RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, human

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-222	ENST00000520948	CHSY1	Q86X52	802 aa		18.71	■□□□□ 0.59
VEGFA-222	ENST00000520948	ACRBP	Q8NEB7	543 aa		18.71	■□□□□ 0.59
VEGFA-222	ENST00000520948	CCDC112	Q8NEF3	446 aa		18.71	■□□□□ 0.59
VEGFA-222	ENST00000520948	DDI1	Q8WTU0	396 aa		18.71	■□□□□ 0.59
VEGFA-222	ENST00000520948	IGSF8	Q969P0	613 aa		18.71	■□□□□ 0.59
VEGFA-222	ENST00000520948	XPO6	Q96QU8	1125 aa	Known RBP	18.71	■□□□□ 0.59
VEGFA-222	ENST00000520948	PNKP	Q96T60	521 aa		18.71	■□□□□ 0.59
VEGFA-222	ENST00000520948	SIK2	Q9H0K1	926 aa		18.71	■□□□□ 0.59
VEGFA-222	ENST00000520948	TFR2	Q9UP52	801 aa		18.71	■□□□□ 0.59
VEGFA-222	ENST00000520948	ABCA7	Q8IZY2	2146 aa		18.7	■□□□□ 0.58
VEGFA-222	ENST00000520948		A0A0A6YYK5	440 aa	Predicted RBP	18.7	■□□□□ 0.58
VEGFA-222	ENST00000520948	BCLAF3	A2AJT9	711 aa	Known RBP	18.7	■□□□□ 0.58
VEGFA-222	ENST00000520948		F5H5T6	163 aa		18.7	■□□□□ 0.58
VEGFA-222	ENST00000520948	TBL1X	O60907	577 aa		18.7	■□□□□ 0.58
VEGFA-222	ENST00000520948	DES	P17661	470 aa		18.7	■□□□□ 0.58
VEGFA-222	ENST00000520948	BCKDHB	P21953	392 aa		18.7	■□□□□ 0.58
VEGFA-222	ENST00000520948	MIP	P30301	263 aa		18.7	■□□□□ 0.58
VEGFA-222	ENST00000520948	ARHGAP25	P42331	645 aa		18.7	■□□□□ 0.58
VEGFA-222	ENST00000520948	CCZ1B	P86790	482 aa		18.7	■□□□□ 0.58
VEGFA-222	ENST00000520948	CCZ1	P86791	482 aa	Predicted RBP	18.7	■□□□□ 0.58
VEGFA-222	ENST00000520948	MANEAL	Q5VSG8	457 aa		18.7	■□□□□ 0.58
VEGFA-222	ENST00000520948	SCYL2	Q6P3W7	929 aa		18.7	■□□□□ 0.58
VEGFA-222	ENST00000520948	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	18.7	■□□□□ 0.58
VEGFA-222	ENST00000520948	SFTPA1	Q8IWL2	248 aa		18.7	■□□□□ 0.58
VEGFA-222	ENST00000520948	HJURP	Q8NCD3	748 aa	Predicted RBP	18.7	■□□□□ 0.58
VEGFA-222	ENST00000520948	BHMT	Q93088	406 aa		18.7	■□□□□ 0.58
VEGFA-222	ENST00000520948	LMLN	Q96KR4	655 aa		18.7	■□□□□ 0.58
VEGFA-222	ENST00000520948	PEBP4	Q96S96	227 aa		18.7	■□□□□ 0.58
VEGFA-222	ENST00000520948	LUC7L	Q9NQ29	371 aa	Known RBP	18.7	■□□□□ 0.58
VEGFA-222	ENST00000520948	LCMT1	Q9UIC8	334 aa		18.7	■□□□□ 0.58
VEGFA-222	ENST00000520948	SLC27A6	Q9Y2P4	619 aa		18.7	■□□□□ 0.58
VEGFA-222	ENST00000520948	SNX10	Q9Y5X0	201 aa		18.7	■□□□□ 0.58
VEGFA-222	ENST00000520948	ZFHX4	Q86UP3	3567 aa		18.7	■□□□□ 0.58
VEGFA-222	ENST00000520948	LAMA1	P25391	3075 aa		18.69	■□□□□ 0.58
VEGFA-222	ENST00000520948	C4orf47	A7E2U8	309 aa		18.69	■□□□□ 0.58
VEGFA-222	ENST00000520948	BTNL10	A8MVZ5	291 aa		18.69	■□□□□ 0.58
VEGFA-222	ENST00000520948	FAM72C	H0Y354	149 aa		18.69	■□□□□ 0.58
VEGFA-222	ENST00000520948	TRIM24	O15164	1050 aa		18.69	■□□□□ 0.58
VEGFA-222	ENST00000520948	ARHGAP6	O43182	974 aa		18.69	■□□□□ 0.58
VEGFA-222	ENST00000520948	PROSC	O94903	275 aa		18.69	■□□□□ 0.58
VEGFA-222	ENST00000520948	TCF4	P15884	667 aa		18.69	■□□□□ 0.58
VEGFA-222	ENST00000520948	VAV2	P52735	878 aa		18.69	■□□□□ 0.58
VEGFA-222	ENST00000520948	KRT83	P78385	493 aa		18.69	■□□□□ 0.58
VEGFA-222	ENST00000520948	SEMA3B	Q13214	749 aa		18.69	■□□□□ 0.58
VEGFA-222	ENST00000520948	ERMARD	Q5T6L9	678 aa		18.69	■□□□□ 0.58
VEGFA-222	ENST00000520948	FAM72A	Q5TYM5	149 aa		18.69	■□□□□ 0.58
VEGFA-222	ENST00000520948	DAB2IP	Q5VWQ8	1189 aa		18.69	■□□□□ 0.58
VEGFA-222	ENST00000520948	PMS2CL	Q68D20	193 aa		18.69	■□□□□ 0.58
VEGFA-222	ENST00000520948	FAM72D	Q6L9T8	149 aa		18.69	■□□□□ 0.58
VEGFA-222	ENST00000520948	FAM72B	Q86X60	149 aa		18.69	■□□□□ 0.58
VEGFA-222	ENST00000520948	CFAP52	Q8N1V2	620 aa		18.69	■□□□□ 0.58
VEGFA-222	ENST00000520948	MDGA1	Q8NFP4	955 aa		18.69	■□□□□ 0.58
VEGFA-222	ENST00000520948	FIBIN	Q8TAL6	211 aa		18.69	■□□□□ 0.58
VEGFA-222	ENST00000520948	LACRT	Q9GZZ8	138 aa		18.69	■□□□□ 0.58
VEGFA-222	ENST00000520948	DEC1	Q9P2X7	70 aa		18.69	■□□□□ 0.58
VEGFA-222	ENST00000520948	OR12D3	Q9UGF7	316 aa		18.69	■□□□□ 0.58
VEGFA-222	ENST00000520948	SALL4	Q9UJQ4	1053 aa		18.69	■□□□□ 0.58
VEGFA-222	ENST00000520948	VANGL2	Q9ULK5	521 aa		18.69	■□□□□ 0.58
VEGFA-222	ENST00000520948	DOCK4	Q8N1I0	1966 aa		18.69	■□□□□ 0.58
VEGFA-222	ENST00000520948	USP24	Q9UPU5	2620 aa		18.69	■□□□□ 0.58
VEGFA-222	ENST00000520948	LNP1	A1A4G5	178 aa		18.68	■□□□□ 0.58
VEGFA-222	ENST00000520948	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	18.68	■□□□□ 0.58
VEGFA-222	ENST00000520948	PATE3	B3GLJ2	98 aa		18.68	■□□□□ 0.58
VEGFA-222	ENST00000520948		E9PAM4	449 aa		18.68	■□□□□ 0.58
VEGFA-222	ENST00000520948	GIPC1	O14908	333 aa		18.68	■□□□□ 0.58
VEGFA-222	ENST00000520948	CHRM1	P11229	460 aa	Predicted RBP	18.68	■□□□□ 0.58
VEGFA-222	ENST00000520948	IL1R2	P27930	398 aa		18.68	■□□□□ 0.58
VEGFA-222	ENST00000520948	GGCX	P38435	758 aa		18.68	■□□□□ 0.58
VEGFA-222	ENST00000520948	GRIA2	P42262	883 aa		18.68	■□□□□ 0.58
VEGFA-222	ENST00000520948	DGKG	P49619	791 aa		18.68	■□□□□ 0.58
VEGFA-222	ENST00000520948	IRAK1	P51617	712 aa		18.68	■□□□□ 0.58
VEGFA-222	ENST00000520948	USP39	Q53GS9	565 aa	Known RBP	18.68	■□□□□ 0.58
VEGFA-222	ENST00000520948	TTC39B	Q5VTQ0	682 aa	Predicted RBP	18.68	■□□□□ 0.58
VEGFA-222	ENST00000520948	CPNE8	Q86YQ8	564 aa		18.68	■□□□□ 0.58
VEGFA-222	ENST00000520948	PSTK	Q8IV42	348 aa	Known RBP	18.68	■□□□□ 0.58
VEGFA-222	ENST00000520948	PYROXD2	Q8N2H3	581 aa		18.68	■□□□□ 0.58
VEGFA-222	ENST00000520948	WFDC5	Q8TCV5	224 aa		18.68	■□□□□ 0.58
VEGFA-222	ENST00000520948	ANP32B	Q92688	251 aa	Known RBP	18.68	■□□□□ 0.58
VEGFA-222	ENST00000520948	ZDHHC4	Q9NPG8	344 aa		18.68	■□□□□ 0.58
VEGFA-222	ENST00000520948	DNAJC17	Q9NVM6	304 aa	Known RBP	18.68	■□□□□ 0.58
VEGFA-222	ENST00000520948	PPARGC1A	Q9UBK2	798 aa	Known RBP	18.68	■□□□□ 0.58
VEGFA-222	ENST00000520948	PCSK1N	Q9UHG2	260 aa		18.68	■□□□□ 0.58
VEGFA-222	ENST00000520948	MMP17	Q9ULZ9	603 aa		18.68	■□□□□ 0.58
VEGFA-222	ENST00000520948	ADGRG1	Q9Y653	693 aa		18.68	■□□□□ 0.58
VEGFA-222	ENST00000520948	KAT7	O95251	611 aa		18.67	■□□□□ 0.58
VEGFA-222	ENST00000520948	IPO7	O95373	1038 aa	Known RBP	18.67	■□□□□ 0.58
VEGFA-222	ENST00000520948	HNRNPL	P14866	589 aa	Known RBP eCLIP	18.67	■□□□□ 0.58
VEGFA-222	ENST00000520948	L1CAM	P32004	1257 aa		18.67	■□□□□ 0.58
VEGFA-222	ENST00000520948	MAN1A1	P33908	653 aa		18.67	■□□□□ 0.58
VEGFA-222	ENST00000520948	TNFRSF4	P43489	277 aa		18.67	■□□□□ 0.58
VEGFA-222	ENST00000520948	NOVA1	P51513	510 aa	Known RBP	18.67	■□□□□ 0.58
VEGFA-222	ENST00000520948	SHC2	P98077	582 aa		18.67	■□□□□ 0.58
VEGFA-222	ENST00000520948	SLC25A11	Q02978	314 aa	Known RBP	18.67	■□□□□ 0.58
VEGFA-222	ENST00000520948	BOLA3	Q53S33	107 aa		18.67	■□□□□ 0.58
VEGFA-222	ENST00000520948	RABGAP1L	Q5R372	815 aa		18.67	■□□□□ 0.58
VEGFA-222	ENST00000520948	GRAMD4	Q6IC98	578 aa		18.67	■□□□□ 0.58
VEGFA-222	ENST00000520948	TMEM92	Q6UXU6	159 aa		18.67	■□□□□ 0.58
VEGFA-222	ENST00000520948	CYP2U1	Q7Z449	544 aa		18.67	■□□□□ 0.58
VEGFA-222	ENST00000520948	RASSF3	Q86WH2	238 aa		18.67	■□□□□ 0.58
VEGFA-222	ENST00000520948	CCAR2	Q8N163	923 aa	Known RBP	18.67	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms