RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 SNX19Q92543 992 aa11.23□□□□□ -0.61
PVT1-216ENST00000523068 PGAP3Q96FM1 320 aaPredicted RBP11.23□□□□□ -0.61
PVT1-216ENST00000523068 CNTNAP3BQ96NU0 1288 aa11.23□□□□□ -0.61
PVT1-216ENST00000523068 SPAG5Q96R06 1193 aa11.23□□□□□ -0.61
PVT1-216ENST00000523068 CNTNAP3Q9BZ76 1288 aa11.23□□□□□ -0.61
PVT1-216ENST00000523068 FSCN3Q9NQT6 498 aa11.23□□□□□ -0.61
PVT1-216ENST00000523068 EIF2B4Q9UI10 523 aaKnown RBP11.23□□□□□ -0.61
PVT1-216ENST00000523068 VANGL2Q9ULK5 521 aa11.23□□□□□ -0.61
PVT1-216ENST00000523068 HS3ST4Q9Y661 456 aa11.23□□□□□ -0.61
PVT1-216ENST00000523068 PLXNA2O75051 1894 aa11.23□□□□□ -0.61
PVT1-216ENST00000523068 TMEM131Q92545 1883 aa11.23□□□□□ -0.61
PVT1-216ENST00000523068 NUMA1Q14980 2115 aa11.23□□□□□ -0.61
PVT1-216ENST00000523068 CNOT1A5YKK6 2376 aaKnown RBP11.23□□□□□ -0.61
PVT1-216ENST00000523068 NCOR2Q9Y618 2525 aa11.23□□□□□ -0.61
PVT1-216ENST00000523068 SPTBN2O15020 2390 aa11.22□□□□□ -0.61
PVT1-216ENST00000523068 GFPT2O94808 682 aa11.22□□□□□ -0.61
PVT1-216ENST00000523068 CER1O95813 267 aa11.22□□□□□ -0.61
PVT1-216ENST00000523068 ADH1BP00325 375 aa11.22□□□□□ -0.61
PVT1-216ENST00000523068 MMEP08473 750 aa11.22□□□□□ -0.61
PVT1-216ENST00000523068 PDGFRAP16234 1089 aa11.22□□□□□ -0.61
PVT1-216ENST00000523068 CDK11BP21127 795 aaKnown RBP11.22□□□□□ -0.61
PVT1-216ENST00000523068 SOX5P35711 763 aa11.22□□□□□ -0.61
PVT1-216ENST00000523068 CTSOP43234 321 aaPredicted RBP11.22□□□□□ -0.61
PVT1-216ENST00000523068 CXCR3P49682 368 aa11.22□□□□□ -0.61
PVT1-216ENST00000523068 VASPP50552 380 aaPredicted RBP11.22□□□□□ -0.61
PVT1-216ENST00000523068 AFF3P51826 1226 aaKnown RBP11.22□□□□□ -0.61
PVT1-216ENST00000523068 CDH4P55283 916 aa11.22□□□□□ -0.61
PVT1-216ENST00000523068 POLR2FP61218 127 aaKnown RBP11.22□□□□□ -0.61
PVT1-216ENST00000523068 CDR2Q01850 454 aa11.22□□□□□ -0.61
PVT1-216ENST00000523068 MYL5Q02045 173 aa11.22□□□□□ -0.61
PVT1-216ENST00000523068 GRIK2Q13002 908 aa11.22□□□□□ -0.61
PVT1-216ENST00000523068 CST6Q15828 149 aa11.22□□□□□ -0.61
PVT1-216ENST00000523068 C5orf22Q49AR2 442 aa11.22□□□□□ -0.61
PVT1-216ENST00000523068 C9orf64Q5T6V5 341 aa11.22□□□□□ -0.61
PVT1-216ENST00000523068 LRRC31Q6UY01 552 aa11.22□□□□□ -0.61
PVT1-216ENST00000523068 ARCQ7LC44 396 aa11.22□□□□□ -0.61
PVT1-216ENST00000523068 PIP4P1Q86T03 277 aa11.22□□□□□ -0.61
PVT1-216ENST00000523068 CIR1Q86X95 450 aaPredicted RBP11.22□□□□□ -0.61
PVT1-216ENST00000523068 XYLT1Q86Y38 959 aa11.22□□□□□ -0.61
PVT1-216ENST00000523068 GANCQ8TET4 914 aa11.22□□□□□ -0.61
PVT1-216ENST00000523068 IGSF8Q969P0 613 aa11.22□□□□□ -0.61
PVT1-216ENST00000523068 NT5C3BQ969T7 300 aa11.22□□□□□ -0.61
PVT1-216ENST00000523068 RPL10LQ96L21 214 aaKnown RBP11.22□□□□□ -0.61
PVT1-216ENST00000523068 OMDQ99983 421 aa11.22□□□□□ -0.61
PVT1-216ENST00000523068 TKTL2Q9H0I9 626 aa11.22□□□□□ -0.61
PVT1-216ENST00000523068 SIK2Q9H0K1 926 aa11.22□□□□□ -0.61
PVT1-216ENST00000523068 GANQ9H2C0 597 aa11.22□□□□□ -0.61
PVT1-216ENST00000523068 PABPC3Q9H361 631 aaKnown RBP11.22□□□□□ -0.61
PVT1-216ENST00000523068 MTG2Q9H4K7 406 aa11.22□□□□□ -0.61
PVT1-216ENST00000523068 C6orf106Q9H6K1 298 aaPredicted RBP11.22□□□□□ -0.61
PVT1-216ENST00000523068 PIGVQ9NUD9 493 aa11.22□□□□□ -0.61
PVT1-216ENST00000523068 FANCLQ9NW38 375 aa11.22□□□□□ -0.61
PVT1-216ENST00000523068 FBXL12Q9NXK8 326 aa11.22□□□□□ -0.61
PVT1-216ENST00000523068 ARHGEF38Q9NXL2 777 aa11.22□□□□□ -0.61
PVT1-216ENST00000523068 SLCO3A1Q9UIG8 710 aa11.22□□□□□ -0.61
PVT1-216ENST00000523068 SLC25A13Q9UJS0 675 aa11.22□□□□□ -0.61
PVT1-216ENST00000523068 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.22□□□□□ -0.61
PVT1-216ENST00000523068 LRRC72A6NJI9 287 aa11.21□□□□□ -0.61
PVT1-216ENST00000523068 SMTNL1A8MU46 457 aa11.21□□□□□ -0.61
PVT1-216ENST00000523068 TTC34A8MYJ7 566 aa11.21□□□□□ -0.61
PVT1-216ENST00000523068 MID1O15344 667 aa11.21□□□□□ -0.61
PVT1-216ENST00000523068 ADCY5O95622 1261 aa11.21□□□□□ -0.61
PVT1-216ENST00000523068 C5AR1P21730 350 aa11.21□□□□□ -0.61
PVT1-216ENST00000523068 MZF1P28698 734 aaPredicted RBP11.21□□□□□ -0.61
PVT1-216ENST00000523068 SLC8A1P32418 973 aa11.21□□□□□ -0.61
PVT1-216ENST00000523068 RDXP35241 583 aaKnown RBP11.21□□□□□ -0.61
PVT1-216ENST00000523068 STAT1P42224 750 aa11.21□□□□□ -0.61
PVT1-216ENST00000523068 COPB1P53618 953 aaKnown RBP11.21□□□□□ -0.61
PVT1-216ENST00000523068 JAM2P57087 298 aa11.21□□□□□ -0.61
PVT1-216ENST00000523068 NOMO3P69849 1222 aa11.21□□□□□ -0.61
PVT1-216ENST00000523068 CENPCQ03188 943 aa11.21□□□□□ -0.61
PVT1-216ENST00000523068 ELAVL3Q14576 367 aaKnown RBP11.21□□□□□ -0.61
PVT1-216ENST00000523068 TEAD4Q15561 434 aa11.21□□□□□ -0.61
PVT1-216ENST00000523068 OTUD1Q5VV17 481 aaPredicted RBP11.21□□□□□ -0.61
PVT1-216ENST00000523068 NAA35Q5VZE5 725 aa11.21□□□□□ -0.61
PVT1-216ENST00000523068 CXorf57Q6NSI4 855 aaKnown RBP11.21□□□□□ -0.61
PVT1-216ENST00000523068 TRIM72Q6ZMU5 477 aa11.21□□□□□ -0.61
PVT1-216ENST00000523068 DSG4Q86SJ6 1040 aa11.21□□□□□ -0.61
PVT1-216ENST00000523068 MMAAQ8IVH4 418 aaKnown RBP11.21□□□□□ -0.61
PVT1-216ENST00000523068 C1orf216Q8TAB5 229 aa11.21□□□□□ -0.61
PVT1-216ENST00000523068 CPA5Q8WXQ8 436 aa11.21□□□□□ -0.61
PVT1-216ENST00000523068 C1orf74Q96LT6 269 aa11.21□□□□□ -0.61
PVT1-216ENST00000523068 PCMTD1Q96MG8 357 aaPredicted RBP11.21□□□□□ -0.61
PVT1-216ENST00000523068 FEM1AQ9BSK4 669 aa11.21□□□□□ -0.61
PVT1-216ENST00000523068 OSGEPQ9NPF4 335 aa11.21□□□□□ -0.61
PVT1-216ENST00000523068 FAM207AQ9NSI2 230 aaPredicted RBP11.21□□□□□ -0.61
PVT1-216ENST00000523068 LIMA1Q9UHB6 759 aaKnown RBP11.21□□□□□ -0.61
PVT1-216ENST00000523068 ADAMTS1Q9UHI8 967 aa11.21□□□□□ -0.61
PVT1-216ENST00000523068 VPS28Q9UK41 221 aa11.21□□□□□ -0.61
PVT1-216ENST00000523068 FZD4Q9ULV1 537 aa11.21□□□□□ -0.61
PVT1-216ENST00000523068 TPX2Q9ULW0 747 aaKnown RBP11.21□□□□□ -0.61
PVT1-216ENST00000523068 TBC1D30Q9Y2I9 924 aa11.21□□□□□ -0.61
PVT1-216ENST00000523068 PCNX2A6NKB5 2137 aa11.21□□□□□ -0.62
PVT1-216ENST00000523068 GOLGA8SH3BPF8 625 aa11.2□□□□□ -0.62
PVT1-216ENST00000523068 GJB3O75712 270 aa11.2□□□□□ -0.62
PVT1-216ENST00000523068 RNASEH2AO75792 299 aaKnown RBP11.2□□□□□ -0.62
PVT1-216ENST00000523068 FSBPO95073 299 aa11.2□□□□□ -0.62
PVT1-216ENST00000523068 IL1BP01584 269 aa11.2□□□□□ -0.62
PVT1-216ENST00000523068 CYP1A1P04798 512 aaPredicted RBP11.2□□□□□ -0.62
PVT1-216ENST00000523068 ZNF883P0CG24 379 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms