RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 ARHGAP29Q52LW3 1261 aa6.68□□□□□ -1.34
CD44-214ENST00000525211 SLC44A4Q53GD3 710 aa6.68□□□□□ -1.34
CD44-214ENST00000525211 PPP6R3Q5H9R7 873 aaPredicted RBP6.68□□□□□ -1.34
CD44-214ENST00000525211 ZNF569Q5MCW4 686 aa6.68□□□□□ -1.34
CD44-214ENST00000525211 MEI1Q5TIA1 1274 aa6.68□□□□□ -1.34
CD44-214ENST00000525211 NUGGCQ68CJ6 796 aa6.68□□□□□ -1.34
CD44-214ENST00000525211 FSTL4Q6MZW2 842 aa6.68□□□□□ -1.34
CD44-214ENST00000525211 LEKR1Q6ZMV7 388 aa6.68□□□□□ -1.34
CD44-214ENST00000525211 DDX42Q86XP3 938 aaKnown RBP eCLIP6.68□□□□□ -1.34
CD44-214ENST00000525211 ARHGAP12Q8IWW6 846 aa6.68□□□□□ -1.34
CD44-214ENST00000525211 UNC45BQ8IWX7 931 aa6.68□□□□□ -1.34
CD44-214ENST00000525211 YAF2Q8IY57 180 aa6.68□□□□□ -1.34
CD44-214ENST00000525211 ARMC2Q8NEN0 867 aa6.68□□□□□ -1.34
CD44-214ENST00000525211 OR7D4Q8NG98 312 aa6.68□□□□□ -1.34
CD44-214ENST00000525211 TEKT4Q8WW24 435 aa6.68□□□□□ -1.34
CD44-214ENST00000525211 AZIN2Q96A70 460 aa6.68□□□□□ -1.34
CD44-214ENST00000525211 TMA16Q96EY4 203 aaKnown RBP6.68□□□□□ -1.34
CD44-214ENST00000525211 HES6Q96HZ4 224 aa6.68□□□□□ -1.34
CD44-214ENST00000525211 CELF6Q96J87 481 aaKnown RBP6.68□□□□□ -1.34
CD44-214ENST00000525211 C1orf74Q96LT6 269 aa6.68□□□□□ -1.34
CD44-214ENST00000525211 RPRD1AQ96P16 312 aaPredicted RBP6.68□□□□□ -1.34
CD44-214ENST00000525211 CSPG4P5Q96PW8 444 aa6.68□□□□□ -1.34
CD44-214ENST00000525211 UCN2Q96RP3 112 aa6.68□□□□□ -1.34
CD44-214ENST00000525211 FAM118BQ9BPY3 351 aa6.68□□□□□ -1.34
CD44-214ENST00000525211 OCSTAMPQ9BR26 566 aa6.68□□□□□ -1.34
CD44-214ENST00000525211 TRIM62Q9BVG3 475 aa6.68□□□□□ -1.34
CD44-214ENST00000525211 BBS2Q9BXC9 721 aa6.68□□□□□ -1.34
CD44-214ENST00000525211 FOXQ1Q9C009 403 aa6.68□□□□□ -1.34
CD44-214ENST00000525211 DCLK3Q9C098 648 aa6.68□□□□□ -1.34
CD44-214ENST00000525211 MTG2Q9H4K7 406 aa6.68□□□□□ -1.34
CD44-214ENST00000525211 EPHX3Q9H6B9 360 aa6.68□□□□□ -1.34
CD44-214ENST00000525211 SLC2A4RGQ9NR83 387 aa6.68□□□□□ -1.34
CD44-214ENST00000525211 KCND1Q9NSA2 647 aa6.68□□□□□ -1.34
CD44-214ENST00000525211 IGSF9Q9P2J2 1179 aa6.68□□□□□ -1.34
CD44-214ENST00000525211 SAE1Q9UBE0 346 aaPredicted RBP6.68□□□□□ -1.34
CD44-214ENST00000525211 LSM7Q9UK45 103 aaKnown RBP6.68□□□□□ -1.34
CD44-214ENST00000525211 ZKSCAN5Q9Y2L8 839 aa6.68□□□□□ -1.34
CD44-214ENST00000525211 PCDHA3Q9Y5H8 950 aa6.68□□□□□ -1.34
CD44-214ENST00000525211 ATG2BQ96BY7 2078 aa6.68□□□□□ -1.34
CD44-214ENST00000525211 F5H5T6 163 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 SPECC1L-ADORA2AF8WAN1 911 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 K7EQS6 105 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 EEF2KO00418 725 aaKnown RBP6.67□□□□□ -1.34
CD44-214ENST00000525211 ZNF185O15231 689 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 PI15O43692 258 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 CACNG3O60359 315 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 SNAP91O60641 907 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 TULP3O75386 442 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 IPO7O95373 1038 aaKnown RBP6.67□□□□□ -1.34
CD44-214ENST00000525211 LATS1O95835 1130 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 CD160O95971 181 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 EGFP01133 1207 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 HNRNPLP14866 589 aaKnown RBP eCLIP6.67□□□□□ -1.34
CD44-214ENST00000525211 GLULP15104 373 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 PECAM1P16284 738 aaPredicted RBP6.67□□□□□ -1.34
CD44-214ENST00000525211 ERCC2P18074 760 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 TARSP26639 723 aaKnown RBP6.67□□□□□ -1.34
CD44-214ENST00000525211 CXCR5P32302 372 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 CTNNA1P35221 906 aaKnown RBP6.67□□□□□ -1.34
CD44-214ENST00000525211 CSKP41240 450 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 CDKN2BP42772 138 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 KPNA1P52294 538 aaPredicted RBP6.67□□□□□ -1.34
CD44-214ENST00000525211 NRLP54845 237 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 ZXDAP98168 799 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 NRG1Q02297 640 aaPredicted RBP6.67□□□□□ -1.34
CD44-214ENST00000525211 GBE1Q04446 702 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 GAS6Q14393 721 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 PDGFRLQ15198 375 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 ITPRIPL2Q3MIP1 535 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 FUT11Q495W5 492 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 EFHC2Q5JST6 749 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 NCBP2-AS2Q69YL0 99 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 RWDD4Q6NW29 188 aaKnown RBP6.67□□□□□ -1.34
CD44-214ENST00000525211 SPOCD1Q6ZMY3 1216 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 Q6ZS52 159 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 TPRG1Q6ZUI0 275 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 RFX8Q6ZV50 586 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 SND1Q7KZF4 910 aaKnown RBP eCLIP6.67□□□□□ -1.34
CD44-214ENST00000525211 KIAA0907Q7Z7F0 614 aaPredicted RBP6.67□□□□□ -1.34
CD44-214ENST00000525211 ADIPOR2Q86V24 386 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 CARNMT1Q8N4J0 409 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 RNF10Q8N5U6 811 aaKnown RBP6.67□□□□□ -1.34
CD44-214ENST00000525211 DDI1Q8WTU0 396 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 COG1Q8WTW3 980 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 VOPP1Q96AW1 172 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 FAF2Q96CS3 445 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 TBC1D31Q96DN5 1066 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 ZNF419Q96HQ0 510 aaPredicted RBP6.67□□□□□ -1.34
CD44-214ENST00000525211 NSMCE3Q96MG7 304 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 ACOX2Q99424 681 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 HEMGNQ9BXL5 484 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 COL25A1Q9BXS0 654 aaPredicted RBP6.67□□□□□ -1.34
CD44-214ENST00000525211 SLC39A8Q9C0K1 460 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 ARHGEF4Q9NR80 690 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 ABCB8Q9NUT2 735 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 DNAJC17Q9NVM6 304 aaKnown RBP6.67□□□□□ -1.34
CD44-214ENST00000525211 MARK1Q9P0L2 795 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 TBC1D14Q9P2M4 693 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 RAPGEFL1Q9UHV5 662 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 DNAI1Q9UI46 699 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms