RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 SKIV2LQ15477 1246 aaKnown RBP21.93■■□□□ 1.1
R3HCC1-208ENST00000522012 TRIP13Q15645 432 aaPredicted RBP21.93■■□□□ 1.1
R3HCC1-208ENST00000522012 ELF2Q15723 593 aa21.93■■□□□ 1.1
R3HCC1-208ENST00000522012 MPPE1Q53F39 396 aa21.93■■□□□ 1.1
R3HCC1-208ENST00000522012 AFMIDQ63HM1 303 aa21.93■■□□□ 1.1
R3HCC1-208ENST00000522012 SMRP1Q8NCR6 262 aa21.93■■□□□ 1.1
R3HCC1-208ENST00000522012 ST13P5Q8NFI4 369 aaPredicted RBP21.93■■□□□ 1.1
R3HCC1-208ENST00000522012 LRRC3BQ96PB8 259 aa21.93■■□□□ 1.1
R3HCC1-208ENST00000522012 LINC00597Q9H2U6 94 aa21.93■■□□□ 1.1
R3HCC1-208ENST00000522012 ANKZF1Q9H8Y5 726 aa21.93■■□□□ 1.1
R3HCC1-208ENST00000522012 UTP11Q9Y3A2 253 aaKnown RBP21.93■■□□□ 1.1
R3HCC1-208ENST00000522012 WNT6Q9Y6F9 365 aa21.93■■□□□ 1.1
R3HCC1-208ENST00000522012 SLC9A3R1O14745 358 aaPredicted RBP21.92■■□□□ 1.1
R3HCC1-208ENST00000522012 RAMP2O60895 175 aa21.92■■□□□ 1.1
R3HCC1-208ENST00000522012 KRT14P02533 472 aa21.92■■□□□ 1.1
R3HCC1-208ENST00000522012 CYBBP04839 570 aa21.92■■□□□ 1.1
R3HCC1-208ENST00000522012 STIP1P31948 543 aaKnown RBP21.92■■□□□ 1.1
R3HCC1-208ENST00000522012 GARSP41250 739 aaKnown RBP21.92■■□□□ 1.1
R3HCC1-208ENST00000522012 GUCY2DQ02846 1103 aa21.92■■□□□ 1.1
R3HCC1-208ENST00000522012 SYDE1Q6ZW31 735 aaPredicted RBP21.92■■□□□ 1.1
R3HCC1-208ENST00000522012 PRUNE1Q86TP1 453 aa21.92■■□□□ 1.1
R3HCC1-208ENST00000522012 CARNMT1Q8N4J0 409 aa21.92■■□□□ 1.1
R3HCC1-208ENST00000522012 GPR161Q8N6U8 529 aaKnown RBP21.92■■□□□ 1.1
R3HCC1-208ENST00000522012 CCDC89Q8N998 374 aa21.92■■□□□ 1.1
R3HCC1-208ENST00000522012 PPM1EQ8WY54 764 aa21.92■■□□□ 1.1
R3HCC1-208ENST00000522012 GUCD1Q96NT3 240 aa21.92■■□□□ 1.1
R3HCC1-208ENST00000522012 NOL6Q9H6R4 1146 aaKnown RBP21.92■■□□□ 1.1
R3HCC1-208ENST00000522012 USP15Q9Y4E8 981 aaPredicted RBP21.92■■□□□ 1.1
R3HCC1-208ENST00000522012 DOCK6Q96HP0 2047 aa21.91■■□□□ 1.1
R3HCC1-208ENST00000522012 CFAP69A5D8W1 941 aa21.91■■□□□ 1.1
R3HCC1-208ENST00000522012 HEPACAM2A8MVW5 462 aa21.91■■□□□ 1.1
R3HCC1-208ENST00000522012 RASA4BC9J798 803 aa21.91■■□□□ 1.1
R3HCC1-208ENST00000522012 RASA4O43374 803 aa21.91■■□□□ 1.1
R3HCC1-208ENST00000522012 ETS1P14921 441 aa21.91■■□□□ 1.1
R3HCC1-208ENST00000522012 PAPOLAP51003 745 aaKnown RBP21.91■■□□□ 1.1
R3HCC1-208ENST00000522012 GDF10P55107 478 aa21.91■■□□□ 1.1
R3HCC1-208ENST00000522012 POLD3Q15054 466 aaPredicted RBP21.91■■□□□ 1.1
R3HCC1-208ENST00000522012 PRKD1Q15139 912 aaPredicted RBP21.91■■□□□ 1.1
R3HCC1-208ENST00000522012 C6orf118Q5T5N4 469 aa21.91■■□□□ 1.1
R3HCC1-208ENST00000522012 HEATR6Q6AI08 1181 aaKnown RBP21.91■■□□□ 1.1
R3HCC1-208ENST00000522012 ZNF354CQ86Y25 554 aa21.91■■□□□ 1.1
R3HCC1-208ENST00000522012 ATPAF2Q8N5M1 289 aa21.91■■□□□ 1.1
R3HCC1-208ENST00000522012 BPIFB1Q8TDL5 484 aa21.91■■□□□ 1.1
R3HCC1-208ENST00000522012 DEPDC1BQ8WUY9 529 aa21.91■■□□□ 1.1
R3HCC1-208ENST00000522012 NECTIN4Q96NY8 510 aa21.91■■□□□ 1.1
R3HCC1-208ENST00000522012 TRIM31Q9BZY9 425 aa21.91■■□□□ 1.1
R3HCC1-208ENST00000522012 BRD8Q9H0E9 1235 aa21.91■■□□□ 1.1
R3HCC1-208ENST00000522012 RAB17Q9H0T7 212 aa21.91■■□□□ 1.1
R3HCC1-208ENST00000522012 TRPV4Q9HBA0 871 aa21.91■■□□□ 1.1
R3HCC1-208ENST00000522012 USP29Q9HBJ7 922 aa21.91■■□□□ 1.1
R3HCC1-208ENST00000522012 ZFP14Q9HCL3 533 aa21.91■■□□□ 1.1
R3HCC1-208ENST00000522012 PRRC2BQ5JSZ5 2229 aaKnown RBP21.91■■□□□ 1.1
R3HCC1-208ENST00000522012 TARSL2A2RTX5 802 aaKnown RBP21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 ZSCAN5CA6NGD5 496 aaPredicted RBP21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 ARHGAP42A6NI28 874 aa21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 H0Y626 953 aa21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 RHOCP08134 193 aa21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 ZSCAN5DPP0CG00 497 aa21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 FOSL2P15408 326 aa21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 PPIDQ08752 370 aaKnown RBP21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 TANGO2Q6ICL3 276 aa21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 TMEM25Q86YD3 366 aa21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 HTR3CQ8WXA8 447 aa21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 HDAC11Q96DB2 347 aa21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 OTUB2Q96DC9 234 aa21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 HMCESQ96FZ2 354 aa21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 FERMT1Q9BQL6 677 aa21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 ERP44Q9BS26 406 aa21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 EPB41L5Q9HCM4 733 aa21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 DUS2Q9NX74 493 aaKnown RBP21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 OBP2AQ9NY56 170 aa21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 PLK2Q9NYY3 685 aa21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 SEPT10Q9P0V9 454 aa21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 ASIC3Q9UHC3 531 aa21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 DENND4CQ5VZ89 1909 aa21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 LUC7L3O95232 432 aaKnown RBP21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 LAMP2P13473 410 aa21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 VAV1P15498 845 aa21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 KCNA5P22460 613 aa21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 FCARP24071 287 aa21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 VPS41P49754 854 aa21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 TERF1P54274 439 aa21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 YBEYP58557 167 aaPredicted RBP21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 PTK6Q13882 451 aa21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 PARP15Q460N3 678 aa21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 MPP7Q5T2T1 576 aa21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 ARHGAP36Q6ZRI8 547 aa21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 SETD3Q86TU7 594 aaPredicted RBP21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 CCDC117Q8IWD4 279 aaPredicted RBP21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 GLIS1Q8NBF1 620 aa21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 P2RY11Q96G91 374 aa21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 DPH5Q9H2P9 285 aa21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 NEU2Q9Y3R4 380 aa21.9■■□□□ 1.1
R3HCC1-208ENST00000522012 ESYT3A0FGR9 886 aa21.89■■□□□ 1.09
R3HCC1-208ENST00000522012 IFNAR2P48551 515 aa21.89■■□□□ 1.09
R3HCC1-208ENST00000522012 NRLP54845 237 aa21.89■■□□□ 1.09
R3HCC1-208ENST00000522012 GNA12Q03113 381 aa21.89■■□□□ 1.09
R3HCC1-208ENST00000522012 MYO9BQ13459 2157 aa21.89■■□□□ 1.09
R3HCC1-208ENST00000522012 CDH18Q13634 790 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms