RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 KIAA1468Q9P260 1216 aa11.22□□□□□ -0.61
PVT1-208ENST00000519481 ADAMTS1Q9UHI8 967 aa11.22□□□□□ -0.61
PVT1-208ENST00000519481 XPO7Q9UIA9 1087 aaKnown RBP11.22□□□□□ -0.61
PVT1-208ENST00000519481 SLCO3A1Q9UIG8 710 aa11.22□□□□□ -0.61
PVT1-208ENST00000519481 SLC25A13Q9UJS0 675 aa11.22□□□□□ -0.61
PVT1-208ENST00000519481 MUC22E2RYF6 1773 aaPredicted RBP11.21□□□□□ -0.61
PVT1-208ENST00000519481 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.21□□□□□ -0.61
PVT1-208ENST00000519481 GTPBP10A4D1E9 387 aaKnown RBP11.21□□□□□ -0.61
PVT1-208ENST00000519481 H0Y8X5 98 aa11.21□□□□□ -0.61
PVT1-208ENST00000519481 KCNK3O14649 394 aa11.21□□□□□ -0.61
PVT1-208ENST00000519481 IGLV3-25P01717 112 aa11.21□□□□□ -0.61
PVT1-208ENST00000519481 IGHV4-34P06331 123 aa11.21□□□□□ -0.61
PVT1-208ENST00000519481 ATXN1LP0C7T5 689 aaKnown RBP11.21□□□□□ -0.61
PVT1-208ENST00000519481 SLC9A1P19634 815 aa11.21□□□□□ -0.61
PVT1-208ENST00000519481 CD38P28907 300 aa11.21□□□□□ -0.61
PVT1-208ENST00000519481 CCR5P51681 352 aa11.21□□□□□ -0.61
PVT1-208ENST00000519481 BPIFB4P59827 614 aa11.21□□□□□ -0.61
PVT1-208ENST00000519481 UBE2HP62256 183 aa11.21□□□□□ -0.61
PVT1-208ENST00000519481 ZNF177Q13360 481 aaPredicted RBP11.21□□□□□ -0.61
PVT1-208ENST00000519481 ELAVL3Q14576 367 aaKnown RBP11.21□□□□□ -0.61
PVT1-208ENST00000519481 ACCSLQ4AC99 568 aa11.21□□□□□ -0.61
PVT1-208ENST00000519481 FAM46CQ5VWP2 391 aa11.21□□□□□ -0.61
PVT1-208ENST00000519481 GJB7Q6PEY0 223 aa11.21□□□□□ -0.61
PVT1-208ENST00000519481 LAYNQ6UX15 382 aa11.21□□□□□ -0.61
PVT1-208ENST00000519481 C11orf57Q6ZUT1 292 aaPredicted RBP11.21□□□□□ -0.61
PVT1-208ENST00000519481 PRPF39Q86UA1 669 aaKnown RBP11.21□□□□□ -0.61
PVT1-208ENST00000519481 PROSER1Q86XN7 944 aa11.21□□□□□ -0.61
PVT1-208ENST00000519481 PASD1Q8IV76 773 aa11.21□□□□□ -0.61
PVT1-208ENST00000519481 FAM114A1Q8IWE2 563 aa11.21□□□□□ -0.61
PVT1-208ENST00000519481 APCDD1Q8J025 514 aa11.21□□□□□ -0.61
PVT1-208ENST00000519481 BAHD1Q8TBE0 780 aaPredicted RBP11.21□□□□□ -0.61
PVT1-208ENST00000519481 OR8D1Q8WZ84 308 aa11.21□□□□□ -0.61
PVT1-208ENST00000519481 SHC3Q92529 594 aa11.21□□□□□ -0.61
PVT1-208ENST00000519481 SLC6A18Q96N87 628 aa11.21□□□□□ -0.61
PVT1-208ENST00000519481 SLC2A13Q96QE2 648 aa11.21□□□□□ -0.61
PVT1-208ENST00000519481 SPAG5Q96R06 1193 aa11.21□□□□□ -0.61
PVT1-208ENST00000519481 PDCL3Q9H2J4 239 aa11.21□□□□□ -0.61
PVT1-208ENST00000519481 ACP6Q9NPH0 428 aa11.21□□□□□ -0.61
PVT1-208ENST00000519481 RRN3Q9NYV6 651 aa11.21□□□□□ -0.61
PVT1-208ENST00000519481 FTSJ1Q9UET6 329 aa11.21□□□□□ -0.61
PVT1-208ENST00000519481 SERGEFQ9UGK8 458 aa11.21□□□□□ -0.61
PVT1-208ENST00000519481 CYTH4Q9UIA0 394 aa11.21□□□□□ -0.61
PVT1-208ENST00000519481 PCDHGC3Q9UN70 934 aa11.21□□□□□ -0.61
PVT1-208ENST00000519481 SLCO1B1Q9Y6L6 691 aa11.21□□□□□ -0.61
PVT1-208ENST00000519481 TBC1D3DA0A087WVF3 549 aa11.2□□□□□ -0.62
PVT1-208ENST00000519481 TBC1D3IA0A087WXS9 549 aa11.2□□□□□ -0.62
PVT1-208ENST00000519481 TBC1D3EA0A087X179 549 aa11.2□□□□□ -0.62
PVT1-208ENST00000519481 TBC1D3KA0A087X1G2 549 aa11.2□□□□□ -0.62
PVT1-208ENST00000519481 A0A1B0GTQ1 180 aa11.2□□□□□ -0.62
PVT1-208ENST00000519481 TBC1D3FA6NER0 549 aaPredicted RBP11.2□□□□□ -0.62
PVT1-208ENST00000519481 BECN2A8MW95 431 aa11.2□□□□□ -0.62
PVT1-208ENST00000519481 TBC1D3LB9A6J9 549 aa11.2□□□□□ -0.62
PVT1-208ENST00000519481 C1QTNF3-AMACRE9PGA6 284 aa11.2□□□□□ -0.62
PVT1-208ENST00000519481 YKT6O15498 198 aa11.2□□□□□ -0.62
PVT1-208ENST00000519481 MAGEC1O60732 1142 aa11.2□□□□□ -0.62
PVT1-208ENST00000519481 ITGAVP06756 1048 aa11.2□□□□□ -0.62
PVT1-208ENST00000519481 TBC1D3HP0C7X1 549 aa11.2□□□□□ -0.62
PVT1-208ENST00000519481 ZNF18P17022 549 aa11.2□□□□□ -0.62
PVT1-208ENST00000519481 MZF1P28698 734 aaPredicted RBP11.2□□□□□ -0.62
PVT1-208ENST00000519481 NOS2P35228 1153 aa11.2□□□□□ -0.62
PVT1-208ENST00000519481 NUDT1P36639 197 aa11.2□□□□□ -0.62
PVT1-208ENST00000519481 STK19P49842 368 aaPredicted RBP11.2□□□□□ -0.62
PVT1-208ENST00000519481 PLK1P53350 603 aa11.2□□□□□ -0.62
PVT1-208ENST00000519481 PITX1P78337 314 aaPredicted RBP11.2□□□□□ -0.62
PVT1-208ENST00000519481 NME3Q13232 169 aa11.2□□□□□ -0.62
PVT1-208ENST00000519481 TAF5Q15542 800 aa11.2□□□□□ -0.62
PVT1-208ENST00000519481 CAMK4Q16566 473 aa11.2□□□□□ -0.62
PVT1-208ENST00000519481 CCDC157Q569K6 752 aa11.2□□□□□ -0.62
PVT1-208ENST00000519481 TBC1D3GQ6DHY5 549 aa11.2□□□□□ -0.62
PVT1-208ENST00000519481 TBC1D3CQ6IPX1 549 aa11.2□□□□□ -0.62
PVT1-208ENST00000519481 TMPRSS7Q7RTY8 843 aa11.2□□□□□ -0.62
PVT1-208ENST00000519481 CIR1Q86X95 450 aaPredicted RBP11.2□□□□□ -0.62
PVT1-208ENST00000519481 TBC1D3Q8IZP1 549 aaPredicted RBP11.2□□□□□ -0.62
PVT1-208ENST00000519481 OXR1Q8N573 874 aa11.2□□□□□ -0.62
PVT1-208ENST00000519481 MLKLQ8NB16 471 aa11.2□□□□□ -0.62
PVT1-208ENST00000519481 PTPRN2Q92932 1015 aa11.2□□□□□ -0.62
PVT1-208ENST00000519481 SERAC1Q96JX3 654 aa11.2□□□□□ -0.62
PVT1-208ENST00000519481 CPXM1Q96SM3 734 aa11.2□□□□□ -0.62
PVT1-208ENST00000519481 FAM129BQ96TA1 746 aa11.2□□□□□ -0.62
PVT1-208ENST00000519481 ELF4Q99607 663 aaPredicted RBP11.2□□□□□ -0.62
PVT1-208ENST00000519481 KDM4CQ9H3R0 1056 aa11.2□□□□□ -0.62
PVT1-208ENST00000519481 GDF3Q9NR23 364 aa11.2□□□□□ -0.62
PVT1-208ENST00000519481 TMEM51Q9NW97 253 aa11.2□□□□□ -0.62
PVT1-208ENST00000519481 RALYQ9UKM9 306 aaKnown RBP11.2□□□□□ -0.62
PVT1-208ENST00000519481 LHX6Q9UPM6 363 aa11.2□□□□□ -0.62
PVT1-208ENST00000519481 BTBD3Q9Y2F9 522 aa11.2□□□□□ -0.62
PVT1-208ENST00000519481 FARP1Q9Y4F1 1045 aaPredicted RBP11.2□□□□□ -0.62
PVT1-208ENST00000519481 PAXBP1Q9Y5B6 917 aa11.2□□□□□ -0.62
PVT1-208ENST00000519481 PKD1L2Q7Z442 2459 aa11.2□□□□□ -0.62
PVT1-208ENST00000519481 ANKRD11Q6UB99 2663 aaPredicted RBP11.2□□□□□ -0.62
PVT1-208ENST00000519481 M0QYT0 321 aa11.19□□□□□ -0.62
PVT1-208ENST00000519481 SLC7A4O43246 635 aa11.19□□□□□ -0.62
PVT1-208ENST00000519481 CLDN11O75508 207 aa11.19□□□□□ -0.62
PVT1-208ENST00000519481 DAB1O75553 588 aa11.19□□□□□ -0.62
PVT1-208ENST00000519481 GRAP2O75791 330 aa11.19□□□□□ -0.62
PVT1-208ENST00000519481 PRKCSHP14314 528 aaPredicted RBP11.19□□□□□ -0.62
PVT1-208ENST00000519481 PON1P27169 355 aa11.19□□□□□ -0.62
PVT1-208ENST00000519481 ARRB1P49407 418 aaPredicted RBP11.19□□□□□ -0.62
PVT1-208ENST00000519481 VASPP50552 380 aaPredicted RBP11.19□□□□□ -0.62
PVT1-208ENST00000519481 ADPRHP54922 357 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms