RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 ATXN7L3BQ96GX2 97 aa12.04□□□□□ -0.48
SDCBP-211ENST00000523441 APOLD1Q96LR9 279 aa12.04□□□□□ -0.48
SDCBP-211ENST00000523441 BACH2Q9BYV9 841 aa12.04□□□□□ -0.48
SDCBP-211ENST00000523441 ASCL3Q9NQ33 180 aa12.04□□□□□ -0.48
SDCBP-211ENST00000523441 CISHQ9NSE2 258 aa12.04□□□□□ -0.48
SDCBP-211ENST00000523441 EXOC1Q9NV70 894 aa12.04□□□□□ -0.48
SDCBP-211ENST00000523441 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.04□□□□□ -0.48
SDCBP-211ENST00000523441 IL17BQ9UHF5 180 aa12.04□□□□□ -0.48
SDCBP-211ENST00000523441 CYTH4Q9UIA0 394 aa12.04□□□□□ -0.48
SDCBP-211ENST00000523441 TSPAN16Q9UKR8 245 aa12.04□□□□□ -0.48
SDCBP-211ENST00000523441 TARSL2A2RTX5 802 aaKnown RBP12.03□□□□□ -0.48
SDCBP-211ENST00000523441 MAGEC1O60732 1142 aa12.03□□□□□ -0.48
SDCBP-211ENST00000523441 MOCS3O95396 460 aa12.03□□□□□ -0.48
SDCBP-211ENST00000523441 KRT13P13646 458 aa12.03□□□□□ -0.48
SDCBP-211ENST00000523441 ZNF18P17022 549 aa12.03□□□□□ -0.48
SDCBP-211ENST00000523441 DRD3P35462 400 aa12.03□□□□□ -0.48
SDCBP-211ENST00000523441 ERVPABLB-1P60509 514 aa12.03□□□□□ -0.48
SDCBP-211ENST00000523441 ECT2LQ008S8 904 aa12.03□□□□□ -0.48
SDCBP-211ENST00000523441 CDKN3Q16667 212 aa12.03□□□□□ -0.48
SDCBP-211ENST00000523441 CDCP2Q5VXM1 449 aa12.03□□□□□ -0.48
SDCBP-211ENST00000523441 CIR1Q86X95 450 aaPredicted RBP12.03□□□□□ -0.48
SDCBP-211ENST00000523441 EXD3Q8N9H8 876 aa12.03□□□□□ -0.48
SDCBP-211ENST00000523441 ANKRD52Q8NB46 1076 aa12.03□□□□□ -0.48
SDCBP-211ENST00000523441 KIAA0895Q8NCT3 520 aa12.03□□□□□ -0.48
SDCBP-211ENST00000523441 OR4C6Q8NH72 309 aa12.03□□□□□ -0.48
SDCBP-211ENST00000523441 IFI44Q8TCB0 444 aa12.03□□□□□ -0.48
SDCBP-211ENST00000523441 PTPRN2Q92932 1015 aa12.03□□□□□ -0.48
SDCBP-211ENST00000523441 ARHGAP9Q9BRR9 750 aa12.03□□□□□ -0.48
SDCBP-211ENST00000523441 DPH1Q9BZG8 443 aa12.03□□□□□ -0.48
SDCBP-211ENST00000523441 NUCKS1Q9H1E3 243 aaKnown RBP12.03□□□□□ -0.48
SDCBP-211ENST00000523441 ABCC13Q9NSE7 274 aa12.03□□□□□ -0.48
SDCBP-211ENST00000523441 DMAC2Q9NW81 257 aa12.03□□□□□ -0.48
SDCBP-211ENST00000523441 DNAJC28Q9NX36 388 aa12.03□□□□□ -0.48
SDCBP-211ENST00000523441 ARHGAP20Q9P2F6 1191 aa12.03□□□□□ -0.48
SDCBP-211ENST00000523441 HESX1Q9UBX0 185 aa12.03□□□□□ -0.48
SDCBP-211ENST00000523441 MAPK8IP1Q9UQF2 711 aa12.03□□□□□ -0.48
SDCBP-211ENST00000523441 IKBKBO14920 756 aa12.02□□□□□ -0.49
SDCBP-211ENST00000523441 XPO1O14980 1071 aaKnown RBP12.02□□□□□ -0.49
SDCBP-211ENST00000523441 CASC3O15234 703 aaKnown RBP12.02□□□□□ -0.49
SDCBP-211ENST00000523441 RNGTTO60942 597 aaKnown RBP12.02□□□□□ -0.49
SDCBP-211ENST00000523441 ALPPL2P10696 532 aa12.02□□□□□ -0.49
SDCBP-211ENST00000523441 TGM2P21980 687 aa12.02□□□□□ -0.49
SDCBP-211ENST00000523441 CLDN2P57739 230 aa12.02□□□□□ -0.49
SDCBP-211ENST00000523441 NUCB2P80303 420 aa12.02□□□□□ -0.49
SDCBP-211ENST00000523441 SRSF1Q07955 248 aaKnown RBP eCLIP12.02□□□□□ -0.49
SDCBP-211ENST00000523441 CNTN1Q12860 1018 aa12.02□□□□□ -0.49
SDCBP-211ENST00000523441 DRAP1Q14919 205 aaPredicted RBP12.02□□□□□ -0.49
SDCBP-211ENST00000523441 SETMARQ53H47 684 aaPredicted RBP12.02□□□□□ -0.49
SDCBP-211ENST00000523441 SGO2Q562F6 1265 aa12.02□□□□□ -0.49
SDCBP-211ENST00000523441 DCAF6Q58WW2 860 aa12.02□□□□□ -0.49
SDCBP-211ENST00000523441 RAP1GAP2Q684P5 730 aa12.02□□□□□ -0.49
SDCBP-211ENST00000523441 PM20D1Q6GTS8 502 aa12.02□□□□□ -0.49
SDCBP-211ENST00000523441 OR6B2Q6IFH4 312 aa12.02□□□□□ -0.49
SDCBP-211ENST00000523441 UNC45BQ8IWX7 931 aa12.02□□□□□ -0.49
SDCBP-211ENST00000523441 LGI2Q8N0V4 545 aa12.02□□□□□ -0.49
SDCBP-211ENST00000523441 CACTIN-AS1Q8N1I8 211 aa12.02□□□□□ -0.49
SDCBP-211ENST00000523441 LINC00301Q8NCQ3 95 aa12.02□□□□□ -0.49
SDCBP-211ENST00000523441 CLEC4CQ8WTT0 213 aa12.02□□□□□ -0.49
SDCBP-211ENST00000523441 SEMA4DQ92854 862 aa12.02□□□□□ -0.49
SDCBP-211ENST00000523441 EEF2KMTQ96G04 330 aa12.02□□□□□ -0.49
SDCBP-211ENST00000523441 LMLNQ96KR4 655 aa12.02□□□□□ -0.49
SDCBP-211ENST00000523441 NOX5Q96PH1 765 aa12.02□□□□□ -0.49
SDCBP-211ENST00000523441 MIS12Q9H081 205 aa12.02□□□□□ -0.49
SDCBP-211ENST00000523441 SERTAD1Q9UHV2 236 aa12.02□□□□□ -0.49
SDCBP-211ENST00000523441 STOML2Q9UJZ1 356 aa12.02□□□□□ -0.49
SDCBP-211ENST00000523441 SARDHQ9UL12 918 aa12.02□□□□□ -0.49
SDCBP-211ENST00000523441 DOPEY2Q9Y3R5 2298 aa12.02□□□□□ -0.49
SDCBP-211ENST00000523441 PVALEFA0A1B0GWK0 134 aa12.01□□□□□ -0.49
SDCBP-211ENST00000523441 A0A1W2PNU3 283 aaPredicted RBP12.01□□□□□ -0.49
SDCBP-211ENST00000523441 PRAMEF26H0Y7S4 382 aa12.01□□□□□ -0.49
SDCBP-211ENST00000523441 K7ENP7 123 aa12.01□□□□□ -0.49
SDCBP-211ENST00000523441 LATO43561 262 aa12.01□□□□□ -0.49
SDCBP-211ENST00000523441 CALUO43852 315 aaPredicted RBP12.01□□□□□ -0.49
SDCBP-211ENST00000523441 CUTAO60888 179 aa12.01□□□□□ -0.49
SDCBP-211ENST00000523441 PIAS2O75928 621 aa12.01□□□□□ -0.49
SDCBP-211ENST00000523441 LUC7L3O95232 432 aaKnown RBP12.01□□□□□ -0.49
SDCBP-211ENST00000523441 LATS1O95835 1130 aa12.01□□□□□ -0.49
SDCBP-211ENST00000523441 CALCAP01258 141 aa12.01□□□□□ -0.49
SDCBP-211ENST00000523441 SRPRAP08240 638 aaKnown RBP12.01□□□□□ -0.49
SDCBP-211ENST00000523441 CKMT1AP12532 417 aa12.01□□□□□ -0.49
SDCBP-211ENST00000523441 PDGFRAP16234 1089 aa12.01□□□□□ -0.49
SDCBP-211ENST00000523441 NR2F2P24468 414 aa12.01□□□□□ -0.49
SDCBP-211ENST00000523441 NNMTP40261 264 aa12.01□□□□□ -0.49
SDCBP-211ENST00000523441 NASPP49321 788 aaPredicted RBP12.01□□□□□ -0.49
SDCBP-211ENST00000523441 DAOAP59103 153 aa12.01□□□□□ -0.49
SDCBP-211ENST00000523441 BST2Q10589 180 aaKnown RBP12.01□□□□□ -0.49
SDCBP-211ENST00000523441 KCNMA1Q12791 1236 aa12.01□□□□□ -0.49
SDCBP-211ENST00000523441 ISXQ2M1V0 245 aa12.01□□□□□ -0.49
SDCBP-211ENST00000523441 NUGGCQ68CJ6 796 aa12.01□□□□□ -0.49
SDCBP-211ENST00000523441 ARHGAP17Q68EM7 881 aa12.01□□□□□ -0.49
SDCBP-211ENST00000523441 CNNM4Q6P4Q7 775 aa12.01□□□□□ -0.49
SDCBP-211ENST00000523441 INO80CQ6PI98 192 aaPredicted RBP12.01□□□□□ -0.49
SDCBP-211ENST00000523441 EFL1Q7Z2Z2 1120 aaKnown RBP12.01□□□□□ -0.49
SDCBP-211ENST00000523441 CHSY1Q86X52 802 aa12.01□□□□□ -0.49
SDCBP-211ENST00000523441 JAMLQ86YT9 394 aa12.01□□□□□ -0.49
SDCBP-211ENST00000523441 FAM186BQ8IYM0 893 aa12.01□□□□□ -0.49
SDCBP-211ENST00000523441 CEP57L1Q8IYX8 460 aa12.01□□□□□ -0.49
SDCBP-211ENST00000523441 OR13H1Q8NG92 308 aa12.01□□□□□ -0.49
SDCBP-211ENST00000523441 OR8D1Q8WZ84 308 aa12.01□□□□□ -0.49
SDCBP-211ENST00000523441 EXTL1Q92935 676 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms