RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 TBCCD1Q9NVR7 557 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 HESX1Q9UBX0 185 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 AP4E1Q9UPM8 1137 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 RPS6KL1Q9Y6S9 549 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 LTBP4Q8N2S1 1624 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 ERVK-10P10266 1014 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 ENO3P13929 434 aaPredicted RBP10.48□□□□□ -0.73
SPIDR-225ENST00000524141 CDKL1Q00532 357 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 CEACAM7Q14002 265 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 GK3PQ14409 553 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 PPP2R5DQ14738 602 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 LSM12Q3MHD2 195 aaKnown RBP10.48□□□□□ -0.73
SPIDR-225ENST00000524141 CMC1Q7Z7K0 106 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 AMIGO2Q86SJ2 522 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 CLEC14AQ86T13 490 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 ZNF554Q86TJ5 538 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 CHERPQ8IWX8 916 aaKnown RBP10.48□□□□□ -0.73
SPIDR-225ENST00000524141 TMEM102Q8N9M5 508 aaPredicted RBP10.48□□□□□ -0.73
SPIDR-225ENST00000524141 TOP1MTQ969P6 601 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 CSPG4P5Q96PW8 444 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 PCYT2Q99447 389 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 NT5C1AQ9BXI3 368 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 SLC4A5Q9BY07 1137 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 NMRAL1Q9HBL8 299 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 ZNF358Q9NW07 568 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 SYBUQ9NX95 663 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 PACSIN3Q9UKS6 424 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 ZBTB12Q9Y330 459 aaPredicted RBP10.48□□□□□ -0.73
SPIDR-225ENST00000524141 PTPRFP10586 1907 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 RLFQ13129 1914 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 TRIP11Q15643 1979 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 A0A096LPK6 155 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 H3BSA7 217 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 ZNF189O75820 626 aaPredicted RBP10.48□□□□□ -0.73
SPIDR-225ENST00000524141 DGKIO75912 1065 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 H6PDO95479 791 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 TCF7P36402 384 aaPredicted RBP10.48□□□□□ -0.73
SPIDR-225ENST00000524141 NDST1P52848 882 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 PKNOX1P55347 436 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 TUBA4AP68366 448 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 PRKAA1Q13131 559 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 FRG1Q14331 258 aaKnown RBP10.48□□□□□ -0.73
SPIDR-225ENST00000524141 PPM1LQ5SGD2 360 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 ISLR2Q6UXK2 745 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 AGBL3Q8NEM8 1001 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 SLC7A14Q8TBB6 771 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 PGBD4Q96DM1 585 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 HPDLQ96IR7 371 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 ZNF597Q96LX8 424 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 DRC3Q9H069 523 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 CDT1Q9H211 546 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 ZNF385DQ9H6B1 395 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 LRRC40Q9H9A6 602 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 ZBTB26Q9HCK0 441 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 OXSMQ9NWU1 459 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 ADAMTS5Q9UNA0 930 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 CDYLQ9Y232 598 aa10.48□□□□□ -0.73
SPIDR-225ENST00000524141 ARHGEF37A1IGU5 675 aa10.47□□□□□ -0.73
SPIDR-225ENST00000524141 NOP56O00567 594 aaKnown RBP10.47□□□□□ -0.73
SPIDR-225ENST00000524141 CFLARO15519 480 aa10.47□□□□□ -0.73
SPIDR-225ENST00000524141 TIMM44O43615 452 aa10.47□□□□□ -0.73
SPIDR-225ENST00000524141 FARP2O94887 1054 aaPredicted RBP10.47□□□□□ -0.73
SPIDR-225ENST00000524141 HNRNPCP07910 306 aaKnown RBP eCLIP10.47□□□□□ -0.73
SPIDR-225ENST00000524141 PFKMP08237 780 aa10.47□□□□□ -0.73
SPIDR-225ENST00000524141 ZNF26P17031 533 aaPredicted RBP10.47□□□□□ -0.73
SPIDR-225ENST00000524141 CYP3A5P20815 502 aa10.47□□□□□ -0.73
SPIDR-225ENST00000524141 ARL4AP40617 200 aa10.47□□□□□ -0.73
SPIDR-225ENST00000524141 HADHAP40939 763 aa10.47□□□□□ -0.73
SPIDR-225ENST00000524141 RGS7P49802 495 aa10.47□□□□□ -0.73
SPIDR-225ENST00000524141 GALK1P51570 392 aa10.47□□□□□ -0.73
SPIDR-225ENST00000524141 MS4A2Q01362 244 aa10.47□□□□□ -0.73
SPIDR-225ENST00000524141 TNFAIP1Q13829 316 aa10.47□□□□□ -0.73
SPIDR-225ENST00000524141 GOLGA7BQ2TAP0 167 aa10.47□□□□□ -0.73
SPIDR-225ENST00000524141 BSPRYQ5W0U4 402 aa10.47□□□□□ -0.73
SPIDR-225ENST00000524141 NCBP2-AS2Q69YL0 99 aa10.47□□□□□ -0.73
SPIDR-225ENST00000524141 DHRS4L2Q6PKH6 230 aa10.47□□□□□ -0.73
SPIDR-225ENST00000524141 STRA8Q7Z7C7 330 aa10.47□□□□□ -0.73
SPIDR-225ENST00000524141 TMEM110Q86TL2 294 aa10.47□□□□□ -0.73
SPIDR-225ENST00000524141 PLD6Q8N2A8 252 aaKnown RBP10.47□□□□□ -0.73
SPIDR-225ENST00000524141 FNDC8Q8TC99 324 aa10.47□□□□□ -0.73
SPIDR-225ENST00000524141 ABTB1Q969K4 478 aaPredicted RBP10.47□□□□□ -0.73
SPIDR-225ENST00000524141 ASB9Q96DX5 294 aa10.47□□□□□ -0.73
SPIDR-225ENST00000524141 GATA5Q9BWX5 397 aaPredicted RBP10.47□□□□□ -0.73
SPIDR-225ENST00000524141 FZD8Q9H461 694 aa10.47□□□□□ -0.73
SPIDR-225ENST00000524141 WDR55Q9H6Y2 383 aaPredicted RBP10.47□□□□□ -0.73
SPIDR-225ENST00000524141 GGA3Q9NZ52 723 aa10.47□□□□□ -0.73
SPIDR-225ENST00000524141 HACD3Q9P035 362 aa10.47□□□□□ -0.73
SPIDR-225ENST00000524141 RCOR3Q9P2K3 495 aaPredicted RBP10.47□□□□□ -0.73
SPIDR-225ENST00000524141 FAF1Q9UNN5 650 aaPredicted RBP10.47□□□□□ -0.73
SPIDR-225ENST00000524141 TNFSF13BQ9Y275 285 aa10.47□□□□□ -0.73
SPIDR-225ENST00000524141 MYRFQ9Y2G1 1151 aa10.47□□□□□ -0.73
SPIDR-225ENST00000524141 INO80B-WBP1J3KQ70 363 aa10.47□□□□□ -0.73
SPIDR-225ENST00000524141 RNF103O00237 685 aa10.47□□□□□ -0.73
SPIDR-225ENST00000524141 TRIM38O00635 465 aa10.47□□□□□ -0.73
SPIDR-225ENST00000524141 NEMP1O14524 444 aa10.47□□□□□ -0.73
SPIDR-225ENST00000524141 ACOT8O14734 319 aa10.47□□□□□ -0.73
SPIDR-225ENST00000524141 UBA1P22314 1058 aaKnown RBP10.47□□□□□ -0.73
SPIDR-225ENST00000524141 ALDH3B2P48448 385 aa10.47□□□□□ -0.73
SPIDR-225ENST00000524141 BACE1P56817 501 aa10.47□□□□□ -0.73
SPIDR-225ENST00000524141 NUP107P57740 925 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms