RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 TEX44Q53QW1 395 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 IL31Q6EBC2 164 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 NPWQ8N729 165 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 GIMAP7Q8NHV1 300 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 CASP10Q92851 521 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 EXT2Q93063 718 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 TSPAN18Q96SJ8 248 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 AGAP2Q99490 1192 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 TASP1Q9H6P5 420 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 ANLNQ9NQW6 1124 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 ZNF358Q9NW07 568 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 ZMYND8Q9ULU4 1186 aaPredicted RBP11.61□□□□□ -0.55
CLK4-206ENST00000520878 PCDHB5Q9Y5E4 795 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 PSAT1Q9Y617 370 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 NCAM2O15394 837 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 PHGDHO43175 533 aaKnown RBP11.61□□□□□ -0.55
CLK4-206ENST00000520878 MTSS1O43312 755 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 BUD23O43709 281 aaKnown RBP11.61□□□□□ -0.55
CLK4-206ENST00000520878 DDHD2O94830 711 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 FYNP06241 537 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 CKBP12277 381 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 ARL1P40616 181 aaPredicted RBP11.61□□□□□ -0.55
CLK4-206ENST00000520878 NCALDP61601 193 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 WASHC5Q12768 1159 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 PSMD5Q16401 504 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 EML3Q32P44 896 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 PACS1Q6VY07 963 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 DCLK2Q8N568 766 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 RRN3Q9NYV6 651 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 NUP205Q92621 2012 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 CFAP73A6NFT4 308 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 A8MUI8 341 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 LYPLA1O75608 230 aaPredicted RBP11.61□□□□□ -0.55
CLK4-206ENST00000520878 CDK16Q00536 496 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 MPP3Q13368 585 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 ITGA9Q13797 1035 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 GEN1Q17RS7 908 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 RAP1GAP2Q684P5 730 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 LRRC8BQ6P9F7 803 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 KCNMB4Q86W47 210 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 SPATA6LQ8N4H0 392 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 TRIM62Q9BVG3 475 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 NOD2Q9HC29 1040 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 RCOR3Q9P2K3 495 aaPredicted RBP11.61□□□□□ -0.55
CLK4-206ENST00000520878 IPO11Q9UI26 975 aaKnown RBP11.61□□□□□ -0.55
CLK4-206ENST00000520878 COMMD10Q9Y6G5 202 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 OTOFQ9HC10 1997 aa11.61□□□□□ -0.55
CLK4-206ENST00000520878 TTC24A2A3L6 582 aaPredicted RBP11.6□□□□□ -0.55
CLK4-206ENST00000520878 CHUKO15111 745 aa11.6□□□□□ -0.55
CLK4-206ENST00000520878 ITGA2BP08514 1039 aa11.6□□□□□ -0.55
CLK4-206ENST00000520878 SCNN1AP37088 669 aa11.6□□□□□ -0.55
CLK4-206ENST00000520878 GP5P40197 560 aa11.6□□□□□ -0.55
CLK4-206ENST00000520878 ELF3P78545 371 aaPredicted RBP11.6□□□□□ -0.55
CLK4-206ENST00000520878 ZBTB17Q13105 803 aa11.6□□□□□ -0.55
CLK4-206ENST00000520878 DUSP4Q13115 394 aa11.6□□□□□ -0.55
CLK4-206ENST00000520878 ZRSR2Q15696 482 aaKnown RBP11.6□□□□□ -0.55
CLK4-206ENST00000520878 DLG2Q15700 870 aa11.6□□□□□ -0.55
CLK4-206ENST00000520878 AGGF1Q8N302 714 aaeCLIP11.6□□□□□ -0.55
CLK4-206ENST00000520878 DENND1AQ8TEH3 1009 aa11.6□□□□□ -0.55
CLK4-206ENST00000520878 MTBPQ96DY7 904 aa11.6□□□□□ -0.55
CLK4-206ENST00000520878 NAT9Q9BTE0 207 aa11.6□□□□□ -0.55
CLK4-206ENST00000520878 GMIPQ9P107 970 aa11.6□□□□□ -0.55
CLK4-206ENST00000520878 CHKBQ9Y259 395 aa11.6□□□□□ -0.55
CLK4-206ENST00000520878 DNAJC16Q9Y2G8 782 aa11.6□□□□□ -0.55
CLK4-206ENST00000520878 LOC100653049A0A140TA62 436 aa11.6□□□□□ -0.55
CLK4-206ENST00000520878 EIF4E1BA6NMX2 242 aaKnown RBP11.6□□□□□ -0.55
CLK4-206ENST00000520878 KRT34O76011 436 aa11.6□□□□□ -0.55
CLK4-206ENST00000520878 KRT16P08779 473 aa11.6□□□□□ -0.55
CLK4-206ENST00000520878 CTBP1Q13363 440 aa11.6□□□□□ -0.55
CLK4-206ENST00000520878 XKR4Q5GH76 650 aa11.6□□□□□ -0.55
CLK4-206ENST00000520878 CIR1Q86X95 450 aaPredicted RBP11.6□□□□□ -0.55
CLK4-206ENST00000520878 CNPY4Q8N129 248 aa11.6□□□□□ -0.55
CLK4-206ENST00000520878 SH3TC2Q8TF17 1288 aa11.6□□□□□ -0.55
CLK4-206ENST00000520878 SCLYQ96I15 445 aa11.6□□□□□ -0.55
CLK4-206ENST00000520878 TBC1D13Q9NVG8 400 aa11.6□□□□□ -0.55
CLK4-206ENST00000520878 PLLPQ9Y342 182 aa11.6□□□□□ -0.55
CLK4-206ENST00000520878 TRIM17Q9Y577 477 aa11.6□□□□□ -0.55
CLK4-206ENST00000520878 NEMP1O14524 444 aa11.6□□□□□ -0.55
CLK4-206ENST00000520878 ALADP13716 330 aa11.6□□□□□ -0.55
CLK4-206ENST00000520878 RPL17P18621 184 aaKnown RBP11.6□□□□□ -0.55
CLK4-206ENST00000520878 YWHAQP27348 245 aa11.6□□□□□ -0.55
CLK4-206ENST00000520878 CDH17Q12864 832 aa11.6□□□□□ -0.55
CLK4-206ENST00000520878 VARS2Q5ST30 1063 aaKnown RBP11.6□□□□□ -0.55
CLK4-206ENST00000520878 ZNF280DQ6N043 979 aa11.6□□□□□ -0.55
CLK4-206ENST00000520878 NUP93Q8N1F7 819 aa11.6□□□□□ -0.55
CLK4-206ENST00000520878 STMN2Q93045 179 aa11.6□□□□□ -0.55
CLK4-206ENST00000520878 WDR6Q9NNW5 1121 aaKnown RBP11.6□□□□□ -0.55
CLK4-206ENST00000520878 A0A096LPK6 155 aa11.59□□□□□ -0.55
CLK4-206ENST00000520878 DNAJC6O75061 913 aa11.59□□□□□ -0.55
CLK4-206ENST00000520878 DGKIO75912 1065 aa11.59□□□□□ -0.55
CLK4-206ENST00000520878 AMHP03971 560 aa11.59□□□□□ -0.55
CLK4-206ENST00000520878 INHAP05111 366 aa11.59□□□□□ -0.55
CLK4-206ENST00000520878 TSHRP16473 764 aa11.59□□□□□ -0.55
CLK4-206ENST00000520878 C6orf163Q5TEZ5 329 aa11.59□□□□□ -0.55
CLK4-206ENST00000520878 CFAP52Q8N1V2 620 aa11.59□□□□□ -0.55
CLK4-206ENST00000520878 TTC9BQ8N6N2 239 aa11.59□□□□□ -0.55
CLK4-206ENST00000520878 SLC2A13Q96QE2 648 aa11.59□□□□□ -0.55
CLK4-206ENST00000520878 NMUR1Q9HB89 426 aa11.59□□□□□ -0.55
CLK4-206ENST00000520878 MARCH2Q9P0N8 246 aa11.59□□□□□ -0.55
CLK4-206ENST00000520878 HCSTQ9UBK5 93 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms