RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 RBM28Q9NW13 759 aaKnown RBP6.51□□□□□ -1.37
PABPC1-216ENST00000520868 SPG21Q9NZD8 308 aa6.51□□□□□ -1.37
PABPC1-216ENST00000520868 GABBR1Q9UBS5 961 aa6.51□□□□□ -1.37
PABPC1-216ENST00000520868 SLC23A1Q9UHI7 598 aa6.51□□□□□ -1.37
PABPC1-216ENST00000520868 TCEAL9Q9UHQ7 104 aa6.51□□□□□ -1.37
PABPC1-216ENST00000520868 NAP1L2Q9ULW6 460 aaPredicted RBP6.51□□□□□ -1.37
PABPC1-216ENST00000520868 LZTS1Q9Y250 596 aa6.51□□□□□ -1.37
PABPC1-216ENST00000520868 MRFAP1Q9Y605 127 aa6.51□□□□□ -1.37
PABPC1-216ENST00000520868 COL1A2P08123 1366 aa6.51□□□□□ -1.37
PABPC1-216ENST00000520868 MYO15AQ9UKN7 3530 aa6.5□□□□□ -1.37
PABPC1-216ENST00000520868 IGLV3-22A0A075B6J6 115 aa6.5□□□□□ -1.37
PABPC1-216ENST00000520868 A0A1B0GTW7 788 aa6.5□□□□□ -1.37
PABPC1-216ENST00000520868 FSD2A1L4K1 749 aa6.5□□□□□ -1.37
PABPC1-216ENST00000520868 KLHL33A6NCF5 533 aa6.5□□□□□ -1.37
PABPC1-216ENST00000520868 C2CD4DB7Z1M9 353 aa6.5□□□□□ -1.37
PABPC1-216ENST00000520868 IPO5O00410 1097 aaKnown RBP6.5□□□□□ -1.37
PABPC1-216ENST00000520868 ADAMTS3O15072 1205 aa6.5□□□□□ -1.37
PABPC1-216ENST00000520868 ZBTB43O43298 467 aa6.5□□□□□ -1.37
PABPC1-216ENST00000520868 NDUFS2O75306 463 aa6.5□□□□□ -1.37
PABPC1-216ENST00000520868 CSDE1O75534 798 aaKnown RBP6.5□□□□□ -1.37
PABPC1-216ENST00000520868 C22orf31O95567 290 aa6.5□□□□□ -1.37
PABPC1-216ENST00000520868 CXCL14O95715 111 aa6.5□□□□□ -1.37
PABPC1-216ENST00000520868 LMNAP02545 664 aaKnown RBP6.5□□□□□ -1.37
PABPC1-216ENST00000520868 AMY1AP04745 511 aa6.5□□□□□ -1.37
PABPC1-216ENST00000520868 HOXB8P17481 243 aaPredicted RBP6.5□□□□□ -1.37
PABPC1-216ENST00000520868 METAP2P50579 478 aaKnown RBP eCLIP6.5□□□□□ -1.373e-26■□□□□ 8.5
PABPC1-216ENST00000520868 GUCY2FP51841 1108 aa6.5□□□□□ -1.37
PABPC1-216ENST00000520868 NANOS3P60323 173 aaKnown RBP6.5□□□□□ -1.37
PABPC1-216ENST00000520868 KRT85P78386 507 aa6.5□□□□□ -1.37
PABPC1-216ENST00000520868 SMC1AQ14683 1233 aaKnown RBP6.5□□□□□ -1.37
PABPC1-216ENST00000520868 ACAP2Q15057 778 aa6.5□□□□□ -1.37
PABPC1-216ENST00000520868 LONRF3Q496Y0 759 aa6.5□□□□□ -1.37
PABPC1-216ENST00000520868 CLLU1OSQ5K130 101 aa6.5□□□□□ -1.37
PABPC1-216ENST00000520868 RARS2Q5T160 578 aaKnown RBP6.5□□□□□ -1.37
PABPC1-216ENST00000520868 CES5AQ6NT32 575 aa6.5□□□□□ -1.37
PABPC1-216ENST00000520868 FOXR2Q6PJQ5 311 aa6.5□□□□□ -1.37
PABPC1-216ENST00000520868 APOA5Q6Q788 366 aa6.5□□□□□ -1.37
PABPC1-216ENST00000520868 FAM43BQ6ZT52 329 aaPredicted RBP6.5□□□□□ -1.37
PABPC1-216ENST00000520868 NIPA1Q7RTP0 329 aa6.5□□□□□ -1.37
PABPC1-216ENST00000520868 ECHDC2Q86YB7 292 aa6.5□□□□□ -1.37
PABPC1-216ENST00000520868 C12orf76Q8N812 135 aaPredicted RBP6.5□□□□□ -1.37
PABPC1-216ENST00000520868 MRPL43Q8N983 215 aaKnown RBP6.5□□□□□ -1.37
PABPC1-216ENST00000520868 NLGN4YQ8NFZ3 816 aaPredicted RBP6.5□□□□□ -1.37
PABPC1-216ENST00000520868 CASP10Q92851 521 aa6.5□□□□□ -1.37
PABPC1-216ENST00000520868 CAVIN3Q969G5 261 aa6.5□□□□□ -1.37
PABPC1-216ENST00000520868 HDAC10Q969S8 669 aa6.5□□□□□ -1.37
PABPC1-216ENST00000520868 FAXDC2Q96IV6 333 aa6.5□□□□□ -1.37
PABPC1-216ENST00000520868 MAP7D2Q96T17 732 aa6.5□□□□□ -1.37
PABPC1-216ENST00000520868 GLT8D2Q9H1C3 349 aa6.5□□□□□ -1.37
PABPC1-216ENST00000520868 SMOC2Q9H3U7 446 aa6.5□□□□□ -1.37
PABPC1-216ENST00000520868 POMKQ9H5K3 350 aa6.5□□□□□ -1.37
PABPC1-216ENST00000520868 TBC1D22BQ9NU19 505 aa6.5□□□□□ -1.37
PABPC1-216ENST00000520868 BARHL2Q9NY43 387 aa6.5□□□□□ -1.37
PABPC1-216ENST00000520868 PCDHA10Q9Y5I2 948 aa6.5□□□□□ -1.37
PABPC1-216ENST00000520868 LOXHD1Q8IVV2 1947 aa6.49□□□□□ -1.37
PABPC1-216ENST00000520868 KIAA1671Q9BY89 1806 aa6.49□□□□□ -1.37
PABPC1-216ENST00000520868 KLF18A0A0U1RQI7 1052 aa6.49□□□□□ -1.37
PABPC1-216ENST00000520868 ALG1L2C9J202 215 aa6.49□□□□□ -1.37
PABPC1-216ENST00000520868 hCG_1984214I3L0E3 225 aa6.49□□□□□ -1.37
PABPC1-216ENST00000520868 MAGEB2O15479 319 aa6.49□□□□□ -1.37
PABPC1-216ENST00000520868 SPDEFO95238 335 aa6.49□□□□□ -1.37
PABPC1-216ENST00000520868 MT-CO1P00395 513 aa6.49□□□□□ -1.37
PABPC1-216ENST00000520868 CYP3A4P08684 503 aa6.49□□□□□ -1.37
PABPC1-216ENST00000520868 TMOD1P28289 359 aa6.49□□□□□ -1.37
PABPC1-216ENST00000520868 PPM1AP35813 382 aa6.49□□□□□ -1.37
PABPC1-216ENST00000520868 ALDH7A1P49419 539 aaKnown RBP6.49□□□□□ -1.37
PABPC1-216ENST00000520868 EXOSC10Q01780 885 aaKnown RBP6.49□□□□□ -1.37
PABPC1-216ENST00000520868 TP53BP2Q13625 1128 aa6.49□□□□□ -1.37
PABPC1-216ENST00000520868 PRR16Q569H4 304 aa6.49□□□□□ -1.37
PABPC1-216ENST00000520868 ASCL5Q7RTU5 278 aa6.49□□□□□ -1.37
PABPC1-216ENST00000520868 SLC39A11Q8N1S5 342 aa6.49□□□□□ -1.37
PABPC1-216ENST00000520868 LRRC43Q8N309 656 aa6.49□□□□□ -1.37
PABPC1-216ENST00000520868 FITM2Q8N6M3 262 aa6.49□□□□□ -1.37
PABPC1-216ENST00000520868 ZNF713Q8N859 430 aaPredicted RBP6.49□□□□□ -1.37
PABPC1-216ENST00000520868 TMEM105Q8N8V8 129 aa6.49□□□□□ -1.37
PABPC1-216ENST00000520868 JADE3Q92613 823 aa6.49□□□□□ -1.37
PABPC1-216ENST00000520868 BOD1Q96IK1 185 aa6.49□□□□□ -1.37
PABPC1-216ENST00000520868 SCLT1Q96NL6 688 aa6.49□□□□□ -1.37
PABPC1-216ENST00000520868 ALOXE3Q9BYJ1 711 aa6.49□□□□□ -1.37
PABPC1-216ENST00000520868 NRBP2Q9NSY0 501 aa6.49□□□□□ -1.37
PABPC1-216ENST00000520868 TDP1Q9NUW8 608 aa6.49□□□□□ -1.37
PABPC1-216ENST00000520868 FBXO34Q9NWN3 711 aa6.49□□□□□ -1.37
PABPC1-216ENST00000520868 SYBUQ9NX95 663 aa6.49□□□□□ -1.37
PABPC1-216ENST00000520868 KCNE5Q9UJ90 142 aa6.49□□□□□ -1.37
PABPC1-216ENST00000520868 TRHDEQ9UKU6 1024 aa6.49□□□□□ -1.37
PABPC1-216ENST00000520868 RUVBL1Q9Y265 456 aaKnown RBP6.49□□□□□ -1.37
PABPC1-216ENST00000520868 CFAP54Q96N23 3096 aa6.49□□□□□ -1.37
PABPC1-216ENST00000520868 PLXNA4Q9HCM2 1894 aa6.49□□□□□ -1.37
PABPC1-216ENST00000520868 RIF1Q5UIP0 2472 aaKnown RBP6.48□□□□□ -1.37
PABPC1-216ENST00000520868 A0A0U1RQF3 1178 aa6.48□□□□□ -1.37
PABPC1-216ENST00000520868 CHMP2AO43633 222 aa6.48□□□□□ -1.37
PABPC1-216ENST00000520868 GPANK1O95872 356 aa6.48□□□□□ -1.37
PABPC1-216ENST00000520868 ELANEP08246 267 aa6.48□□□□□ -1.37
PABPC1-216ENST00000520868 MYBL2P10244 700 aa6.48□□□□□ -1.37
PABPC1-216ENST00000520868 EGR2P11161 476 aaPredicted RBP6.48□□□□□ -1.37
PABPC1-216ENST00000520868 DARSP14868 501 aaKnown RBP6.48□□□□□ -1.37
PABPC1-216ENST00000520868 EPCAMP16422 314 aa6.48□□□□□ -1.37
PABPC1-216ENST00000520868 BMP5P22003 454 aa6.48□□□□□ -1.37
PABPC1-216ENST00000520868 ADRA1BP35368 520 aa6.48□□□□□ -1.37
PABPC1-216ENST00000520868 MTHFRP42898 656 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms