RNA–Protein interactions for RNA: ENST00000522855.5

SKP1-210, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SKP1, Length 802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-210ENST00000522855 DNAJC16Q9Y2G8 782 aa4.81□□□□□ -1.64
SKP1-210ENST00000522855 TMEM98Q9Y2Y6 226 aa4.81□□□□□ -1.64
SKP1-210ENST00000522855 COPG1Q9Y678 874 aaKnown RBP4.81□□□□□ -1.64
SKP1-210ENST00000522855 SIRT4Q9Y6E7 314 aaPredicted RBP4.81□□□□□ -1.64
SKP1-210ENST00000522855 A2MP01023 1474 aa4.81□□□□□ -1.64
SKP1-210ENST00000522855 CLTCL1P53675 1640 aa4.8□□□□□ -1.64
SKP1-210ENST00000522855 CYP3A7-CYP3A51PA0A087WV96 503 aa4.8□□□□□ -1.64
SKP1-210ENST00000522855 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.8□□□□□ -1.64
SKP1-210ENST00000522855 AGAP5A6NIR3 686 aa4.8□□□□□ -1.64
SKP1-210ENST00000522855 STX16-NPEPL1H3BU86 382 aa4.8□□□□□ -1.64
SKP1-210ENST00000522855 CLIC1O00299 241 aa4.8□□□□□ -1.64
SKP1-210ENST00000522855 STX16O14662 325 aa4.8□□□□□ -1.64
SKP1-210ENST00000522855 CHRM5P08912 532 aaPredicted RBP4.8□□□□□ -1.64
SKP1-210ENST00000522855 IGFBP2P18065 325 aa4.8□□□□□ -1.64
SKP1-210ENST00000522855 CYP3A7P24462 503 aa4.8□□□□□ -1.64
SKP1-210ENST00000522855 FOXL2P58012 376 aa4.8□□□□□ -1.64
SKP1-210ENST00000522855 GPR162Q16538 588 aa4.8□□□□□ -1.64
SKP1-210ENST00000522855 ZNF484Q5JVG2 852 aa4.8□□□□□ -1.64
SKP1-210ENST00000522855 NAA35Q5VZE5 725 aa4.8□□□□□ -1.64
SKP1-210ENST00000522855 KYAT3Q6YP21 454 aaKnown RBP4.8□□□□□ -1.64
SKP1-210ENST00000522855 BBS12Q6ZW61 710 aa4.8□□□□□ -1.64
SKP1-210ENST00000522855 TMTC1Q8IUR5 882 aa4.8□□□□□ -1.64
SKP1-210ENST00000522855 LAS2Q8IYD9 372 aa4.8□□□□□ -1.64
SKP1-210ENST00000522855 C16orf71Q8IYS4 520 aaPredicted RBP4.8□□□□□ -1.64
SKP1-210ENST00000522855 AFAP1Q8N556 730 aa4.8□□□□□ -1.64
SKP1-210ENST00000522855 ESX1Q8N693 406 aa4.8□□□□□ -1.64
SKP1-210ENST00000522855 ENDOVQ8N8Q3 282 aaKnown RBP4.8□□□□□ -1.64
SKP1-210ENST00000522855 ADAMTS18Q8TE60 1221 aa4.8□□□□□ -1.64
SKP1-210ENST00000522855 MPP4Q96JB8 637 aa4.8□□□□□ -1.64
SKP1-210ENST00000522855 NPAS1Q99742 590 aa4.8□□□□□ -1.64
SKP1-210ENST00000522855 MACROD1Q9BQ69 325 aa4.8□□□□□ -1.64
SKP1-210ENST00000522855 MAF1Q9H063 256 aa4.8□□□□□ -1.64
SKP1-210ENST00000522855 ZHX3Q9H4I2 956 aa4.8□□□□□ -1.64
SKP1-210ENST00000522855 SYNPO2LQ9H987 977 aa4.8□□□□□ -1.64
SKP1-210ENST00000522855 PRDM16Q9HAZ2 1276 aa4.8□□□□□ -1.64
SKP1-210ENST00000522855 PLEKHA2Q9HB19 425 aa4.8□□□□□ -1.64
SKP1-210ENST00000522855 ASIC5Q9NY37 505 aa4.8□□□□□ -1.64
SKP1-210ENST00000522855 GDAQ9Y2T3 454 aa4.8□□□□□ -1.64
SKP1-210ENST00000522855 PCDHA10Q9Y5I2 948 aa4.8□□□□□ -1.64
SKP1-210ENST00000522855 C3P01024 1663 aa4.8□□□□□ -1.64
SKP1-210ENST00000522855 RIMS1Q86UR5 1692 aaKnown RBP4.8□□□□□ -1.64
SKP1-210ENST00000522855 HMGB1P1B2RPK0 211 aaPredicted RBP4.79□□□□□ -1.64
SKP1-210ENST00000522855 TARM1B6A8C7 271 aa4.79□□□□□ -1.64
SKP1-210ENST00000522855 POC1B-GALNT4F8VUJ3 575 aa4.79□□□□□ -1.64
SKP1-210ENST00000522855 EPB41L2O43491 1005 aaKnown RBP4.79□□□□□ -1.64
SKP1-210ENST00000522855 CCNT1O60563 726 aaKnown RBP4.79□□□□□ -1.64
SKP1-210ENST00000522855 RNF8O76064 485 aa4.79□□□□□ -1.64
SKP1-210ENST00000522855 CYP21A2P08686 494 aa4.79□□□□□ -1.64
SKP1-210ENST00000522855 IFIT1P09914 478 aaKnown RBP4.79□□□□□ -1.64
SKP1-210ENST00000522855 HOXD12P35452 270 aa4.79□□□□□ -1.64
SKP1-210ENST00000522855 AGTR2P50052 363 aa4.79□□□□□ -1.64
SKP1-210ENST00000522855 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.79□□□□□ -1.64
SKP1-210ENST00000522855 MAPK7Q13164 816 aa4.79□□□□□ -1.64
SKP1-210ENST00000522855 THOC5Q13769 683 aaKnown RBP4.79□□□□□ -1.64
SKP1-210ENST00000522855 DLGAP5Q15398 846 aa4.79□□□□□ -1.64
SKP1-210ENST00000522855 PFKFB3Q16875 520 aaPredicted RBP4.79□□□□□ -1.64
SKP1-210ENST00000522855 RUNDC3AQ59EK9 446 aa4.79□□□□□ -1.64
SKP1-210ENST00000522855 ATG16L1Q676U5 607 aa4.79□□□□□ -1.64
SKP1-210ENST00000522855 AMIGO2Q86SJ2 522 aa4.79□□□□□ -1.64
SKP1-210ENST00000522855 GALNT4Q8N4A0 578 aa4.79□□□□□ -1.64
SKP1-210ENST00000522855 ARRDC3Q96B67 414 aa4.79□□□□□ -1.64
SKP1-210ENST00000522855 RBM17Q96I25 401 aaKnown RBP4.79□□□□□ -1.64
SKP1-210ENST00000522855 KAZALD1Q96I82 304 aa4.79□□□□□ -1.64
SKP1-210ENST00000522855 ZNF845Q96IR2 970 aaPredicted RBP4.79□□□□□ -1.64
SKP1-210ENST00000522855 GPR63Q9BZJ6 419 aa4.79□□□□□ -1.64
SKP1-210ENST00000522855 SFXN1Q9H9B4 322 aa4.79□□□□□ -1.64
SKP1-210ENST00000522855 ERVK-5Q9HDB9 667 aa4.79□□□□□ -1.64
SKP1-210ENST00000522855 UBN1Q9NPG3 1134 aa4.79□□□□□ -1.64
SKP1-210ENST00000522855 ARL8BQ9NVJ2 186 aa4.79□□□□□ -1.64
SKP1-210ENST00000522855 ASNSD1Q9NWL6 643 aa4.79□□□□□ -1.64
SKP1-210ENST00000522855 ASB6Q9NWX5 421 aa4.79□□□□□ -1.64
SKP1-210ENST00000522855 SEMA5BQ9P283 1151 aa4.79□□□□□ -1.64
SKP1-210ENST00000522855 INSL6Q9Y581 213 aa4.79□□□□□ -1.64
SKP1-210ENST00000522855 YEATS2Q9ULM3 1422 aa4.79□□□□□ -1.64
SKP1-210ENST00000522855 PIK3C2BO00750 1634 aa4.79□□□□□ -1.64
SKP1-210ENST00000522855 ABCC3O15438 1527 aa4.78□□□□□ -1.64
SKP1-210ENST00000522855 TRPM2O94759 1503 aa4.78□□□□□ -1.64
SKP1-210ENST00000522855 VWA3AA6NCI4 1184 aa4.78□□□□□ -1.64
SKP1-210ENST00000522855 TMEM232C9JQI7 657 aa4.78□□□□□ -1.64
SKP1-210ENST00000522855 J3KRW8 73 aa4.78□□□□□ -1.64
SKP1-210ENST00000522855 GRM8O00222 908 aa4.78□□□□□ -1.64
SKP1-210ENST00000522855 ANP32CO43423 234 aa4.78□□□□□ -1.64
SKP1-210ENST00000522855 CSF1P09603 554 aa4.78□□□□□ -1.64
SKP1-210ENST00000522855 CHN1P15882 459 aa4.78□□□□□ -1.64
SKP1-210ENST00000522855 FBLP22087 321 aaKnown RBP4.78□□□□□ -1.64
SKP1-210ENST00000522855 KRT9P35527 623 aa4.78□□□□□ -1.64
SKP1-210ENST00000522855 VPS41P49754 854 aa4.78□□□□□ -1.64
SKP1-210ENST00000522855 OAZ1P54368 228 aa4.78□□□□□ -1.64
SKP1-210ENST00000522855 SLC4A8Q2Y0W8 1093 aa4.78□□□□□ -1.64
SKP1-210ENST00000522855 ANO7Q6IWH7 933 aa4.78□□□□□ -1.64
SKP1-210ENST00000522855 DENND1BQ6P3S1 775 aa4.78□□□□□ -1.64
SKP1-210ENST00000522855 DNAJC10Q8IXB1 793 aa4.78□□□□□ -1.64
SKP1-210ENST00000522855 HTRA1Q92743 480 aa4.78□□□□□ -1.64
SKP1-210ENST00000522855 REPS1Q96D71 796 aa4.78□□□□□ -1.64
SKP1-210ENST00000522855 PPP1R10Q96QC0 940 aaKnown RBP4.78□□□□□ -1.64
SKP1-210ENST00000522855 REEP2Q9BRK0 252 aa4.78□□□□□ -1.64
SKP1-210ENST00000522855 NUAK2Q9H093 628 aa4.78□□□□□ -1.64
SKP1-210ENST00000522855 KLK15Q9H2R5 256 aa4.78□□□□□ -1.64
SKP1-210ENST00000522855 IL17RBQ9NRM6 502 aa4.78□□□□□ -1.64
SKP1-210ENST00000522855 TMEM160Q9NX00 188 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms