6.79□□□□□ -1.32
CD44-221ENST00000526000 FBRSQ9HAH7 460 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 FZD3Q9NPG1 666 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 ACP6Q9NPH0 428 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 UCKL1Q9NWZ5 548 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 TJP2Q9UDY2 1190 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 ARMCX3Q9UH62 379 aaPredicted RBP6.79□□□□□ -1.32
CD44-221ENST00000526000 CLCA2Q9UQC9 943 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 PCDHB1Q9Y5F3 818 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 SNX10Q9Y5X0 201 aa6.79□□□□□ -1.32
CD44-221ENST00000526000 ITIH6Q6UXX5 1313 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 CYSRT1A8MQ03 144 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 RNF103O00237 685 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 AGRPO00253 132 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 ATXN7O15265 892 aaPredicted RBP6.78□□□□□ -1.32
CD44-221ENST00000526000 IRAK2O43187 625 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 RNGTTO60942 597 aaKnown RBP6.78□□□□□ -1.32
CD44-221ENST00000526000 LETM1O95202 739 aaPredicted RBP6.78□□□□□ -1.32
CD44-221ENST00000526000 TRUB2O95900 331 aaKnown RBP6.78□□□□□ -1.32
CD44-221ENST00000526000 APOEP02649 317 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 SRPRAP08240 638 aaKnown RBP6.78□□□□□ -1.32
CD44-221ENST00000526000 C1SP09871 688 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 DRD3P35462 400 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 USP8P40818 1118 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 FMO5P49326 533 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 IRAK1P51617 712 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 STX17P56962 302 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 FKBP3Q00688 224 aaKnown RBP6.78□□□□□ -1.32
CD44-221ENST00000526000 INSM1Q01101 510 aaPredicted RBP6.78□□□□□ -1.32
CD44-221ENST00000526000 KCNH2Q12809 1159 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 DLG2Q15700 870 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 SKOR2Q2VWA4 1001 aaPredicted RBP6.78□□□□□ -1.32
CD44-221ENST00000526000 CCDC40Q4G0X9 1142 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 NAPEPLDQ6IQ20 393 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 GJB7Q6PEY0 223 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 FOXR1Q6PIV2 292 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 CRTC1Q6UUV9 634 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 Q6ZVU0 165 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 GPR155Q7Z3F1 870 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 C14orf80Q86SX3 495 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 SPACA3Q8IXA5 215 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 CCAR2Q8N163 923 aaKnown RBP6.78□□□□□ -1.32
CD44-221ENST00000526000 SLC25A45Q8N413 288 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 ZNF843Q8N446 348 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 MFSD2AQ8NA29 543 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 EHBP1Q8NDI1 1231 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 OR52K2Q8NGK3 314 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 OR8D1Q8WZ84 308 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 IRGQQ8WZA9 623 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 BAP1Q92560 729 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 SLC35C1Q96A29 364 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms