RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 CYS1Q717R9 158 aa18.91■□□□□ 0.62
FAM49B-214ENST00000519540 CPLX4Q7Z7G2 160 aa18.91■□□□□ 0.62
FAM49B-214ENST00000519540 SLC26A11Q86WA9 606 aa18.91■□□□□ 0.62
FAM49B-214ENST00000519540 LRRC6Q86X45 466 aa18.91■□□□□ 0.62
FAM49B-214ENST00000519540 ATPAF2Q8N5M1 289 aa18.91■□□□□ 0.62
FAM49B-214ENST00000519540 ANKLE1Q8NAG6 615 aa18.91■□□□□ 0.62
FAM49B-214ENST00000519540 DENND1AQ8TEH3 1009 aa18.91■□□□□ 0.62
FAM49B-214ENST00000519540 ARNTL2Q8WYA1 636 aa18.91■□□□□ 0.62
FAM49B-214ENST00000519540 SGSM3Q96HU1 749 aa18.91■□□□□ 0.62
FAM49B-214ENST00000519540 BTN2A3PQ96KV6 586 aa18.91■□□□□ 0.62
FAM49B-214ENST00000519540 SSU72Q9NP77 194 aaKnown RBP18.91■□□□□ 0.62
FAM49B-214ENST00000519540 SMYD2Q9NRG4 433 aa18.91■□□□□ 0.62
FAM49B-214ENST00000519540 PIH1D1Q9NWS0 290 aaKnown RBP18.91■□□□□ 0.62
FAM49B-214ENST00000519540 VANGL2Q9ULK5 521 aa18.91■□□□□ 0.62
FAM49B-214ENST00000519540 MAGED2Q9UNF1 606 aaPredicted RBP18.91■□□□□ 0.62
FAM49B-214ENST00000519540 SMG5Q9UPR3 1016 aaKnown RBP18.91■□□□□ 0.62
FAM49B-214ENST00000519540 LTBP2Q14767 1821 aa18.91■□□□□ 0.62
FAM49B-214ENST00000519540 IQANK1A0A1B0GTG1 560 aa18.9■□□□□ 0.62
FAM49B-214ENST00000519540 ARHGAP42A6NI28 874 aa18.9■□□□□ 0.62
FAM49B-214ENST00000519540 ERI2A8K979 691 aaKnown RBP18.9■□□□□ 0.62
FAM49B-214ENST00000519540 TYROBPO43914 113 aa18.9■□□□□ 0.62
FAM49B-214ENST00000519540 MAFKO60675 156 aa18.9■□□□□ 0.62
FAM49B-214ENST00000519540 IGLV3-27P01718 113 aa18.9■□□□□ 0.62
FAM49B-214ENST00000519540 SOD2P04179 222 aa18.9■□□□□ 0.62
FAM49B-214ENST00000519540 KRT4P19013 534 aa18.9■□□□□ 0.62
FAM49B-214ENST00000519540 CRADDP78560 199 aa18.9■□□□□ 0.62
FAM49B-214ENST00000519540 DEFB103AP81534 67 aa18.9■□□□□ 0.62
FAM49B-214ENST00000519540 STEAP4Q687X5 459 aa18.9■□□□□ 0.62
FAM49B-214ENST00000519540 FAM117BQ6P1L5 589 aa18.9■□□□□ 0.62
FAM49B-214ENST00000519540 TRMT10BQ6PF06 316 aaKnown RBP18.9■□□□□ 0.62
FAM49B-214ENST00000519540 FBXO46Q6PJ61 603 aaPredicted RBP18.9■□□□□ 0.62
FAM49B-214ENST00000519540 CCNJLQ8IV13 435 aa18.9■□□□□ 0.62
FAM49B-214ENST00000519540 CTAGE3PQ8IX95 158 aa18.9■□□□□ 0.62
FAM49B-214ENST00000519540 CNTD1Q8N815 330 aa18.9■□□□□ 0.62
FAM49B-214ENST00000519540 PPM1NQ8N819 430 aa18.9■□□□□ 0.62
FAM49B-214ENST00000519540 CKAP2Q8WWK9 683 aa18.9■□□□□ 0.62
FAM49B-214ENST00000519540 MLPHQ9BV36 600 aaPredicted RBP18.9■□□□□ 0.62
FAM49B-214ENST00000519540 C11orf49Q9H6J7 331 aa18.9■□□□□ 0.62
FAM49B-214ENST00000519540 CCSER2Q9H7U1 834 aa18.9■□□□□ 0.62
FAM49B-214ENST00000519540 PRDM5Q9NQX1 630 aaPredicted RBP18.9■□□□□ 0.62
FAM49B-214ENST00000519540 MOCS1Q9NZB8 636 aa18.9■□□□□ 0.62
FAM49B-214ENST00000519540 MRPL42Q9Y6G3 142 aaKnown RBP18.9■□□□□ 0.62
FAM49B-214ENST00000519540 SLC12A8A0AV02 714 aa18.9■□□□□ 0.62
FAM49B-214ENST00000519540 TIMP1P01033 207 aa18.9■□□□□ 0.62
FAM49B-214ENST00000519540 CCNB1P14635 433 aa18.9■□□□□ 0.62
FAM49B-214ENST00000519540 CASC4Q6P4E1 433 aa18.9■□□□□ 0.62
FAM49B-214ENST00000519540 TAX1BP1Q86VP1 789 aa18.9■□□□□ 0.62
FAM49B-214ENST00000519540 SLC39A11Q8N1S5 342 aa18.9■□□□□ 0.62
FAM49B-214ENST00000519540 GDAP1Q8TB36 358 aa18.9■□□□□ 0.62
FAM49B-214ENST00000519540 ARMC5Q96C12 935 aa18.9■□□□□ 0.62
FAM49B-214ENST00000519540 ZNF558Q96NG5 402 aa18.9■□□□□ 0.62
FAM49B-214ENST00000519540 RC3H2Q9HBD1 1191 aaKnown RBP18.9■□□□□ 0.62
FAM49B-214ENST00000519540 FNIP2Q9P278 1114 aa18.9■□□□□ 0.62
FAM49B-214ENST00000519540 PPARGC1AQ9UBK2 798 aaKnown RBP18.9■□□□□ 0.62
FAM49B-214ENST00000519540 AFF4Q9UHB7 1163 aaKnown RBP18.9■□□□□ 0.62
FAM49B-214ENST00000519540 FAM159BA6NKW6 160 aa18.89■□□□□ 0.61
FAM49B-214ENST00000519540 MATN3O15232 486 aa18.89■□□□□ 0.61
FAM49B-214ENST00000519540 TLR5O60602 858 aa18.89■□□□□ 0.61
FAM49B-214ENST00000519540 ABLIM3O94929 683 aa18.89■□□□□ 0.61
FAM49B-214ENST00000519540 HMBSP08397 361 aa18.89■□□□□ 0.61
FAM49B-214ENST00000519540 CSF2RAP15509 400 aa18.89■□□□□ 0.61
FAM49B-214ENST00000519540 WDR4P57081 412 aaKnown RBP18.89■□□□□ 0.61
FAM49B-214ENST00000519540 RING1Q06587 406 aa18.89■□□□□ 0.61
FAM49B-214ENST00000519540 OLIG2Q13516 323 aa18.89■□□□□ 0.61
FAM49B-214ENST00000519540 NUGGCQ68CJ6 796 aa18.89■□□□□ 0.61
FAM49B-214ENST00000519540 LRRC34Q8IZ02 419 aa18.89■□□□□ 0.61
FAM49B-214ENST00000519540 OR52K1Q8NGK4 314 aa18.89■□□□□ 0.61
FAM49B-214ENST00000519540 ZNF461Q8TAF7 563 aa18.89■□□□□ 0.61
FAM49B-214ENST00000519540 NAT9Q9BTE0 207 aa18.89■□□□□ 0.61
FAM49B-214ENST00000519540 ZYG11BQ9C0D3 744 aa18.89■□□□□ 0.61
FAM49B-214ENST00000519540 ZNF180Q9UJW8 692 aa18.89■□□□□ 0.61
FAM49B-214ENST00000519540 IGLV3-10A0A075B6K4 115 aa18.88■□□□□ 0.61
FAM49B-214ENST00000519540 TRIM43BA6NCK2 446 aa18.88■□□□□ 0.61
FAM49B-214ENST00000519540 CACNG3O60359 315 aa18.88■□□□□ 0.61
FAM49B-214ENST00000519540 FAM155BO75949 473 aa18.88■□□□□ 0.61
FAM49B-214ENST00000519540 ALDH1A2O94788 518 aa18.88■□□□□ 0.61
FAM49B-214ENST00000519540 SEC24AO95486 1093 aa18.88■□□□□ 0.61
FAM49B-214ENST00000519540 RHOQP17081 205 aa18.88■□□□□ 0.61
FAM49B-214ENST00000519540 RPA3P35244 121 aaPredicted RBP18.88■□□□□ 0.61
FAM49B-214ENST00000519540 DSG1Q02413 1049 aa18.88■□□□□ 0.61
FAM49B-214ENST00000519540 LRRC49Q8IUZ0 686 aa18.88■□□□□ 0.61
FAM49B-214ENST00000519540 UMODL1-AS1Q8N2C9 162 aa18.88■□□□□ 0.61
FAM49B-214ENST00000519540 USP33Q8TEY7 942 aa18.88■□□□□ 0.61
FAM49B-214ENST00000519540 TRIM43Q96BQ3 446 aaPredicted RBP18.88■□□□□ 0.61
FAM49B-214ENST00000519540 OXNAD1Q96HP4 312 aaPredicted RBP18.88■□□□□ 0.61
FAM49B-214ENST00000519540 IL12RB2Q99665 862 aa18.88■□□□□ 0.61
FAM49B-214ENST00000519540 NOL6Q9H6R4 1146 aaKnown RBP18.88■□□□□ 0.61
FAM49B-214ENST00000519540 CASS4Q9NQ75 786 aa18.88■□□□□ 0.61
FAM49B-214ENST00000519540 SYBUQ9NX95 663 aa18.88■□□□□ 0.61
FAM49B-214ENST00000519540 USP12O75317 370 aa18.88■□□□□ 0.61
FAM49B-214ENST00000519540 MT-ND3P03897 115 aa18.88■□□□□ 0.61
FAM49B-214ENST00000519540 PGAM1P18669 254 aa18.88■□□□□ 0.61
FAM49B-214ENST00000519540 CA4P22748 312 aa18.88■□□□□ 0.61
FAM49B-214ENST00000519540 PAPOLAP51003 745 aaKnown RBP18.88■□□□□ 0.61
FAM49B-214ENST00000519540 ZNF276Q8N554 614 aa18.88■□□□□ 0.61
FAM49B-214ENST00000519540 TMEM169Q96HH4 297 aa18.88■□□□□ 0.61
FAM49B-214ENST00000519540 TMEM248Q9NWD8 314 aa18.88■□□□□ 0.61
FAM49B-214ENST00000519540 HSFX1Q9UBD0 423 aa18.88■□□□□ 0.61
FAM49B-214ENST00000519540 CNTN5O94779 1100 aa18.87■□□□□ 0.61
FAM49B-214ENST00000519540 ASMTLO95671 621 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms