RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 DHFR2Q86XF0 187 aa14.08□□□□□ -0.16
SYNPO-205ENST00000522122 TBC1D19Q8N5T2 526 aa14.08□□□□□ -0.16
SYNPO-205ENST00000522122 HASPINQ8TF76 798 aa14.08□□□□□ -0.16
SYNPO-205ENST00000522122 RMND5AQ9H871 391 aa14.08□□□□□ -0.16
SYNPO-205ENST00000522122 RHBDL2Q9NX52 303 aa14.08□□□□□ -0.16
SYNPO-205ENST00000522122 ERVK-10P10266 1014 aa14.08□□□□□ -0.16
SYNPO-205ENST00000522122 RNASEH2BQ5TBB1 312 aaKnown RBP14.08□□□□□ -0.16
SYNPO-205ENST00000522122 TAF2Q6P1X5 1199 aa14.08□□□□□ -0.16
SYNPO-205ENST00000522122 ADGRD1Q6QNK2 874 aa14.08□□□□□ -0.16
SYNPO-205ENST00000522122 ZNF410Q86VK4 478 aa14.08□□□□□ -0.16
SYNPO-205ENST00000522122 BBS7Q8IWZ6 715 aa14.08□□□□□ -0.16
SYNPO-205ENST00000522122 BCAS3Q9H6U6 928 aa14.08□□□□□ -0.16
SYNPO-205ENST00000522122 XPNPEP3Q9NQH7 507 aa14.08□□□□□ -0.16
SYNPO-205ENST00000522122 SLC17A7Q9P2U7 560 aa14.08□□□□□ -0.16
SYNPO-205ENST00000522122 TNFAIP8O95379 198 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 TRUB2O95900 331 aaKnown RBP14.07□□□□□ -0.16
SYNPO-205ENST00000522122 ATP6V1B2P21281 511 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 RGS2P41220 211 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 NUMBP49757 651 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 POLD3Q15054 466 aaPredicted RBP14.07□□□□□ -0.16
SYNPO-205ENST00000522122 SCARA3Q6AZY7 606 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 OVOS1Q6IE37 1185 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 CENPLQ8N0S6 344 aaPredicted RBP14.07□□□□□ -0.16
SYNPO-205ENST00000522122 CYP4X1Q8N118 509 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 DNAJB3Q8WWF6 145 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 FETUBQ9UGM5 382 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 CHKBQ9Y259 395 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 TPP1O14773 563 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 ITGALP20701 1170 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 PRIM2P49643 509 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 RAD23AP54725 363 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 POU5F1Q01860 360 aaKnown RBP14.07□□□□□ -0.16
SYNPO-205ENST00000522122 NR6A1Q15406 480 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 TJAP1Q5JTD0 557 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 NKD2Q969F2 451 aaPredicted RBP14.07□□□□□ -0.16
SYNPO-205ENST00000522122 GPR88Q9GZN0 384 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 ATXN3LQ9H3M9 355 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 POPDC2Q9HBU9 364 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 NMRK2Q9NPI5 230 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 POLG2Q9UHN1 485 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 TNFSF13BQ9Y275 285 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 NDUFAF1Q9Y375 327 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 PCDHA11Q9Y5I1 949 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 CNTNAP2Q9UHC6 1331 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 ECM29Q5VYK3 1845 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 BIRC5O15392 142 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 GSC2O15499 205 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 TBC1D12O60347 775 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 PIAS1O75925 651 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 MYL4P12829 197 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 FOXN2P32314 431 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 NOS2P35228 1153 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 ZNF135P52742 658 aaPredicted RBP14.07□□□□□ -0.16
SYNPO-205ENST00000522122 ROR2Q01974 943 aaKnown RBP14.07□□□□□ -0.16
SYNPO-205ENST00000522122 CYP51A1Q16850 503 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 CTXN3Q4LDR2 81 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 DEPDC1Q5TB30 811 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 ARCQ7LC44 396 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 UNC93AQ86WB7 457 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 PYDC1Q8WXC3 89 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 USP6NLQ92738 828 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 PLEKHA8Q96JA3 519 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 SNRNP25Q9BV90 132 aaKnown RBP14.07□□□□□ -0.16
SYNPO-205ENST00000522122 STN1Q9H668 368 aaKnown RBP14.07□□□□□ -0.16
SYNPO-205ENST00000522122 ETAA1Q9NY74 926 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 CCDC167Q9P0B6 97 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 TUBGCP4Q9UGJ1 667 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 PCDHB7Q9Y5E2 793 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 UNGP13051 313 aaPredicted RBP14.07□□□□□ -0.16
SYNPO-205ENST00000522122 TUBP50607 506 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 SCNN1BP51168 640 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 STX19Q8N4C7 294 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 SPOCK2Q92563 424 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 CD101Q93033 1021 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 GLIS2Q9BZE0 524 aaPredicted RBP14.07□□□□□ -0.16
SYNPO-205ENST00000522122 SCUBE2Q9NQ36 999 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 LNPEPQ9UIQ6 1025 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 EFR3BQ9Y2G0 817 aa14.07□□□□□ -0.16
SYNPO-205ENST00000522122 RPL14P50914 215 aaKnown RBP14.06□□□□□ -0.16
SYNPO-205ENST00000522122 SLC18A1P54219 525 aa14.06□□□□□ -0.16
SYNPO-205ENST00000522122 NAGLUP54802 743 aa14.06□□□□□ -0.16
SYNPO-205ENST00000522122 ANKS6Q68DC2 871 aa14.06□□□□□ -0.16
SYNPO-205ENST00000522122 LLGL2Q6P1M3 1020 aa14.06□□□□□ -0.16
SYNPO-205ENST00000522122 PSTKQ8IV42 348 aaKnown RBP14.06□□□□□ -0.16
SYNPO-205ENST00000522122 B4GALNT2Q8NHY0 566 aa14.06□□□□□ -0.16
SYNPO-205ENST00000522122 C10orf82Q8WW14 230 aa14.06□□□□□ -0.16
SYNPO-205ENST00000522122 SMARCD1Q96GM5 515 aa14.06□□□□□ -0.16
SYNPO-205ENST00000522122 NSMCE2Q96MF7 247 aa14.06□□□□□ -0.16
SYNPO-205ENST00000522122 SLC25A23Q9BV35 468 aa14.06□□□□□ -0.16
SYNPO-205ENST00000522122 COQ4Q9Y3A0 265 aa14.06□□□□□ -0.16
SYNPO-205ENST00000522122 PHGDHO43175 533 aaKnown RBP14.06□□□□□ -0.16
SYNPO-205ENST00000522122 RAMP2O60895 175 aa14.06□□□□□ -0.16
SYNPO-205ENST00000522122 SERPINA6P08185 405 aa14.06□□□□□ -0.16
SYNPO-205ENST00000522122 CCDC130P13994 396 aa14.06□□□□□ -0.16
SYNPO-205ENST00000522122 SOAT1P35610 550 aa14.06□□□□□ -0.16
SYNPO-205ENST00000522122 ALDH7A1P49419 539 aaKnown RBP14.06□□□□□ -0.16
SYNPO-205ENST00000522122 NUDT18Q6ZVK8 323 aa14.06□□□□□ -0.16
SYNPO-205ENST00000522122 TRIM69Q86WT6 500 aa14.06□□□□□ -0.16
SYNPO-205ENST00000522122 WNT8BQ93098 351 aa14.06□□□□□ -0.16
SYNPO-205ENST00000522122 RMND5BQ96G75 393 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms